RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 CRIP1P50238 77 aa0.64□□□□□ -2.31
NPHP3-207ENST00000476742 LINC00158P58513 81 aa0.64□□□□□ -2.31
NPHP3-207ENST00000476742 CDKN2A-AS1Q9UH64 79 aa0.64□□□□□ -2.31
NPHP3-207ENST00000476742 URB1O60287 2271 aaKnown RBP0.64□□□□□ -2.31
NPHP3-207ENST00000476742 CACNA1CQ13936 2221 aa0.64□□□□□ -2.31
NPHP3-207ENST00000476742 ASCC3Q8N3C0 2202 aaKnown RBP0.64□□□□□ -2.31
NPHP3-207ENST00000476742 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
NPHP3-207ENST00000476742 LY75O60449 1722 aa0.64□□□□□ -2.31
NPHP3-207ENST00000476742 NRAPQ86VF7 1730 aa0.64□□□□□ -2.31
NPHP3-207ENST00000476742 DDX60Q8IY21 1712 aaKnown RBP0.64□□□□□ -2.31
NPHP3-207ENST00000476742 NFAT5O94916 1531 aa0.64□□□□□ -2.31
NPHP3-207ENST00000476742 F5P12259 2224 aa0.63□□□□□ -2.31
NPHP3-207ENST00000476742 GOLGA4Q13439 2230 aaKnown RBP0.63□□□□□ -2.31
NPHP3-207ENST00000476742 RPL37P61927 97 aaKnown RBP0.63□□□□□ -2.31
NPHP3-207ENST00000476742 COX6B2Q6YFQ2 88 aa0.63□□□□□ -2.31
NPHP3-207ENST00000476742 Q8IZM0 81 aa0.63□□□□□ -2.31
NPHP3-207ENST00000476742 SMIM2Q9BVW6 85 aa0.63□□□□□ -2.31
NPHP3-207ENST00000476742 PRO3102Q9H379 93 aa0.63□□□□□ -2.31
NPHP3-207ENST00000476742 TP53AIP1Q9HCN2 124 aa0.63□□□□□ -2.31
NPHP3-207ENST00000476742 PLXNB2O15031 1838 aa0.63□□□□□ -2.31
NPHP3-207ENST00000476742 LRRC37AA6NMS7 1700 aa0.63□□□□□ -2.31
NPHP3-207ENST00000476742 ABCA1O95477 2261 aa0.63□□□□□ -2.31
NPHP3-207ENST00000476742 NRXN3Q9Y4C0 1643 aa0.63□□□□□ -2.31
NPHP3-207ENST00000476742 KNTC1P50748 2209 aa0.62□□□□□ -2.31
NPHP3-207ENST00000476742 SAMD9LQ8IVG5 1584 aa0.62□□□□□ -2.31
NPHP3-207ENST00000476742 AHCTF1Q8WYP5 2266 aa0.62□□□□□ -2.31
NPHP3-207ENST00000476742 DDX60LQ5H9U9 1706 aaKnown RBP0.62□□□□□ -2.31
NPHP3-207ENST00000476742 DOT1LQ8TEK3 1739 aa0.62□□□□□ -2.31
NPHP3-207ENST00000476742 K7EQZ3 153 aa0.62□□□□□ -2.31
NPHP3-207ENST00000476742 MINOS1Q5TGZ0 78 aa0.62□□□□□ -2.31
NPHP3-207ENST00000476742 LINC00308Q8TCZ7 52 aa0.62□□□□□ -2.31
NPHP3-207ENST00000476742 MRPL34Q9BQ48 92 aaKnown RBP0.62□□□□□ -2.31
NPHP3-207ENST00000476742 DEPDC5O75140 1603 aa0.62□□□□□ -2.31
NPHP3-207ENST00000476742 ATP7AQ04656 1500 aa0.62□□□□□ -2.31
NPHP3-207ENST00000476742 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
NPHP3-207ENST00000476742 ZNF831Q5JPB2 1677 aa0.62□□□□□ -2.31
NPHP3-207ENST00000476742 QSER1Q2KHR3 1735 aa0.61□□□□□ -2.31
NPHP3-207ENST00000476742 CADP27708 2225 aa0.61□□□□□ -2.31
NPHP3-207ENST00000476742 SLIT1O75093 1534 aa0.61□□□□□ -2.31
NPHP3-207ENST00000476742 TECTAO75443 2155 aa0.61□□□□□ -2.31
NPHP3-207ENST00000476742 TOGARAM1Q9Y4F4 1720 aa0.61□□□□□ -2.31
NPHP3-207ENST00000476742 LYNX1G3V0Z9 82 aa0.6□□□□□ -2.31
NPHP3-207ENST00000476742 NDUFA1O15239 70 aa0.6□□□□□ -2.31
NPHP3-207ENST00000476742 COX6A2Q02221 97 aa0.6□□□□□ -2.31
NPHP3-207ENST00000476742 TFF3Q07654 80 aa0.6□□□□□ -2.31
NPHP3-207ENST00000476742 SPINK9Q5DT21 86 aa0.6□□□□□ -2.31
NPHP3-207ENST00000476742 CNFNQ9BYD5 112 aa0.6□□□□□ -2.31
NPHP3-207ENST00000476742 C6orf48Q9UBA6 75 aa0.6□□□□□ -2.31
NPHP3-207ENST00000476742 SSC5DA1L4H1 1573 aa0.6□□□□□ -2.31
NPHP3-207ENST00000476742 C4AP0C0L4 1744 aa0.6□□□□□ -2.31
NPHP3-207ENST00000476742 ASXL3Q9C0F0 2248 aa0.6□□□□□ -2.31
NPHP3-207ENST00000476742 E9PCH4 1651 aa0.59□□□□□ -2.31
NPHP3-207ENST00000476742 IAPPP10997 89 aa0.59□□□□□ -2.31
NPHP3-207ENST00000476742 DEFB123Q8N688 67 aa0.59□□□□□ -2.31
NPHP3-207ENST00000476742 PRO0255Q9UI72 69 aa0.59□□□□□ -2.31
NPHP3-207ENST00000476742 KIF21BO75037 1637 aa0.59□□□□□ -2.32
NPHP3-207ENST00000476742 LMO7Q8WWI1 1683 aa0.59□□□□□ -2.32
NPHP3-207ENST00000476742 MROH2BQ7Z745 1585 aa0.58□□□□□ -2.32
NPHP3-207ENST00000476742 DOPEY2Q9Y3R5 2298 aa0.58□□□□□ -2.32
NPHP3-207ENST00000476742 H3BUA1 57 aa0.58□□□□□ -2.32
NPHP3-207ENST00000476742 APLNQ9ULZ1 77 aa0.58□□□□□ -2.32
NPHP3-207ENST00000476742 IQGAP1P46940 1657 aa0.58□□□□□ -2.32
NPHP3-207ENST00000476742 I3L2K1 104 aa0.57□□□□□ -2.32
NPHP3-207ENST00000476742 K7EIL1 84 aa0.57□□□□□ -2.32
NPHP3-207ENST00000476742 DEFB131AP59861 70 aa0.57□□□□□ -2.32
NPHP3-207ENST00000476742 WFDC10BQ8IUB3 73 aa0.57□□□□□ -2.32
NPHP3-207ENST00000476742 WFDC13Q8IUB5 93 aa0.57□□□□□ -2.32
NPHP3-207ENST00000476742 ARHGAP5-AS1Q96IT6 56 aa0.57□□□□□ -2.32
NPHP3-207ENST00000476742 C4BP0C0L5 1744 aa0.57□□□□□ -2.32
NPHP3-207ENST00000476742 CLTCL1P53675 1640 aa0.56□□□□□ -2.32
NPHP3-207ENST00000476742 CACNA1EQ15878 2313 aa0.56□□□□□ -2.32
NPHP3-207ENST00000476742 GCC2Q8IWJ2 1684 aa0.56□□□□□ -2.32
NPHP3-207ENST00000476742 TNRC6CQ9HCJ0 1690 aaKnown RBP0.56□□□□□ -2.32
NPHP3-207ENST00000476742 LOC730098B7Z3J9 87 aa0.56□□□□□ -2.32
NPHP3-207ENST00000476742 H1FX-AS1Q4G0G2 97 aa0.56□□□□□ -2.32
NPHP3-207ENST00000476742 DEFB105AQ8NG35 78 aa0.56□□□□□ -2.32
NPHP3-207ENST00000476742 KAAG1Q9UBP8 84 aa0.56□□□□□ -2.32
NPHP3-207ENST00000476742 NOTCH1P46531 2555 aa0.56□□□□□ -2.32
NPHP3-207ENST00000476742 DUOX1Q9NRD9 1551 aa0.56□□□□□ -2.32
NPHP3-207ENST00000476742 NAV3Q8IVL0 2385 aa0.56□□□□□ -2.32
NPHP3-207ENST00000476742 WNK2Q9Y3S1 2297 aa0.55□□□□□ -2.32
NPHP3-207ENST00000476742 ROS1P08922 2347 aa0.55□□□□□ -2.32
NPHP3-207ENST00000476742 DEFB130BP0DP73 79 aa0.55□□□□□ -2.32
NPHP3-207ENST00000476742 DEFB130AP0DP74 79 aa0.55□□□□□ -2.32
NPHP3-207ENST00000476742 SPRR1AP35321 89 aa0.55□□□□□ -2.32
NPHP3-207ENST00000476742 POLR2KP53803 58 aaKnown RBP0.55□□□□□ -2.32
NPHP3-207ENST00000476742 WT1-ASQ06250 92 aa0.55□□□□□ -2.32
NPHP3-207ENST00000476742 CACNA1BQ00975 2339 aa0.55□□□□□ -2.32
NPHP3-207ENST00000476742 TENM3Q9P273 2699 aa0.55□□□□□ -2.32
NPHP3-207ENST00000476742 BPTFQ12830 3046 aa0.55□□□□□ -2.32
NPHP3-207ENST00000476742 ZFHX3Q15911 3703 aa0.55□□□□□ -2.32
NPHP3-207ENST00000476742 CNOT1A5YKK6 2376 aaKnown RBP0.55□□□□□ -2.32
NPHP3-207ENST00000476742 ZDBF2Q9HCK1 2354 aa0.55□□□□□ -2.32
NPHP3-207ENST00000476742 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
NPHP3-207ENST00000476742 PLCE1Q9P212 2302 aa0.54□□□□□ -2.32
NPHP3-207ENST00000476742 IGLV5-48A0A075B6I7 105 aa0.54□□□□□ -2.32
NPHP3-207ENST00000476742 H0YAA0 97 aa0.54□□□□□ -2.32
NPHP3-207ENST00000476742 SPRR1BP22528 89 aa0.54□□□□□ -2.32
NPHP3-207ENST00000476742 PRLHP81277 87 aa0.54□□□□□ -2.32
NPHP3-207ENST00000476742 DEFB109BQ30KR1 87 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms