RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 C10orf142B7Z368 130 aa4.63□□□□□ -1.67
BRCA1-210ENST00000471181 FREM1Q5H8C1 2179 aa4.63□□□□□ -1.67
BRCA1-210ENST00000471181 EML5Q05BV3 1969 aa4.62□□□□□ -1.67
BRCA1-210ENST00000471181 IGFL1Q6UW32 110 aa4.62□□□□□ -1.67
BRCA1-210ENST00000471181 PCDH15Q96QU1 1955 aa4.62□□□□□ -1.67
BRCA1-210ENST00000471181 PRR14LQ5THK1 2151 aa4.61□□□□□ -1.67
BRCA1-210ENST00000471181 IGLV1-50A0A075B6I6 118 aa4.61□□□□□ -1.67
BRCA1-210ENST00000471181 A0A0G2JQZ4 141 aa4.61□□□□□ -1.67
BRCA1-210ENST00000471181 A0A1W2PNN7 141 aa4.61□□□□□ -1.67
BRCA1-210ENST00000471181 SHANK1Q9Y566 2161 aa4.61□□□□□ -1.67
BRCA1-210ENST00000471181 GVQW2A0A096LPI5 108 aaPredicted RBP4.61□□□□□ -1.67
BRCA1-210ENST00000471181 WWC2-AS2Q96NR7 200 aa4.61□□□□□ -1.67
BRCA1-210ENST00000471181 PRR15Q8IV56 129 aa4.61□□□□□ -1.67
BRCA1-210ENST00000471181 ANAPC11Q9NYG5 84 aa4.61□□□□□ -1.67
BRCA1-210ENST00000471181 NAV3Q8IVL0 2385 aa4.6□□□□□ -1.67
BRCA1-210ENST00000471181 NAV2Q8IVL1 2488 aa4.6□□□□□ -1.67
BRCA1-210ENST00000471181 DNAH10OSP0CZ25 163 aa4.6□□□□□ -1.67
BRCA1-210ENST00000471181 ADAMTS20P59510 1910 aa4.6□□□□□ -1.67
BRCA1-210ENST00000471181 COX8CQ7Z4L0 72 aa4.6□□□□□ -1.67
BRCA1-210ENST00000471181 WNK1Q9H4A3 2382 aa4.59□□□□□ -1.67
BRCA1-210ENST00000471181 H3BS24 57 aa4.59□□□□□ -1.67
BRCA1-210ENST00000471181 H3BNG1 76 aa4.59□□□□□ -1.67
BRCA1-210ENST00000471181 HIVEP3Q5T1R4 2406 aa4.58□□□□□ -1.68
BRCA1-210ENST00000471181 RAI1Q7Z5J4 1906 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-210ENST00000471181 ANKHD1Q8IWZ3 2542 aaKnown RBP4.58□□□□□ -1.68
BRCA1-210ENST00000471181 Q6ZSA8 131 aa4.57□□□□□ -1.68
BRCA1-210ENST00000471181 PRO0461Q9UI25 63 aa4.57□□□□□ -1.68
BRCA1-210ENST00000471181 ABCA2Q9BZC7 2435 aa4.57□□□□□ -1.68
BRCA1-210ENST00000471181 LINC01546A6NGU7 62 aa4.57□□□□□ -1.68
BRCA1-210ENST00000471181 AGRNO00468 2067 aa4.57□□□□□ -1.68
BRCA1-210ENST00000471181 PLXNB1O43157 2135 aa4.56□□□□□ -1.68
BRCA1-210ENST00000471181 PRR26Q8N8Z3 221 aa4.56□□□□□ -1.68
BRCA1-210ENST00000471181 ZNF861PO60384 105 aa4.56□□□□□ -1.68
BRCA1-210ENST00000471181 C9orf163Q8N9P6 203 aa4.54□□□□□ -1.68
BRCA1-210ENST00000471181 C15orf56Q8N910 161 aa4.54□□□□□ -1.68
BRCA1-210ENST00000471181 ZNF462Q96JM2 2506 aa4.54□□□□□ -1.68
BRCA1-210ENST00000471181 KRTAP24-1Q3LI83 254 aa4.54□□□□□ -1.68
BRCA1-210ENST00000471181 PCNX3Q9H6A9 2034 aa4.54□□□□□ -1.68
BRCA1-210ENST00000471181 CEP192Q8TEP8 1941 aa4.54□□□□□ -1.68
BRCA1-210ENST00000471181 A0A1W2PPR1 153 aa4.53□□□□□ -1.68
BRCA1-210ENST00000471181 SPINK7P58062 85 aa4.53□□□□□ -1.68
BRCA1-210ENST00000471181 A0A1B0GU33 70 aa4.53□□□□□ -1.68
BRCA1-210ENST00000471181 Q8NAQ8 132 aa4.53□□□□□ -1.68
BRCA1-210ENST00000471181 KCNQ1DNQ9H478 68 aa4.53□□□□□ -1.68
BRCA1-210ENST00000471181 TRIOO75962 3097 aa4.53□□□□□ -1.68
BRCA1-210ENST00000471181 IGF2RP11717 2491 aa4.52□□□□□ -1.69
BRCA1-210ENST00000471181 JMJD1CQ15652 2540 aa4.52□□□□□ -1.69
BRCA1-210ENST00000471181 ASPMQ8IZT6 3477 aa4.51□□□□□ -1.69
BRCA1-210ENST00000471181 IGLV7-43P04211 117 aa4.51□□□□□ -1.69
BRCA1-210ENST00000471181 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
BRCA1-210ENST00000471181 HRES1P13985 223 aa4.51□□□□□ -1.69
BRCA1-210ENST00000471181 KLKP1Q107X0 134 aa4.5□□□□□ -1.69
BRCA1-210ENST00000471181 LINC00528Q8N1L1 170 aa4.5□□□□□ -1.69
BRCA1-210ENST00000471181 LAMA1P25391 3075 aa4.5□□□□□ -1.69
BRCA1-210ENST00000471181 Q8N377 158 aa4.5□□□□□ -1.69
BRCA1-210ENST00000471181 PLAC4Q8WY50 150 aa4.5□□□□□ -1.69
BRCA1-210ENST00000471181 LRRK2Q5S007 2527 aa4.5□□□□□ -1.69
BRCA1-210ENST00000471181 VPS13AQ96RL7 3174 aa4.5□□□□□ -1.69
BRCA1-210ENST00000471181 H7BZZ5 65 aa4.5□□□□□ -1.69
BRCA1-210ENST00000471181 PRAC1Q96KF2 57 aa4.5□□□□□ -1.69
BRCA1-210ENST00000471181 ZFYVE26Q68DK2 2539 aa4.49□□□□□ -1.69
BRCA1-210ENST00000471181 A0A087WTM6 91 aa4.48□□□□□ -1.69
BRCA1-210ENST00000471181 S4R3F8 94 aa4.48□□□□□ -1.69
BRCA1-210ENST00000471181 WDFY4Q6ZS81 3184 aa4.48□□□□□ -1.69
BRCA1-210ENST00000471181 LITAFQ99732 161 aa4.48□□□□□ -1.69
BRCA1-210ENST00000471181 SPEGQ15772 3267 aa4.48□□□□□ -1.69
BRCA1-210ENST00000471181 H1FX-AS1Q4G0G2 97 aa4.48□□□□□ -1.69
BRCA1-210ENST00000471181 COL5A1P20908 1838 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-210ENST00000471181 TET2Q6N021 2002 aaPredicted RBP4.48□□□□□ -1.69
BRCA1-210ENST00000471181 SPANXA2-OT1Q8N9U9 137 aa4.47□□□□□ -1.69
BRCA1-210ENST00000471181 IGLV7-46A0A075B6I9 117 aa4.47□□□□□ -1.69
BRCA1-210ENST00000471181 FRYLO94915 3013 aa4.47□□□□□ -1.69
BRCA1-210ENST00000471181 FASNP49327 2511 aaKnown RBP4.47□□□□□ -1.69
BRCA1-210ENST00000471181 SPRR4Q96PI1 79 aa4.46□□□□□ -1.7
BRCA1-210ENST00000471181 CSAG1Q6PB30 78 aa4.45□□□□□ -1.7
BRCA1-210ENST00000471181 DMAC1Q96GE9 116 aa4.45□□□□□ -1.7
BRCA1-210ENST00000471181 CFAP54Q96N23 3096 aa4.44□□□□□ -1.7
BRCA1-210ENST00000471181 MYO9AB2RTY4 2548 aa4.43□□□□□ -1.7
BRCA1-210ENST00000471181 KRTAP10-11P60412 298 aa4.43□□□□□ -1.7
BRCA1-210ENST00000471181 DCHS1Q96JQ0 3298 aa4.42□□□□□ -1.7
BRCA1-210ENST00000471181 R4GN34 69 aa4.42□□□□□ -1.7
BRCA1-210ENST00000471181 LINC00612Q8N6U2 182 aa4.42□□□□□ -1.7
BRCA1-210ENST00000471181 K7EIL1 84 aa4.41□□□□□ -1.7
BRCA1-210ENST00000471181 A0A1W2PNM2 257 aa4.4□□□□□ -1.7
BRCA1-210ENST00000471181 Q75L30 129 aa4.4□□□□□ -1.7
BRCA1-210ENST00000471181 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.4□□□□□ -1.7
BRCA1-210ENST00000471181 PIEZO2Q9H5I5 2752 aa4.4□□□□□ -1.71
BRCA1-210ENST00000471181 EIF4EBP3O60516 100 aaPredicted RBP4.39□□□□□ -1.71
BRCA1-210ENST00000471181 CASC10Q5T4H9 136 aa4.39□□□□□ -1.71
BRCA1-210ENST00000471181 FREM2Q5SZK8 3169 aa4.39□□□□□ -1.71
BRCA1-210ENST00000471181 TLN1Q9Y490 2541 aaKnown RBP4.39□□□□□ -1.71
BRCA1-210ENST00000471181 FRYQ5TBA9 3013 aa4.38□□□□□ -1.71
BRCA1-210ENST00000471181 ABCA12Q86UK0 2595 aa4.38□□□□□ -1.71
BRCA1-210ENST00000471181 PCSK5Q92824 1860 aa4.37□□□□□ -1.71
BRCA1-210ENST00000471181 Q8N9P0 234 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-210ENST00000471181 ROMO1P60602 79 aa4.36□□□□□ -1.71
BRCA1-210ENST00000471181 LAMA5O15230 3695 aa4.36□□□□□ -1.71
BRCA1-210ENST00000471181 CPAMD8Q8IZJ3 1885 aa4.36□□□□□ -1.71
BRCA1-210ENST00000471181 ZCCHC13Q8WW36 166 aaKnown RBP4.36□□□□□ -1.71
BRCA1-210ENST00000471181 DMXL1Q9Y485 3027 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms