RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 TMEM254Q8TBM7 123 aa7.21□□□□□ -1.26
EWSR1-217ENST00000483415 HTN3P15516 51 aa7.2□□□□□ -1.26
EWSR1-217ENST00000483415 DNAH7Q8WXX0 4024 aa7.2□□□□□ -1.26
EWSR1-217ENST00000483415 IGHV3OR16-9A0A0B4J2B5 98 aa7.2□□□□□ -1.26
EWSR1-217ENST00000483415 PMAIP1Q13794 54 aa7.2□□□□□ -1.26
EWSR1-217ENST00000483415 HAMPP81172 84 aa7.2□□□□□ -1.26
EWSR1-217ENST00000483415 NREPQ16612 68 aa7.19□□□□□ -1.26
EWSR1-217ENST00000483415 LINC00588Q9Y4M8 146 aa7.18□□□□□ -1.26
EWSR1-217ENST00000483415 A0A087WZ39 114 aa7.18□□□□□ -1.26
EWSR1-217ENST00000483415 ZNF561-AS1K7EIQ3 104 aa7.18□□□□□ -1.26
EWSR1-217ENST00000483415 PRR3P79522 188 aaKnown RBP7.18□□□□□ -1.26
EWSR1-217ENST00000483415 C6orf226Q5I0X4 101 aa7.18□□□□□ -1.26
EWSR1-217ENST00000483415 LINC00575Q6W349 94 aa7.16□□□□□ -1.26
EWSR1-217ENST00000483415 ALMS1Q8TCU4 4167 aa7.16□□□□□ -1.26
EWSR1-217ENST00000483415 PRYO14603 147 aa7.15□□□□□ -1.26
EWSR1-217ENST00000483415 BPY2O14599 106 aa7.15□□□□□ -1.27
EWSR1-217ENST00000483415 OCR1Q9BZK8 76 aa7.14□□□□□ -1.27
EWSR1-217ENST00000483415 PRKDCP78527 4128 aaKnown RBP7.14□□□□□ -1.27
EWSR1-217ENST00000483415 LINC00959A0A1B0GUT2 108 aa7.14□□□□□ -1.27
EWSR1-217ENST00000483415 IGLV4-60A0A075B6I1 120 aa7.14□□□□□ -1.27
EWSR1-217ENST00000483415 CD164L2Q6UWJ8 174 aa7.14□□□□□ -1.27
EWSR1-217ENST00000483415 Q1T7F1 81 aa7.13□□□□□ -1.27
EWSR1-217ENST00000483415 Q8NDZ9 215 aa7.13□□□□□ -1.27
EWSR1-217ENST00000483415 FUSP35637 526 aaKnown RBP eCLIP7.13□□□□□ -1.272e-6■■□□□ 12.8
EWSR1-217ENST00000483415 NBEAL1Q6ZS30 2694 aa7.13□□□□□ -1.27
EWSR1-217ENST00000483415 REG3AQ06141 175 aa7.12□□□□□ -1.27
EWSR1-217ENST00000483415 C6orf99Q4VX62 202 aa7.12□□□□□ -1.27
EWSR1-217ENST00000483415 CASC10Q5T4H9 136 aa7.12□□□□□ -1.27
EWSR1-217ENST00000483415 SCXQ7RTU7 201 aa7.12□□□□□ -1.27
EWSR1-217ENST00000483415 LAMTOR3Q9UHA4 124 aa7.12□□□□□ -1.27
EWSR1-217ENST00000483415 MGAM2Q2M2H8 2515 aa7.12□□□□□ -1.27
EWSR1-217ENST00000483415 hDV103S1A0JD37 113 aa7.12□□□□□ -1.27
EWSR1-217ENST00000483415 PDE6GP18545 87 aa7.12□□□□□ -1.27
EWSR1-217ENST00000483415 Q6ZRP5 223 aa7.12□□□□□ -1.27
EWSR1-217ENST00000483415 WFDC10BQ8IUB3 73 aa7.12□□□□□ -1.27
EWSR1-217ENST00000483415 KRTAP26-1Q6PEX3 210 aa7.11□□□□□ -1.27
EWSR1-217ENST00000483415 IGKV3OR2-268A0A0C4DH90 116 aa7.1□□□□□ -1.27
EWSR1-217ENST00000483415 UBE2DNLQ8IWF7 75 aa7.1□□□□□ -1.27
EWSR1-217ENST00000483415 ANGP03950 147 aaKnown RBP7.1□□□□□ -1.27
EWSR1-217ENST00000483415 IGKV4-1P06312 121 aa7.09□□□□□ -1.27
EWSR1-217ENST00000483415 CD164Q04900 197 aa7.09□□□□□ -1.27
EWSR1-217ENST00000483415 Q8IZM0 81 aa7.09□□□□□ -1.27
EWSR1-217ENST00000483415 Q6ZR54 194 aa7.09□□□□□ -1.27
EWSR1-217ENST00000483415 DNAH1Q9P2D7 4330 aa7.08□□□□□ -1.28
EWSR1-217ENST00000483415 NBDYA0A0U1RRE5 68 aa7.08□□□□□ -1.28
EWSR1-217ENST00000483415 HIGD2AQ9BW72 106 aa7.08□□□□□ -1.28
EWSR1-217ENST00000483415 MEGF8Q7Z7M0 2845 aa7.08□□□□□ -1.28
EWSR1-217ENST00000483415 LINC00269Q8N2A0 174 aa7.08□□□□□ -1.28
EWSR1-217ENST00000483415 LINC00476Q8WZB0 136 aa7.08□□□□□ -1.28
EWSR1-217ENST00000483415 CHCHD10Q8WYQ3 142 aaPredicted RBP7.07□□□□□ -1.28
EWSR1-217ENST00000483415 VPS13DQ5THJ4 4388 aa7.07□□□□□ -1.28
EWSR1-217ENST00000483415 C14orf177Q52M58 125 aa7.06□□□□□ -1.28
EWSR1-217ENST00000483415 LCE6AA0A183 80 aa7.06□□□□□ -1.28
EWSR1-217ENST00000483415 TENM3Q9P273 2699 aa7.06□□□□□ -1.28
EWSR1-217ENST00000483415 GVQW2A0A096LPI5 108 aaPredicted RBP7.06□□□□□ -1.28
EWSR1-217ENST00000483415 COX17Q14061 63 aa7.06□□□□□ -1.28
EWSR1-217ENST00000483415 KLK12Q9UKR0 248 aa7.06□□□□□ -1.28
EWSR1-217ENST00000483415 KIAA0087Q14695 138 aa7.05□□□□□ -1.28
EWSR1-217ENST00000483415 Q6ZQY7 126 aa7.05□□□□□ -1.28
EWSR1-217ENST00000483415 Q8N9L7 120 aa7.05□□□□□ -1.28
EWSR1-217ENST00000483415 H3BQ85 93 aa7.05□□□□□ -1.28
EWSR1-217ENST00000483415 NOTCH1P46531 2555 aa7.05□□□□□ -1.28
EWSR1-217ENST00000483415 C1orf64Q8NEQ6 169 aa7.04□□□□□ -1.28
EWSR1-217ENST00000483415 IGLV6-57P01721 117 aa7.03□□□□□ -1.28
EWSR1-217ENST00000483415 LRCOL1A6NCL2 159 aa7.03□□□□□ -1.28
EWSR1-217ENST00000483415 COL7A1Q02388 2944 aa7.02□□□□□ -1.29
EWSR1-217ENST00000483415 TRAV22A0A0B4J277 110 aa7.02□□□□□ -1.29
EWSR1-217ENST00000483415 Q6ZRN7 208 aaPredicted RBP7.02□□□□□ -1.29
EWSR1-217ENST00000483415 ZCCHC13Q8WW36 166 aaKnown RBP7.02□□□□□ -1.29
EWSR1-217ENST00000483415 C9orf116Q5BN46 136 aaPredicted RBP7.01□□□□□ -1.29
EWSR1-217ENST00000483415 A8MU10 97 aa7□□□□□ -1.29
EWSR1-217ENST00000483415 PSPHP1O15172 72 aa7□□□□□ -1.29
EWSR1-217ENST00000483415 COX7BP24311 80 aa7□□□□□ -1.29
EWSR1-217ENST00000483415 FBN3Q75N90 2809 aa6.99□□□□□ -1.29
EWSR1-217ENST00000483415 TLX1NBP0CAT3 122 aa6.99□□□□□ -1.29
EWSR1-217ENST00000483415 CNBPP62633 177 aaKnown RBP6.99□□□□□ -1.29
EWSR1-217ENST00000483415 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.99□□□□□ -1.29
EWSR1-217ENST00000483415 C15orf56Q8N910 161 aa6.98□□□□□ -1.29
EWSR1-217ENST00000483415 SYCNQ0VAF6 134 aa6.97□□□□□ -1.29
EWSR1-217ENST00000483415 C10orf25Q5T742 122 aa6.97□□□□□ -1.29
EWSR1-217ENST00000483415 KRTAP1-5Q9BYS1 174 aa6.97□□□□□ -1.29
EWSR1-217ENST00000483415 CYP4F30PQ9H0H9 118 aa6.97□□□□□ -1.29
EWSR1-217ENST00000483415 STARD9Q9P2P6 4700 aa6.97□□□□□ -1.29
EWSR1-217ENST00000483415 PSCAO43653 123 aa6.96□□□□□ -1.29
EWSR1-217ENST00000483415 PLECQ15149 4684 aaKnown RBP6.96□□□□□ -1.29
EWSR1-217ENST00000483415 IGKV2D-24A0A075B6R9 120 aa6.96□□□□□ -1.3
EWSR1-217ENST00000483415 FAM30AQ9NZY2 134 aa6.95□□□□□ -1.3
EWSR1-217ENST00000483415 SPAG11BQ08648 103 aa6.95□□□□□ -1.3
EWSR1-217ENST00000483415 C1orf134Q5TEV5 83 aa6.95□□□□□ -1.3
EWSR1-217ENST00000483415 Q5VV11 94 aa6.95□□□□□ -1.3
EWSR1-217ENST00000483415 SMIM29Q86T20 159 aa6.95□□□□□ -1.3
EWSR1-217ENST00000483415 NBEAL2Q6ZNJ1 2754 aa6.95□□□□□ -1.3
EWSR1-217ENST00000483415 A8MUN3 132 aa6.94□□□□□ -1.3
EWSR1-217ENST00000483415 RBM12B-AS1Q9P1G2 102 aa6.94□□□□□ -1.3
EWSR1-217ENST00000483415 IGLV10-54A0A075B6I4 117 aa6.94□□□□□ -1.3
EWSR1-217ENST00000483415 ELOF1P60002 83 aaKnown RBP6.93□□□□□ -1.3
EWSR1-217ENST00000483415 PLA2G2DQ9UNK4 145 aa6.93□□□□□ -1.3
EWSR1-217ENST00000483415 CLPSL2Q6UWE3 100 aa6.93□□□□□ -1.3
EWSR1-217ENST00000483415 KTN1-AS1Q86SY8 53 aa6.93□□□□□ -1.3
EWSR1-217ENST00000483415 DIRC1Q969H9 104 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms