RNA–Protein interactions for RNA: ENST00000471946.1

MDM2-216, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 251 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-216ENST00000471946 RGPD8O14715 1765 aaPredicted RBP-1.83□□□□□ -2.7
MDM2-216ENST00000471946 RGPD5Q99666 1765 aa-1.83□□□□□ -2.7
MDM2-216ENST00000471946 SUPT6HQ7KZ85 1726 aaKnown RBP-1.83□□□□□ -2.7
MDM2-216ENST00000471946 MPC2O95563 127 aa-1.84□□□□□ -2.7
MDM2-216ENST00000471946 MT1AP04731 61 aa-1.84□□□□□ -2.7
MDM2-216ENST00000471946 MYO18BQ8IUG5 2567 aa-1.84□□□□□ -2.7
MDM2-216ENST00000471946 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.84□□□□□ -2.7
MDM2-216ENST00000471946 ANKRD11Q6UB99 2663 aaPredicted RBP-1.85□□□□□ -2.71
MDM2-216ENST00000471946 PMCHL2Q9BQD1 86 aa-1.85□□□□□ -2.71
MDM2-216ENST00000471946 AP4S1Q9Y587 144 aa-1.85□□□□□ -2.71
MDM2-216ENST00000471946 KALRNO60229 2985 aa-1.85□□□□□ -2.71
MDM2-216ENST00000471946 PSENENQ9NZ42 101 aa-1.86□□□□□ -2.71
MDM2-216ENST00000471946 RGPD1P0DJD0 1748 aa-1.86□□□□□ -2.71
MDM2-216ENST00000471946 ANKRD36BQ8N2N9 1353 aa-1.86□□□□□ -2.71
MDM2-216ENST00000471946 SCN11AQ9UI33 1791 aa-1.87□□□□□ -2.71
MDM2-216ENST00000471946 KIAA1109Q2LD37 5005 aa-1.87□□□□□ -2.71
MDM2-216ENST00000471946 H3BNG1 76 aa-1.88□□□□□ -2.71
MDM2-216ENST00000471946 MAGI2Q86UL8 1455 aa-1.88□□□□□ -2.71
MDM2-216ENST00000471946 TMEM218A2RU14 115 aa-1.89□□□□□ -2.71
MDM2-216ENST00000471946 IGLC2P0DOY2 106 aa-1.89□□□□□ -2.71
MDM2-216ENST00000471946 IGLC3P0DOY3 106 aa-1.89□□□□□ -2.71
MDM2-216ENST00000471946 C20orf202A1L168 122 aa-1.9□□□□□ -2.71
MDM2-216ENST00000471946 ATOX1O00244 68 aa-1.9□□□□□ -2.71
MDM2-216ENST00000471946 FYCO1Q9BQS8 1478 aa-1.9□□□□□ -2.71
MDM2-216ENST00000471946 ANK3Q12955 4377 aaKnown RBP-1.91□□□□□ -2.71
MDM2-216ENST00000471946 UBR1Q8IWV7 1749 aa-1.91□□□□□ -2.71
MDM2-216ENST00000471946 MT-ATP8P03928 68 aa-1.91□□□□□ -2.72
MDM2-216ENST00000471946 ETDBQ3ZM63 59 aa-1.91□□□□□ -2.72
MDM2-216ENST00000471946 GCN1Q92616 2671 aaKnown RBP-1.91□□□□□ -2.72
MDM2-216ENST00000471946 LAMA2P24043 3122 aaKnown RBP-1.91□□□□□ -2.72
MDM2-216ENST00000471946 SERP2Q8N6R1 65 aa-1.92□□□□□ -2.72
MDM2-216ENST00000471946 LRRC7Q96NW7 1537 aa-1.92□□□□□ -2.72
MDM2-216ENST00000471946 DNAH2Q9P225 4427 aa-1.92□□□□□ -2.72
MDM2-216ENST00000471946 POLR1AO95602 1720 aaPredicted RBP-1.93□□□□□ -2.72
MDM2-216ENST00000471946 D6R8Y8 96 aa-1.93□□□□□ -2.72
MDM2-216ENST00000471946 LEPROTL1O95214 131 aa-1.93□□□□□ -2.72
MDM2-216ENST00000471946 NMSQ5H8A3 153 aa-1.93□□□□□ -2.72
MDM2-216ENST00000471946 MUSTN1Q8IVN3 82 aa-1.93□□□□□ -2.72
MDM2-216ENST00000471946 LRRC9Q6ZRR7 1453 aa-1.94□□□□□ -2.72
MDM2-216ENST00000471946 APOBP04114 4563 aaKnown RBP-1.94□□□□□ -2.72
MDM2-216ENST00000471946 F8WEM9 126 aa-1.94□□□□□ -2.72
MDM2-216ENST00000471946 HMGN3Q15651 99 aa-1.96□□□□□ -2.72
MDM2-216ENST00000471946 ZNF720Q7Z2F6 126 aa-1.96□□□□□ -2.72
MDM2-216ENST00000471946 LTN1O94822 1766 aa-1.96□□□□□ -2.72
MDM2-216ENST00000471946 ACACAQ13085 2346 aa-1.97□□□□□ -2.72
MDM2-216ENST00000471946 NDUFA3O95167 84 aa-1.97□□□□□ -2.72
MDM2-216ENST00000471946 COX7BP24311 80 aa-1.97□□□□□ -2.72
MDM2-216ENST00000471946 ANKRD26Q9UPS8 1709 aa-1.97□□□□□ -2.73
MDM2-216ENST00000471946 NESP48681 1621 aa-1.98□□□□□ -2.73
MDM2-216ENST00000471946 S100A10P60903 97 aa-1.98□□□□□ -2.73
MDM2-216ENST00000471946 UBE2D4Q9Y2X8 147 aa-1.98□□□□□ -2.73
MDM2-216ENST00000471946 DNAH11Q96DT5 4516 aa-1.98□□□□□ -2.73
MDM2-216ENST00000471946 MYO3AQ8NEV4 1616 aa-1.99□□□□□ -2.73
MDM2-216ENST00000471946 ANKRD50Q9ULJ7 1429 aa-1.99□□□□□ -2.73
MDM2-216ENST00000471946 UQCRHLA0A096LP55 91 aa-1.99□□□□□ -2.73
MDM2-216ENST00000471946 ALKAL2Q6UX46 152 aa-1.99□□□□□ -2.73
MDM2-216ENST00000471946 EPRSP07814 1512 aaKnown RBP-2□□□□□ -2.73
MDM2-216ENST00000471946 FANCAO15360 1455 aa-2.01□□□□□ -2.73
MDM2-216ENST00000471946 SARNPP82979 210 aaKnown RBP-2.01□□□□□ -2.73
MDM2-216ENST00000471946 COL5A1-AS1Q5SY13 56 aa-2.01□□□□□ -2.73
MDM2-216ENST00000471946 COX6B2Q6YFQ2 88 aa-2.01□□□□□ -2.73
MDM2-216ENST00000471946 A0A0C4DFX4 3053 aa-2.01□□□□□ -2.73
MDM2-216ENST00000471946 MTORP42345 2549 aa-2.01□□□□□ -2.73
MDM2-216ENST00000471946 USP32Q8NFA0 1604 aa-2.02□□□□□ -2.73
MDM2-216ENST00000471946 AKAP12Q02952 1782 aa-2.02□□□□□ -2.73
MDM2-216ENST00000471946 LRRK2Q5S007 2527 aa-2.02□□□□□ -2.73
MDM2-216ENST00000471946 C9orf92A6NGG3 77 aa-2.02□□□□□ -2.73
MDM2-216ENST00000471946 PLXNC1O60486 1568 aa-2.02□□□□□ -2.73
MDM2-216ENST00000471946 RPL38P63173 70 aaKnown RBP-2.03□□□□□ -2.73
MDM2-216ENST00000471946 TEX14Q8IWB6 1497 aa-2.03□□□□□ -2.73
MDM2-216ENST00000471946 FAUP35544 74 aaKnown RBP-2.04□□□□□ -2.74
MDM2-216ENST00000471946 PLECQ15149 4684 aaKnown RBP-2.04□□□□□ -2.74
MDM2-216ENST00000471946 DSPP15924 2871 aaKnown RBP-2.04□□□□□ -2.74
MDM2-216ENST00000471946 NBEAQ8NFP9 2946 aa-2.05□□□□□ -2.74
MDM2-216ENST00000471946 DOT1LQ8TEK3 1739 aa-2.05□□□□□ -2.74
MDM2-216ENST00000471946 RNF213Q63HN8 5207 aa-2.06□□□□□ -2.74
MDM2-216ENST00000471946 WDR87Q6ZQQ6 2873 aa-2.06□□□□□ -2.74
MDM2-216ENST00000471946 PKD1L2Q7Z442 2459 aa-2.06□□□□□ -2.74
MDM2-216ENST00000471946 MGAM2Q2M2H8 2515 aa-2.07□□□□□ -2.74
MDM2-216ENST00000471946 NWD1Q149M9 1564 aa-2.07□□□□□ -2.74
MDM2-216ENST00000471946 RYR2Q92736 4967 aa-2.07□□□□□ -2.74
MDM2-216ENST00000471946 ATP7BP35670 1465 aa-2.07□□□□□ -2.74
MDM2-216ENST00000471946 CNTLNQ9NXG0 1405 aa-2.08□□□□□ -2.74
MDM2-216ENST00000471946 FAM186AA6NE01 2351 aa-2.08□□□□□ -2.74
MDM2-216ENST00000471946 LAMA3Q16787 3333 aa-2.08□□□□□ -2.74
MDM2-216ENST00000471946 LINC00032P0C843 101 aa-2.09□□□□□ -2.74
MDM2-216ENST00000471946 C14orf144Q96I85 54 aa-2.09□□□□□ -2.74
MDM2-216ENST00000471946 ATP10BO94823 1461 aa-2.09□□□□□ -2.74
MDM2-216ENST00000471946 MAP3K1Q13233 1512 aa-2.1□□□□□ -2.75
MDM2-216ENST00000471946 GAFA1Q96PS6 74 aa-2.1□□□□□ -2.75
MDM2-216ENST00000471946 DNAH1Q9P2D7 4330 aa-2.1□□□□□ -2.75
MDM2-216ENST00000471946 IQCF6A8MYZ5 107 aa-2.11□□□□□ -2.75
MDM2-216ENST00000471946 UTP20O75691 2785 aaKnown RBP-2.11□□□□□ -2.75
MDM2-216ENST00000471946 CCDC168Q8NDH2 2452 aa-2.12□□□□□ -2.75
MDM2-216ENST00000471946 A0A1B0GUT8 65 aa-2.12□□□□□ -2.75
MDM2-216ENST00000471946 DEFA5Q01523 94 aa-2.12□□□□□ -2.75
MDM2-216ENST00000471946 DPY30Q9C005 99 aa-2.12□□□□□ -2.75
MDM2-216ENST00000471946 PEG3Q9GZU2 1588 aa-2.12□□□□□ -2.75
MDM2-216ENST00000471946 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.12□□□□□ -2.75
MDM2-216ENST00000471946 TMEM131LA2VDJ0 1609 aa-2.13□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms