RNA–Protein interactions for RNA: ENST00000482299.1

NDUFA4-204, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 606 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-204ENST00000482299 ARFGEF2Q9Y6D5 1785 aa0.05□□□□□ -2.4
NDUFA4-204ENST00000482299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.05□□□□□ -2.43e-8■■□□□ 12.9
NDUFA4-204ENST00000482299 TDRG1Q3Y452 100 aa0.05□□□□□ -2.4
NDUFA4-204ENST00000482299 CSPG4Q6UVK1 2322 aa0.05□□□□□ -2.4
NDUFA4-204ENST00000482299 CFAP74Q9C0B2 1584 aa0.05□□□□□ -2.4
NDUFA4-204ENST00000482299 HMCN2Q8NDA2 5059 aa0.05□□□□□ -2.4
NDUFA4-204ENST00000482299 ERVK-7P63135 1459 aa0.04□□□□□ -2.4
NDUFA4-204ENST00000482299 ARHGAP35Q9NRY4 1499 aa0.04□□□□□ -2.4
NDUFA4-204ENST00000482299 SPRR2GQ9BYE4 73 aa0.04□□□□□ -2.4
NDUFA4-204ENST00000482299 EP300Q09472 2414 aaPredicted RBP0.04□□□□□ -2.4
NDUFA4-204ENST00000482299 ADAMTS12P58397 1594 aa0.03□□□□□ -2.4
NDUFA4-204ENST00000482299 CEBPZOSA8MTT3 80 aa0.03□□□□□ -2.4
NDUFA4-204ENST00000482299 LELP1Q5T871 98 aa0.03□□□□□ -2.4
NDUFA4-204ENST00000482299 GAFA1Q96PS6 74 aa0.03□□□□□ -2.4
NDUFA4-204ENST00000482299 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.03□□□□□ -2.41
NDUFA4-204ENST00000482299 NCOA2Q15596 1464 aa0.03□□□□□ -2.41
NDUFA4-204ENST00000482299 PLCH1Q4KWH8 1693 aa0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 LPAP08519 4548 aa0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 MUC2Q02817 5179 aa0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 FAT2Q9NYQ8 4349 aa0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 ACYP1P07311 99 aa0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 RPL38P63173 70 aaKnown RBP0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 TRAV21A0A0B4J279 112 aa0.01□□□□□ -2.41
NDUFA4-204ENST00000482299 HEPN1Q6WQI6 88 aa0.01□□□□□ -2.41
NDUFA4-204ENST00000482299 WFDC9Q8NEX5 89 aa0.01□□□□□ -2.41
NDUFA4-204ENST00000482299 REV3LO60673 3130 aa0.01□□□□□ -2.41
NDUFA4-204ENST00000482299 KANTRA0A1W2PQU2 76 aa0□□□□□ -2.41
NDUFA4-204ENST00000482299 CCDC88BA6NC98 1476 aa0□□□□□ -2.41
NDUFA4-204ENST00000482299 M0R2T5 61 aa0□□□□□ -2.41
NDUFA4-204ENST00000482299 HSPG2P98160 4391 aa-0.01□□□□□ -2.41
NDUFA4-204ENST00000482299 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.01□□□□□ -2.41
NDUFA4-204ENST00000482299 STAB1Q9NY15 2570 aa-0.01□□□□□ -2.41
NDUFA4-204ENST00000482299 ALMS1Q8TCU4 4167 aa-0.01□□□□□ -2.41
NDUFA4-204ENST00000482299 RICTORQ6R327 1708 aa-0.01□□□□□ -2.41
NDUFA4-204ENST00000482299 LRRIQ1Q96JM4 1722 aa-0.01□□□□□ -2.41
NDUFA4-204ENST00000482299 ABCC1P33527 1531 aa-0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 MAP3K1Q13233 1512 aa-0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 PRKDCP78527 4128 aaKnown RBP-0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 NDUFB1O75438 58 aa-0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 ST20Q9HBF5 79 aa-0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 CDKN2A-AS1Q9UH64 79 aa-0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 KMT2CQ8NEZ4 4911 aaKnown RBP-0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 DDX60LQ5H9U9 1706 aaKnown RBP-0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 PTPN23Q9H3S7 1636 aa-0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 ABCA8O94911 1581 aa-0.02□□□□□ -2.41
NDUFA4-204ENST00000482299 SETXQ7Z333 2677 aaKnown RBP-0.03□□□□□ -2.41
NDUFA4-204ENST00000482299 BSNQ9UPA5 3926 aa-0.03□□□□□ -2.41
NDUFA4-204ENST00000482299 PLXNC1O60486 1568 aa-0.03□□□□□ -2.41
NDUFA4-204ENST00000482299 DCHS2Q6V1P9 2916 aa-0.03□□□□□ -2.42
NDUFA4-204ENST00000482299 HECTD4Q9Y4D8 3996 aa-0.04□□□□□ -2.42
NDUFA4-204ENST00000482299 RRBP1Q9P2E9 1410 aaKnown RBP-0.04□□□□□ -2.42
NDUFA4-204ENST00000482299 CICQ96RK0 1608 aaPredicted RBP-0.04□□□□□ -2.42
NDUFA4-204ENST00000482299 SPRR2BP35325 72 aa-0.04□□□□□ -2.42
NDUFA4-204ENST00000482299 ADIRFQ15847 76 aa-0.04□□□□□ -2.42
NDUFA4-204ENST00000482299 ATP5EP2Q5VTU8 51 aa-0.04□□□□□ -2.42
NDUFA4-204ENST00000482299 WFDC13Q8IUB5 93 aa-0.04□□□□□ -2.42
NDUFA4-204ENST00000482299 S100A13Q99584 98 aa-0.04□□□□□ -2.42
NDUFA4-204ENST00000482299 NSD1Q96L73 2696 aaPredicted RBP-0.04□□□□□ -2.42
NDUFA4-204ENST00000482299 COL6A3P12111 3177 aa-0.04□□□□□ -2.42
NDUFA4-204ENST00000482299 CHD8Q9HCK8 2581 aa-0.04□□□□□ -2.42
NDUFA4-204ENST00000482299 RYR3Q15413 4870 aa-0.05□□□□□ -2.42
NDUFA4-204ENST00000482299 DEFB135Q30KP9 77 aa-0.05□□□□□ -2.42
NDUFA4-204ENST00000482299 COX6B2Q6YFQ2 88 aa-0.05□□□□□ -2.42
NDUFA4-204ENST00000482299 PCLOQ9Y6V0 5065 aa-0.05□□□□□ -2.42
NDUFA4-204ENST00000482299 RNF213Q63HN8 5207 aa-0.05□□□□□ -2.42
NDUFA4-204ENST00000482299 MAP1BP46821 2468 aaKnown RBP-0.06□□□□□ -2.42
NDUFA4-204ENST00000482299 CNOT1A5YKK6 2376 aaKnown RBP-0.06□□□□□ -2.42
NDUFA4-204ENST00000482299 PARP4Q9UKK3 1724 aaKnown RBP-0.06□□□□□ -2.42
NDUFA4-204ENST00000482299 FLNAP21333 2647 aaKnown RBP-0.06□□□□□ -2.42
NDUFA4-204ENST00000482299 WNK1Q9H4A3 2382 aa-0.07□□□□□ -2.42
NDUFA4-204ENST00000482299 LRP2P98164 4655 aa-0.07□□□□□ -2.42
NDUFA4-204ENST00000482299 TRANK1O15050 2925 aa-0.07□□□□□ -2.42
NDUFA4-204ENST00000482299 WIZO95785 1651 aa-0.08□□□□□ -2.42
NDUFA4-204ENST00000482299 H3BUT2 72 aa-0.08□□□□□ -2.42
NDUFA4-204ENST00000482299 NDUFA3O95167 84 aa-0.08□□□□□ -2.42
NDUFA4-204ENST00000482299 ITSN1Q15811 1721 aa-0.08□□□□□ -2.42
NDUFA4-204ENST00000482299 UBR4Q5T4S7 5183 aa-0.08□□□□□ -2.42
NDUFA4-204ENST00000482299 APC2O95996 2303 aa-0.08□□□□□ -2.42
NDUFA4-204ENST00000482299 RYR2Q92736 4967 aa-0.08□□□□□ -2.42
NDUFA4-204ENST00000482299 IQGAP3Q86VI3 1631 aa-0.09□□□□□ -2.42
NDUFA4-204ENST00000482299 USH2AO75445 5202 aa-0.09□□□□□ -2.42
NDUFA4-204ENST00000482299 MYO5CQ9NQX4 1742 aa-0.09□□□□□ -2.42
NDUFA4-204ENST00000482299 RYR1P21817 5038 aa-0.09□□□□□ -2.42
NDUFA4-204ENST00000482299 THOC2Q8NI27 1593 aaKnown RBP-0.09□□□□□ -2.42
NDUFA4-204ENST00000482299 BVES-AS1Q5T3Y7 98 aa-0.09□□□□□ -2.42
NDUFA4-204ENST00000482299 TENM2Q9NT68 2774 aa-0.09□□□□□ -2.42
NDUFA4-204ENST00000482299 FLNBO75369 2602 aaKnown RBP-0.09□□□□□ -2.42
NDUFA4-204ENST00000482299 KNL1Q8NG31 2342 aa-0.09□□□□□ -2.42
NDUFA4-204ENST00000482299 DEPDC5O75140 1603 aa-0.09□□□□□ -2.42
NDUFA4-204ENST00000482299 RNF17Q9BXT8 1623 aaKnown RBP-0.09□□□□□ -2.42
NDUFA4-204ENST00000482299 ZANQ9Y493 2812 aa-0.09□□□□□ -2.42
NDUFA4-204ENST00000482299 KIAA1109Q2LD37 5005 aa-0.1□□□□□ -2.42
NDUFA4-204ENST00000482299 ACANP16112 2415 aa-0.1□□□□□ -2.43
NDUFA4-204ENST00000482299 UMAD1C9J7I0 102 aa-0.1□□□□□ -2.43
NDUFA4-204ENST00000482299 IFI6P09912 130 aa-0.1□□□□□ -2.43
NDUFA4-204ENST00000482299 NREPQ16612 68 aa-0.1□□□□□ -2.43
NDUFA4-204ENST00000482299 DEFB121Q5J5C9 76 aa-0.1□□□□□ -2.43
NDUFA4-204ENST00000482299 EPPK1P58107 5090 aaKnown RBP-0.1□□□□□ -2.43
NDUFA4-204ENST00000482299 ABCA13Q86UQ4 5058 aa-0.1□□□□□ -2.43
NDUFA4-204ENST00000482299 CD163L1Q9NR16 1453 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms