RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 G3V318 75 aa2.34□□□□□ -2.03
SORT1-202ENST00000466471 H7BZZ5 65 aa2.34□□□□□ -2.03
SORT1-202ENST00000466471 H7C2G1 150 aa2.34□□□□□ -2.03
SORT1-202ENST00000466471 IGKV2D-28P01615 120 aa2.34□□□□□ -2.03
SORT1-202ENST00000466471 PRB4P10163 310 aaPredicted RBP2.34□□□□□ -2.03
SORT1-202ENST00000466471 SS18Q15532 418 aa2.34□□□□□ -2.03
SORT1-202ENST00000466471 TMEM86BQ8N661 226 aa2.34□□□□□ -2.03
SORT1-202ENST00000466471 C16orf95Q9H693 158 aa2.34□□□□□ -2.03
SORT1-202ENST00000466471 ZNF702PQ9H963 129 aa2.34□□□□□ -2.03
SORT1-202ENST00000466471 CDKN2A-AS1Q9UH64 79 aa2.34□□□□□ -2.03
SORT1-202ENST00000466471 VPS13BQ7Z7G8 4022 aa2.34□□□□□ -2.04
SORT1-202ENST00000466471 TRAV7A0A075B6U4 112 aa2.33□□□□□ -2.04
SORT1-202ENST00000466471 LOC110117498A0A087WWA1 95 aa2.33□□□□□ -2.04
SORT1-202ENST00000466471 IGHV3-66A0A0C4DH42 116 aa2.33□□□□□ -2.04
SORT1-202ENST00000466471 NDUFAF8A1L188 74 aa2.33□□□□□ -2.04
SORT1-202ENST00000466471 A6NDX4 124 aa2.33□□□□□ -2.04
SORT1-202ENST00000466471 TMEM256-PLSCR3K7ERE1 68 aa2.33□□□□□ -2.04
SORT1-202ENST00000466471 PDE6GP18545 87 aa2.33□□□□□ -2.04
SORT1-202ENST00000466471 C11orf72Q8NBR9 251 aa2.33□□□□□ -2.04
SORT1-202ENST00000466471 CDC42SE2Q9NRR3 84 aa2.33□□□□□ -2.04
SORT1-202ENST00000466471 DHRS4-AS1Q9P1J3 65 aa2.33□□□□□ -2.04
SORT1-202ENST00000466471 IGHV3OR16-8A0A075B7F1 116 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 TRAV12-3A0A0B4J271 114 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 IGHV3OR16-9A0A0B4J2B5 98 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 F6UB75 175 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 LYNX1G3V0Z9 82 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 DNAL4O96015 105 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 TRBV12-3P01733 135 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 LYNX1P0DP58 116 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 PFN2P35080 140 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 XCL1P47992 114 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 SYNJ2BPP57105 145 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 NPC2P61916 151 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 SNRPD3P62318 126 aaKnown RBP2.32□□□□□ -2.04
SORT1-202ENST00000466471 CXCL6P80162 114 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 COX6A2Q02221 97 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 PRB3Q04118 309 aaPredicted RBP2.32□□□□□ -2.04
SORT1-202ENST00000466471 C4orf26Q17RF5 130 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 REG3GQ6UW15 175 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 LINC00337Q8N6G1 96 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 SMIM11BQ8TCY0 68 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 Q9UF83 564 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 SORL1Q92673 2214 aa2.32□□□□□ -2.04
SORT1-202ENST00000466471 IGHV3-64A0A075B6Q5 118 aa2.31□□□□□ -2.04
SORT1-202ENST00000466471 IGHV3-74A0A0B4J1X5 117 aa2.31□□□□□ -2.04
SORT1-202ENST00000466471 FAM236DA0A1B0GTK5 79 aa2.31□□□□□ -2.04
SORT1-202ENST00000466471 TRBV6-4A0A1B0GX49 114 aa2.31□□□□□ -2.04
SORT1-202ENST00000466471 IGKV2-29A2NJV5 120 aaPredicted RBP2.31□□□□□ -2.04
SORT1-202ENST00000466471 LY6G6CO95867 125 aa2.31□□□□□ -2.04
SORT1-202ENST00000466471 FAM236CP0DP71 79 aa2.31□□□□□ -2.04
SORT1-202ENST00000466471 PRR3P79522 188 aaKnown RBP2.31□□□□□ -2.04
SORT1-202ENST00000466471 C9orf129Q5T035 196 aaKnown RBP2.31□□□□□ -2.04
SORT1-202ENST00000466471 C1orf158Q8N1D5 194 aa2.31□□□□□ -2.04
SORT1-202ENST00000466471 ORMDL1Q9P0S3 153 aa2.31□□□□□ -2.04
SORT1-202ENST00000466471 LAMTOR3Q9UHA4 124 aa2.31□□□□□ -2.04
SORT1-202ENST00000466471 A0A087WYN8 130 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 IGHV3-49A0A0A0MS15 119 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 A0A1B0GW54 56 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 CRPP02741 224 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 CCL18P55774 89 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 DEFB1P60022 68 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 COX17Q14061 63 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 KIAA0087Q14695 138 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 DEFB114Q30KQ6 69 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 FAM74A4Q5TZK3 123 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 HRCT1Q6UXD1 115 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 NTM-AS1Q6ZSK4 140 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 FP248Q71RG6 208 aaPredicted RBP2.3□□□□□ -2.04
SORT1-202ENST00000466471 MIR7-3HGQ8N6C7 128 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 Q8N814 137 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 DSCR8Q96T75 97 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 SND1-IT1Q9HBX3 110 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 CELA1Q9UNI1 258 aa2.3□□□□□ -2.04
SORT1-202ENST00000466471 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.29□□□□□ -2.04
SORT1-202ENST00000466471 IGKV3D-7A0A0C4DH55 119 aa2.29□□□□□ -2.04
SORT1-202ENST00000466471 TRBV7-4A0A0J9YYF1 115 aa2.29□□□□□ -2.04
SORT1-202ENST00000466471 KRTAP4-16G5E9R7 235 aaPredicted RBP2.29□□□□□ -2.04
SORT1-202ENST00000466471 DEFB112Q30KQ8 113 aa2.29□□□□□ -2.04
SORT1-202ENST00000466471 HIGD2BQ4VC39 106 aa2.29□□□□□ -2.04
SORT1-202ENST00000466471 Q6ZQT0 140 aa2.29□□□□□ -2.04
SORT1-202ENST00000466471 COX7B2Q8TF08 81 aa2.29□□□□□ -2.04
SORT1-202ENST00000466471 C7orf33Q8WU49 177 aa2.29□□□□□ -2.04
SORT1-202ENST00000466471 UBE2E2Q96LR5 201 aa2.29□□□□□ -2.04
SORT1-202ENST00000466471 UBL5Q9BZL1 73 aa2.29□□□□□ -2.04
SORT1-202ENST00000466471 C14orf132Q9NPU4 83 aa2.29□□□□□ -2.04
SORT1-202ENST00000466471 CRCT1Q9UGL9 99 aa2.29□□□□□ -2.04
SORT1-202ENST00000466471 PKHD1L1Q86WI1 4243 aa2.29□□□□□ -2.04
SORT1-202ENST00000466471 A0A087WVE0 104 aa2.28□□□□□ -2.04
SORT1-202ENST00000466471 A0A0J9YWU9 116 aa2.28□□□□□ -2.04
SORT1-202ENST00000466471 TRBV7-6A0A0J9YX20 115 aa2.28□□□□□ -2.04
SORT1-202ENST00000466471 KNCNA6PVL3 124 aa2.28□□□□□ -2.04
SORT1-202ENST00000466471 BLCAPP62952 87 aa2.28□□□□□ -2.04
SORT1-202ENST00000466471 SPINK13Q1W4C9 94 aa2.28□□□□□ -2.04
SORT1-202ENST00000466471 LCE1EQ5T753 118 aa2.28□□□□□ -2.04
SORT1-202ENST00000466471 LINC00575Q6W349 94 aa2.28□□□□□ -2.04
SORT1-202ENST00000466471 Q6ZRU5 148 aa2.28□□□□□ -2.04
SORT1-202ENST00000466471 Q8IZM0 81 aa2.28□□□□□ -2.04
SORT1-202ENST00000466471 TM2D3Q9BRN9 247 aa2.28□□□□□ -2.04
SORT1-202ENST00000466471 TMEM243Q9BU79 118 aa2.28□□□□□ -2.04
SORT1-202ENST00000466471 FSIP2Q5CZC0 6907 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms