RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 FAM19A1Q7Z5A9 133 aa13.12□□□□□ -0.31
CSPG5-203ENST00000456150 UPK3BQ9BT76 320 aa13.12□□□□□ -0.31
CSPG5-203ENST00000456150 KCNQ1DNQ9H478 68 aa13.12□□□□□ -0.31
CSPG5-203ENST00000456150 DNHD1Q96M86 4753 aa13.12□□□□□ -0.31
CSPG5-203ENST00000456150 TM2D3Q9BRN9 247 aa13.11□□□□□ -0.31
CSPG5-203ENST00000456150 RMI2Q96E14 147 aa13.11□□□□□ -0.31
CSPG5-203ENST00000456150 PLA2G2DQ9UNK4 145 aa13.11□□□□□ -0.31
CSPG5-203ENST00000456150 LINC01547P58512 204 aaPredicted RBP13.09□□□□□ -0.31
CSPG5-203ENST00000456150 SERTAD4-AS1Q5TG53 156 aa13.09□□□□□ -0.31
CSPG5-203ENST00000456150 C7orf33Q8WU49 177 aa13.08□□□□□ -0.32
CSPG5-203ENST00000456150 HAMPP81172 84 aa13.07□□□□□ -0.32
CSPG5-203ENST00000456150 CXCL6P80162 114 aa13.06□□□□□ -0.32
CSPG5-203ENST00000456150 HUWE1Q7Z6Z7 4374 aaKnown RBP13.06□□□□□ -0.32
CSPG5-203ENST00000456150 IGLV5-37A0A075B6J1 123 aa13.04□□□□□ -0.32
CSPG5-203ENST00000456150 SMIM20Q8N5G0 67 aa13.03□□□□□ -0.32
CSPG5-203ENST00000456150 CASC10Q5T4H9 136 aa13.02□□□□□ -0.33
CSPG5-203ENST00000456150 PRYO14603 147 aa13.01□□□□□ -0.33
CSPG5-203ENST00000456150 BCE1O60756 84 aa13.01□□□□□ -0.33
CSPG5-203ENST00000456150 DHRS4-AS1Q9P1J3 65 aa13.01□□□□□ -0.33
CSPG5-203ENST00000456150 IGLV1-50A0A075B6I6 118 aa12.98□□□□□ -0.33
CSPG5-203ENST00000456150 Q6ZRX8 168 aa12.98□□□□□ -0.33
CSPG5-203ENST00000456150 DNAH9Q9NYC9 4486 aa12.96□□□□□ -0.33
CSPG5-203ENST00000456150 LOC107984640A0A0U1RRK4 108 aa12.96□□□□□ -0.33
CSPG5-203ENST00000456150 ETDCA0A1B0GVM5 59 aa12.96□□□□□ -0.33
CSPG5-203ENST00000456150 FAM168BA1KXE4 195 aa12.96□□□□□ -0.33
CSPG5-203ENST00000456150 RPL37AP8A6NKH3 93 aa12.96□□□□□ -0.33
CSPG5-203ENST00000456150 SPRR1AP35321 89 aa12.96□□□□□ -0.33
CSPG5-203ENST00000456150 KRTAP21-3Q3LHN1 58 aa12.96□□□□□ -0.33
CSPG5-203ENST00000456150 KRTAP4-16G5E9R7 235 aaPredicted RBP12.95□□□□□ -0.34
CSPG5-203ENST00000456150 Q8N377 158 aa12.95□□□□□ -0.34
CSPG5-203ENST00000456150 DEFB105AQ8NG35 78 aa12.95□□□□□ -0.34
CSPG5-203ENST00000456150 TMEM258P61165 79 aa12.94□□□□□ -0.34
CSPG5-203ENST00000456150 CYSTM1Q9H1C7 97 aa12.94□□□□□ -0.34
CSPG5-203ENST00000456150 COL7A1Q02388 2944 aa12.94□□□□□ -0.34
CSPG5-203ENST00000456150 B9D2Q9BPU9 175 aa12.93□□□□□ -0.34
CSPG5-203ENST00000456150 MRPL55Q7Z7F7 128 aaKnown RBP12.92□□□□□ -0.34
CSPG5-203ENST00000456150 IGLV5-48A0A075B6I7 105 aa12.92□□□□□ -0.34
CSPG5-203ENST00000456150 TRAV7A0A075B6U4 112 aa12.92□□□□□ -0.34
CSPG5-203ENST00000456150 DNAH1Q9P2D7 4330 aa12.91□□□□□ -0.34
CSPG5-203ENST00000456150 KRTAP7-1Q8IUC3 87 aa12.91□□□□□ -0.34
CSPG5-203ENST00000456150 Q9BRP9 147 aa12.91□□□□□ -0.34
CSPG5-203ENST00000456150 SCXQ7RTU7 201 aa12.9□□□□□ -0.34
CSPG5-203ENST00000456150 FAM19A5Q7Z5A7 132 aaPredicted RBP12.9□□□□□ -0.34
CSPG5-203ENST00000456150 NREPQ16612 68 aa12.88□□□□□ -0.35
CSPG5-203ENST00000456150 A0A1B0GW54 56 aa12.87□□□□□ -0.35
CSPG5-203ENST00000456150 J3KT08 172 aa12.85□□□□□ -0.35
CSPG5-203ENST00000456150 MEGF8Q7Z7M0 2845 aa12.85□□□□□ -0.35
CSPG5-203ENST00000456150 FUSP35637 526 aaKnown RBP eCLIP12.84□□□□□ -0.35
CSPG5-203ENST00000456150 C20orf197Q8N268 126 aa12.84□□□□□ -0.35
CSPG5-203ENST00000456150 REG3GQ6UW15 175 aa12.83□□□□□ -0.36
CSPG5-203ENST00000456150 C3orf84H3BNL1 204 aa12.82□□□□□ -0.36
CSPG5-203ENST00000456150 RPS28P62857 69 aaKnown RBP12.82□□□□□ -0.36
CSPG5-203ENST00000456150 TNP2Q05952 138 aa12.82□□□□□ -0.36
CSPG5-203ENST00000456150 PRKDCP78527 4128 aaKnown RBP12.82□□□□□ -0.36
CSPG5-203ENST00000456150 UBE2BP63146 152 aa12.82□□□□□ -0.36
CSPG5-203ENST00000456150 ST20-AS1Q8NBB2 130 aa12.81□□□□□ -0.36
CSPG5-203ENST00000456150 CNBPP62633 177 aaKnown RBP12.81□□□□□ -0.36
CSPG5-203ENST00000456150 BPY2O14599 106 aa12.8□□□□□ -0.36
CSPG5-203ENST00000456150 C1orf137Q5JT78 98 aa12.8□□□□□ -0.36
CSPG5-203ENST00000456150 C16orf90A8MZG2 172 aa12.79□□□□□ -0.36
CSPG5-203ENST00000456150 PSCAO43653 123 aa12.79□□□□□ -0.36
CSPG5-203ENST00000456150 KRTAP1-5Q9BYS1 174 aa12.79□□□□□ -0.36
CSPG5-203ENST00000456150 UBE2DNLQ8IWF7 75 aa12.79□□□□□ -0.36
CSPG5-203ENST00000456150 IGKV4-1P06312 121 aa12.78□□□□□ -0.36
CSPG5-203ENST00000456150 ERC2-IT1O76042 136 aa12.77□□□□□ -0.36
CSPG5-203ENST00000456150 STAB2Q8WWQ8 2551 aa12.77□□□□□ -0.36
CSPG5-203ENST00000456150 A0A1W2PNM2 257 aa12.77□□□□□ -0.37
CSPG5-203ENST00000456150 DPH3Q96FX2 82 aa12.77□□□□□ -0.37
CSPG5-203ENST00000456150 A0A096LNI7 61 aa12.76□□□□□ -0.37
CSPG5-203ENST00000456150 Q8NBF4 154 aa12.76□□□□□ -0.37
CSPG5-203ENST00000456150 KLKP1Q107X0 134 aa12.75□□□□□ -0.37
CSPG5-203ENST00000456150 C14orf177Q52M58 125 aa12.75□□□□□ -0.37
CSPG5-203ENST00000456150 APLNQ9ULZ1 77 aa12.74□□□□□ -0.37
CSPG5-203ENST00000456150 Q8N9L7 120 aa12.74□□□□□ -0.37
CSPG5-203ENST00000456150 IGKV2-24A0A0C4DH68 120 aa12.73□□□□□ -0.37
CSPG5-203ENST00000456150 SPRR4Q96PI1 79 aa12.73□□□□□ -0.37
CSPG5-203ENST00000456150 F8WEM9 126 aa12.7□□□□□ -0.38
CSPG5-203ENST00000456150 A0A1W2PNN7 141 aa12.69□□□□□ -0.38
CSPG5-203ENST00000456150 H7BZZ5 65 aa12.69□□□□□ -0.38
CSPG5-203ENST00000456150 SMIM29Q86T20 159 aa12.68□□□□□ -0.38
CSPG5-203ENST00000456150 FAM236DA0A1B0GTK5 79 aa12.67□□□□□ -0.38
CSPG5-203ENST00000456150 FAM236CP0DP71 79 aa12.67□□□□□ -0.38
CSPG5-203ENST00000456150 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.66□□□□□ -0.38
CSPG5-203ENST00000456150 SNURFQ9Y675 71 aa12.66□□□□□ -0.38
CSPG5-203ENST00000456150 CSMD3Q7Z407 3707 aa12.65□□□□□ -0.38
CSPG5-203ENST00000456150 LINC00476Q8WZB0 136 aa12.65□□□□□ -0.38
CSPG5-203ENST00000456150 NDUFC1O43677 76 aa12.65□□□□□ -0.39
CSPG5-203ENST00000456150 PRLHP81277 87 aa12.65□□□□□ -0.39
CSPG5-203ENST00000456150 PKIGQ9Y2B9 76 aa12.65□□□□□ -0.39
CSPG5-203ENST00000456150 OCR1Q9BZK8 76 aa12.62□□□□□ -0.39
CSPG5-203ENST00000456150 LYSTQ99698 3801 aa12.61□□□□□ -0.39
CSPG5-203ENST00000456150 HIGD2AQ9BW72 106 aa12.61□□□□□ -0.39
CSPG5-203ENST00000456150 FBN3Q75N90 2809 aa12.6□□□□□ -0.39
CSPG5-203ENST00000456150 DYNC2H1Q8NCM8 4307 aaKnown RBP12.6□□□□□ -0.39
CSPG5-203ENST00000456150 TMEM254Q8TBM7 123 aa12.6□□□□□ -0.39
CSPG5-203ENST00000456150 IGLV8-61A0A075B6I0 122 aa12.6□□□□□ -0.39
CSPG5-203ENST00000456150 IGFL1Q6UW32 110 aa12.59□□□□□ -0.39
CSPG5-203ENST00000456150 DNAH10Q8IVF4 4471 aa12.59□□□□□ -0.39
CSPG5-203ENST00000456150 C9orf163Q8N9P6 203 aa12.58□□□□□ -0.39
CSPG5-203ENST00000456150 NUPR2A6NF83 97 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms