RNA–Protein interactions for RNA: ENST00000448087.5

GTF3C3-205, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-205ENST00000448087 SPINK9Q5DT21 86 aa1.57□□□□□ -2.16
GTF3C3-205ENST00000448087 PTPRQQ9UMZ3 2332 aa1.56□□□□□ -2.16
GTF3C3-205ENST00000448087 IGKV2-40A0A087WW87 121 aaPredicted RBP1.56□□□□□ -2.16
GTF3C3-205ENST00000448087 TRGV1A0A0A0MS02 117 aa1.56□□□□□ -2.16
GTF3C3-205ENST00000448087 IGKV2D-40P01614 121 aaPredicted RBP1.56□□□□□ -2.16
GTF3C3-205ENST00000448087 LINC00158P58513 81 aa1.56□□□□□ -2.16
GTF3C3-205ENST00000448087 PRB3Q04118 309 aaPredicted RBP1.56□□□□□ -2.16
GTF3C3-205ENST00000448087 CRCT1Q9UGL9 99 aa1.56□□□□□ -2.16
GTF3C3-205ENST00000448087 A0A1B0GU69 56 aa1.55□□□□□ -2.16
GTF3C3-205ENST00000448087 Q6ZRN7 208 aaPredicted RBP1.55□□□□□ -2.16
GTF3C3-205ENST00000448087 DEFB106AQ8N104 65 aa1.55□□□□□ -2.16
GTF3C3-205ENST00000448087 KMT2BQ9UMN6 2715 aaPredicted RBP1.55□□□□□ -2.16
GTF3C3-205ENST00000448087 POLR2KP53803 58 aaKnown RBP1.54□□□□□ -2.16
GTF3C3-205ENST00000448087 RPL39P62891 51 aaKnown RBP1.54□□□□□ -2.16
GTF3C3-205ENST00000448087 C5orf56Q8N8D9 126 aa1.54□□□□□ -2.16
GTF3C3-205ENST00000448087 AHCTF1Q8WYP5 2266 aa1.54□□□□□ -2.16
GTF3C3-205ENST00000448087 A0A096LNT2 108 aa1.53□□□□□ -2.16
GTF3C3-205ENST00000448087 COX17Q14061 63 aa1.53□□□□□ -2.16
GTF3C3-205ENST00000448087 Q6ZQY7 126 aa1.53□□□□□ -2.16
GTF3C3-205ENST00000448087 RPL39LQ96EH5 51 aaKnown RBP1.53□□□□□ -2.16
GTF3C3-205ENST00000448087 PRO3102Q9H379 93 aa1.53□□□□□ -2.16
GTF3C3-205ENST00000448087 ABCA1O95477 2261 aa1.52□□□□□ -2.17
GTF3C3-205ENST00000448087 DEFB131BA0A096LNP1 70 aa1.52□□□□□ -2.17
GTF3C3-205ENST00000448087 RPL37AP61513 92 aaKnown RBP1.52□□□□□ -2.17
GTF3C3-205ENST00000448087 USF3Q68DE3 2245 aa1.52□□□□□ -2.17
GTF3C3-205ENST00000448087 URB1O60287 2271 aaKnown RBP1.52□□□□□ -2.17
GTF3C3-205ENST00000448087 BRWD1Q9NSI6 2320 aa1.52□□□□□ -2.17
GTF3C3-205ENST00000448087 PRCDQ00LT1 54 aa1.52□□□□□ -2.17
GTF3C3-205ENST00000448087 CDKN2A-AS1Q9UH64 79 aa1.52□□□□□ -2.17
GTF3C3-205ENST00000448087 KNL1Q8NG31 2342 aa1.51□□□□□ -2.17
GTF3C3-205ENST00000448087 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.51□□□□□ -2.179e-8■■■■■ 30.8
GTF3C3-205ENST00000448087 LINC00575Q6W349 94 aa1.51□□□□□ -2.17
GTF3C3-205ENST00000448087 Q8IZM0 81 aa1.51□□□□□ -2.17
GTF3C3-205ENST00000448087 C4orf3Q8WVX3 66 aa1.51□□□□□ -2.17
GTF3C3-205ENST00000448087 CCL19Q99731 98 aa1.51□□□□□ -2.17
GTF3C3-205ENST00000448087 RTTNQ86VV8 2226 aa1.5□□□□□ -2.17
GTF3C3-205ENST00000448087 TECTAO75443 2155 aa1.5□□□□□ -2.17
GTF3C3-205ENST00000448087 LEAP2Q969E1 77 aa1.5□□□□□ -2.17
GTF3C3-205ENST00000448087 CNTRLQ7Z7A1 2325 aa1.5□□□□□ -2.17
GTF3C3-205ENST00000448087 DOPEY2Q9Y3R5 2298 aa1.5□□□□□ -2.17
GTF3C3-205ENST00000448087 I3L2K1 104 aa1.49□□□□□ -2.17
GTF3C3-205ENST00000448087 SSBP3-AS1Q7Z2R9 100 aa1.49□□□□□ -2.17
GTF3C3-205ENST00000448087 CNOT1A5YKK6 2376 aaKnown RBP1.49□□□□□ -2.17
GTF3C3-205ENST00000448087 ASXL3Q9C0F0 2248 aa1.49□□□□□ -2.17
GTF3C3-205ENST00000448087 MRPL33O75394 65 aaKnown RBP1.49□□□□□ -2.17
GTF3C3-205ENST00000448087 ACYP2P14621 99 aa1.49□□□□□ -2.17
GTF3C3-205ENST00000448087 A0A0C4DFX4 3053 aa1.48□□□□□ -2.17
GTF3C3-205ENST00000448087 G3V318 75 aa1.48□□□□□ -2.17
GTF3C3-205ENST00000448087 K7EQZ3 153 aa1.47□□□□□ -2.17
GTF3C3-205ENST00000448087 LY6G6CO95867 125 aa1.47□□□□□ -2.17
GTF3C3-205ENST00000448087 ASCC3Q8N3C0 2202 aaKnown RBP1.47□□□□□ -2.17
GTF3C3-205ENST00000448087 ANGP03950 147 aaKnown RBP1.46□□□□□ -2.18
GTF3C3-205ENST00000448087 M0QY20 66 aa1.46□□□□□ -2.18
GTF3C3-205ENST00000448087 KRTAP4-1Q9BYQ7 146 aa1.46□□□□□ -2.18
GTF3C3-205ENST00000448087 CRIPTQ9P021 101 aa1.46□□□□□ -2.18
GTF3C3-205ENST00000448087 CACNA1EQ15878 2313 aa1.46□□□□□ -2.18
GTF3C3-205ENST00000448087 COX6A2Q02221 97 aa1.45□□□□□ -2.18
GTF3C3-205ENST00000448087 WT1-ASQ06250 92 aa1.45□□□□□ -2.18
GTF3C3-205ENST00000448087 C10orf55Q5SWW7 151 aa1.45□□□□□ -2.18
GTF3C3-205ENST00000448087 IGLV5-48A0A075B6I7 105 aa1.44□□□□□ -2.18
GTF3C3-205ENST00000448087 LYNX1G3V0Z9 82 aa1.44□□□□□ -2.18
GTF3C3-205ENST00000448087 SPTY2D1-AS1A0A0U1RR47 76 aa1.43□□□□□ -2.18
GTF3C3-205ENST00000448087 Q6ZRX8 168 aa1.43□□□□□ -2.18
GTF3C3-205ENST00000448087 DEFB104AQ8WTQ1 72 aa1.43□□□□□ -2.18
GTF3C3-205ENST00000448087 INE1O15225 51 aa1.43□□□□□ -2.18
GTF3C3-205ENST00000448087 RPL39P5Q59GN2 51 aa1.43□□□□□ -2.18
GTF3C3-205ENST00000448087 WFDC13Q8IUB5 93 aa1.43□□□□□ -2.18
GTF3C3-205ENST00000448087 TMEM167AQ8TBQ9 72 aa1.43□□□□□ -2.18
GTF3C3-205ENST00000448087 FLG2Q5D862 2391 aaPredicted RBP1.42□□□□□ -2.18
GTF3C3-205ENST00000448087 IGF2RP11717 2491 aa1.42□□□□□ -2.18
GTF3C3-205ENST00000448087 GVQW2A0A096LPI5 108 aaPredicted RBP1.42□□□□□ -2.18
GTF3C3-205ENST00000448087 H0YAA0 97 aa1.42□□□□□ -2.18
GTF3C3-205ENST00000448087 KRTAP21-3Q3LHN1 58 aa1.42□□□□□ -2.18
GTF3C3-205ENST00000448087 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.42□□□□□ -2.18
GTF3C3-205ENST00000448087 MINOS1Q5TGZ0 78 aa1.41□□□□□ -2.18
GTF3C3-205ENST00000448087 WFDC10BQ8IUB3 73 aa1.41□□□□□ -2.18
GTF3C3-205ENST00000448087 PLAC4Q8WY50 150 aa1.41□□□□□ -2.18
GTF3C3-205ENST00000448087 TP53AIP1Q9HCN2 124 aa1.41□□□□□ -2.18
GTF3C3-205ENST00000448087 C6orf48Q9UBA6 75 aa1.41□□□□□ -2.18
GTF3C3-205ENST00000448087 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
GTF3C3-205ENST00000448087 FBN3Q75N90 2809 aa1.41□□□□□ -2.18
GTF3C3-205ENST00000448087 REV3LO60673 3130 aa1.41□□□□□ -2.18
GTF3C3-205ENST00000448087 DEFB108AA8MXU0 73 aa1.4□□□□□ -2.18
GTF3C3-205ENST00000448087 COL6A6A6NMZ7 2263 aa1.4□□□□□ -2.18
GTF3C3-205ENST00000448087 NAV3Q8IVL0 2385 aa1.4□□□□□ -2.19
GTF3C3-205ENST00000448087 ALMS1Q8TCU4 4167 aa1.39□□□□□ -2.19
GTF3C3-205ENST00000448087 A8MTW9 85 aa1.39□□□□□ -2.19
GTF3C3-205ENST00000448087 STATHP02808 62 aa1.39□□□□□ -2.19
GTF3C3-205ENST00000448087 TPRP12270 2363 aaKnown RBP1.39□□□□□ -2.19
GTF3C3-205ENST00000448087 K7EIM0 57 aa1.38□□□□□ -2.19
GTF3C3-205ENST00000448087 Q6ZSA8 131 aa1.38□□□□□ -2.19
GTF3C3-205ENST00000448087 PIEZO2Q9H5I5 2752 aa1.38□□□□□ -2.19
GTF3C3-205ENST00000448087 MGAQ8IWI9 3026 aa1.38□□□□□ -2.19
GTF3C3-205ENST00000448087 CACNA1BQ00975 2339 aa1.38□□□□□ -2.19
GTF3C3-205ENST00000448087 MMP24-AS1A0A0U1RRL7 71 aa1.37□□□□□ -2.19
GTF3C3-205ENST00000448087 MRPL34Q9BQ48 92 aaKnown RBP1.37□□□□□ -2.19
GTF3C3-205ENST00000448087 C10orf95Q9H7T3 257 aa1.37□□□□□ -2.19
GTF3C3-205ENST00000448087 KAAG1Q9UBP8 84 aa1.37□□□□□ -2.19
GTF3C3-205ENST00000448087 ZDBF2Q9HCK1 2354 aa1.36□□□□□ -2.19
GTF3C3-205ENST00000448087 LELP1Q5T871 98 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms