RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 LOC107984640A0A0U1RRK4 108 aa7.59□□□□□ -1.19
VTA1-203ENST00000452973 KRTAP7-1Q8IUC3 87 aa7.59□□□□□ -1.2
VTA1-203ENST00000452973 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.58□□□□□ -1.2
VTA1-203ENST00000452973 DSCR8Q96T75 97 aa7.58□□□□□ -1.2
VTA1-203ENST00000452973 KCNQ1DNQ9H478 68 aa7.58□□□□□ -1.2
VTA1-203ENST00000452973 Q6Q795 121 aa7.57□□□□□ -1.2
VTA1-203ENST00000452973 TRBV7-6A0A0J9YX20 115 aa7.57□□□□□ -1.2
VTA1-203ENST00000452973 DNAH1Q9P2D7 4330 aa7.57□□□□□ -1.2
VTA1-203ENST00000452973 A0A096LNI7 61 aa7.57□□□□□ -1.2
VTA1-203ENST00000452973 TRBV7-7A0A0K0K1E9 115 aa7.57□□□□□ -1.2
VTA1-203ENST00000452973 FAM236AA0A1B0GUQ0 79 aa7.57□□□□□ -1.2
VTA1-203ENST00000452973 FAM236BA0A1B0GV22 79 aa7.57□□□□□ -1.2
VTA1-203ENST00000452973 NUPR2A6NF83 97 aa7.57□□□□□ -1.2
VTA1-203ENST00000452973 MRPL55Q7Z7F7 128 aaKnown RBP7.57□□□□□ -1.2
VTA1-203ENST00000452973 NHLRC4P0CG21 123 aaPredicted RBP7.56□□□□□ -1.2
VTA1-203ENST00000452973 PRKDCP78527 4128 aaKnown RBP7.56□□□□□ -1.2
VTA1-203ENST00000452973 IGLV1-50A0A075B6I6 118 aa7.55□□□□□ -1.2
VTA1-203ENST00000452973 ETDCA0A1B0GVM5 59 aa7.55□□□□□ -1.2
VTA1-203ENST00000452973 Q6ZQT0 140 aa7.55□□□□□ -1.2
VTA1-203ENST00000452973 NBDYA0A0U1RRE5 68 aa7.54□□□□□ -1.2
VTA1-203ENST00000452973 CHTF8P0CG12 524 aa7.54□□□□□ -1.2
VTA1-203ENST00000452973 PLA2G2DQ9UNK4 145 aa7.54□□□□□ -1.2
VTA1-203ENST00000452973 C5orf47Q569G3 176 aa7.53□□□□□ -1.2
VTA1-203ENST00000452973 C3orf22Q8N5N4 141 aa7.53□□□□□ -1.2
VTA1-203ENST00000452973 A0A087WVE0 104 aa7.53□□□□□ -1.2
VTA1-203ENST00000452973 HIST1H4AP62805 103 aaKnown RBP7.53□□□□□ -1.2
VTA1-203ENST00000452973 A0A1W2PNN7 141 aa7.52□□□□□ -1.21
VTA1-203ENST00000452973 UBE2BP63146 152 aa7.52□□□□□ -1.21
VTA1-203ENST00000452973 GHRHP01286 108 aa7.52□□□□□ -1.21
VTA1-203ENST00000452973 Q6ZRX8 168 aa7.52□□□□□ -1.21
VTA1-203ENST00000452973 Q9BRP9 147 aa7.52□□□□□ -1.21
VTA1-203ENST00000452973 ST20-AS1Q8NBB2 130 aa7.51□□□□□ -1.21
VTA1-203ENST00000452973 UBL5Q9BZL1 73 aa7.51□□□□□ -1.21
VTA1-203ENST00000452973 IMUPQ9GZP8 106 aa7.51□□□□□ -1.21
VTA1-203ENST00000452973 DNHD1Q96M86 4753 aa7.51□□□□□ -1.21
VTA1-203ENST00000452973 PLECQ15149 4684 aaKnown RBP7.51□□□□□ -1.21
VTA1-203ENST00000452973 TGP01266 2768 aa7.51□□□□□ -1.21
VTA1-203ENST00000452973 FUSP35637 526 aaKnown RBP eCLIP7.51□□□□□ -1.21
VTA1-203ENST00000452973 IGLV5-37A0A075B6J1 123 aa7.51□□□□□ -1.21
VTA1-203ENST00000452973 C16orf90A8MZG2 172 aa7.51□□□□□ -1.21
VTA1-203ENST00000452973 PRYO14603 147 aa7.51□□□□□ -1.21
VTA1-203ENST00000452973 DPH3Q96FX2 82 aa7.51□□□□□ -1.21
VTA1-203ENST00000452973 LOC110117498A0A087WWA1 95 aa7.5□□□□□ -1.21
VTA1-203ENST00000452973 H3BQ85 93 aa7.5□□□□□ -1.21
VTA1-203ENST00000452973 CNBPP62633 177 aaKnown RBP7.5□□□□□ -1.21
VTA1-203ENST00000452973 Q6JHZ5 121 aa7.5□□□□□ -1.21
VTA1-203ENST00000452973 HAMPP81172 84 aa7.49□□□□□ -1.21
VTA1-203ENST00000452973 KRTAP4-16G5E9R7 235 aaPredicted RBP7.49□□□□□ -1.21
VTA1-203ENST00000452973 ERC2-IT1O76042 136 aa7.49□□□□□ -1.21
VTA1-203ENST00000452973 C14orf177Q52M58 125 aa7.49□□□□□ -1.21
VTA1-203ENST00000452973 REG3GQ6UW15 175 aa7.49□□□□□ -1.21
VTA1-203ENST00000452973 Q8N377 158 aa7.49□□□□□ -1.21
VTA1-203ENST00000452973 DHRS4-AS1Q9P1J3 65 aa7.49□□□□□ -1.21
VTA1-203ENST00000452973 PRLHP81277 87 aa7.48□□□□□ -1.21
VTA1-203ENST00000452973 TRBV7-4A0A0J9YYF1 115 aa7.47□□□□□ -1.21
VTA1-203ENST00000452973 LRCOL1A6NCL2 159 aa7.47□□□□□ -1.21
VTA1-203ENST00000452973 STARD9Q9P2P6 4700 aa7.47□□□□□ -1.21
VTA1-203ENST00000452973 SPRR1AP35321 89 aa7.47□□□□□ -1.21
VTA1-203ENST00000452973 PHF5AQ7RTV0 110 aaKnown RBP7.47□□□□□ -1.21
VTA1-203ENST00000452973 FAM19A1Q7Z5A9 133 aa7.47□□□□□ -1.21
VTA1-203ENST00000452973 SRRM2Q9UQ35 2752 aaKnown RBP7.47□□□□□ -1.21
VTA1-203ENST00000452973 PDE6GP18545 87 aa7.46□□□□□ -1.22
VTA1-203ENST00000452973 Q6ZVQ6 151 aa7.45□□□□□ -1.22
VTA1-203ENST00000452973 SCXQ7RTU7 201 aa7.45□□□□□ -1.22
VTA1-203ENST00000452973 HIGD2AQ9BW72 106 aa7.45□□□□□ -1.22
VTA1-203ENST00000452973 C3orf84H3BNL1 204 aa7.45□□□□□ -1.22
VTA1-203ENST00000452973 Q6ZRN7 208 aaPredicted RBP7.45□□□□□ -1.22
VTA1-203ENST00000452973 LINC01547P58512 204 aaPredicted RBP7.44□□□□□ -1.22
VTA1-203ENST00000452973 C9orf163Q8N9P6 203 aa7.44□□□□□ -1.22
VTA1-203ENST00000452973 FBN3Q75N90 2809 aa7.44□□□□□ -1.22
VTA1-203ENST00000452973 DYNC2H1Q8NCM8 4307 aaKnown RBP7.43□□□□□ -1.22
VTA1-203ENST00000452973 PANO1I0J062 215 aa7.43□□□□□ -1.22
VTA1-203ENST00000452973 KRTAP11-1Q8IUC1 163 aa7.43□□□□□ -1.22
VTA1-203ENST00000452973 A0A0G2JQZ4 141 aa7.41□□□□□ -1.22
VTA1-203ENST00000452973 LY6G6CO95867 125 aa7.4□□□□□ -1.23
VTA1-203ENST00000452973 ATP5EP2Q5VTU8 51 aa7.4□□□□□ -1.23
VTA1-203ENST00000452973 KMT2AQ03164 3969 aa7.4□□□□□ -1.23
VTA1-203ENST00000452973 C1orf137Q5JT78 98 aa7.39□□□□□ -1.23
VTA1-203ENST00000452973 A0A087WTM6 91 aa7.38□□□□□ -1.23
VTA1-203ENST00000452973 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.38□□□□□ -1.23
VTA1-203ENST00000452973 IGLV5-48A0A075B6I7 105 aa7.38□□□□□ -1.23
VTA1-203ENST00000452973 ATOX1O00244 68 aa7.37□□□□□ -1.23
VTA1-203ENST00000452973 NREPQ16612 68 aa7.37□□□□□ -1.23
VTA1-203ENST00000452973 Q8N9L7 120 aa7.37□□□□□ -1.23
VTA1-203ENST00000452973 EPM2AB3EWF7 344 aa7.36□□□□□ -1.23
VTA1-203ENST00000452973 UBE2AP49459 152 aa7.36□□□□□ -1.23
VTA1-203ENST00000452973 A0A1W2PNM2 257 aa7.35□□□□□ -1.23
VTA1-203ENST00000452973 LINC00474Q9P2X8 69 aa7.35□□□□□ -1.23
VTA1-203ENST00000452973 F8WEM9 126 aa7.35□□□□□ -1.23
VTA1-203ENST00000452973 RTL8CO15255 209 aa7.34□□□□□ -1.23
VTA1-203ENST00000452973 C9orf153Q5TBE3 101 aa7.34□□□□□ -1.23
VTA1-203ENST00000452973 SMIM29Q86T20 159 aa7.34□□□□□ -1.23
VTA1-203ENST00000452973 TNP2Q05952 138 aa7.33□□□□□ -1.24
VTA1-203ENST00000452973 Q6ZR54 194 aa7.33□□□□□ -1.24
VTA1-203ENST00000452973 LINC00476Q8WZB0 136 aa7.33□□□□□ -1.24
VTA1-203ENST00000452973 VPS13DQ5THJ4 4388 aa7.33□□□□□ -1.24
VTA1-203ENST00000452973 C1orf134Q5TEV5 83 aa7.33□□□□□ -1.24
VTA1-203ENST00000452973 COX7CP15954 63 aa7.32□□□□□ -1.24
VTA1-203ENST00000452973 CXCL6P80162 114 aa7.32□□□□□ -1.24
VTA1-203ENST00000452973 PKIGQ9Y2B9 76 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms