RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 LCE1DQ5T752 114 aa1.33□□□□□ -2.2
UBBP3-201ENST00000445497 KAAG1Q9UBP8 84 aa1.33□□□□□ -2.2
UBBP3-201ENST00000445497 ABCA1O95477 2261 aa1.33□□□□□ -2.2
UBBP3-201ENST00000445497 CADP27708 2225 aa1.32□□□□□ -2.2
UBBP3-201ENST00000445497 SORL1Q92673 2214 aa1.32□□□□□ -2.2
UBBP3-201ENST00000445497 ASXL3Q9C0F0 2248 aa1.32□□□□□ -2.2
UBBP3-201ENST00000445497 DEFB130BP0DP73 79 aa1.32□□□□□ -2.2
UBBP3-201ENST00000445497 DEFB130AP0DP74 79 aa1.32□□□□□ -2.2
UBBP3-201ENST00000445497 KRTAP10-9P60411 292 aa1.32□□□□□ -2.2
UBBP3-201ENST00000445497 WT1-ASQ06250 92 aa1.32□□□□□ -2.2
UBBP3-201ENST00000445497 KRTAP2-2Q9BYT5 123 aa1.32□□□□□ -2.2
UBBP3-201ENST00000445497 MMP24-AS1A0A0U1RRL7 71 aa1.31□□□□□ -2.2
UBBP3-201ENST00000445497 A0A1B0GVY2 172 aa1.31□□□□□ -2.2
UBBP3-201ENST00000445497 KRTAP10-11P60412 298 aa1.31□□□□□ -2.2
UBBP3-201ENST00000445497 AHCTF1Q8WYP5 2266 aa1.31□□□□□ -2.2
UBBP3-201ENST00000445497 ASCC3Q8N3C0 2202 aaKnown RBP1.3□□□□□ -2.2
UBBP3-201ENST00000445497 K7EIL1 84 aa1.3□□□□□ -2.2
UBBP3-201ENST00000445497 DEFB103AP81534 67 aa1.3□□□□□ -2.2
UBBP3-201ENST00000445497 Q5VSD8 79 aa1.3□□□□□ -2.2
UBBP3-201ENST00000445497 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.3□□□□□ -2.2
UBBP3-201ENST00000445497 CNOT1A5YKK6 2376 aaKnown RBP1.3□□□□□ -2.2
UBBP3-201ENST00000445497 GPR179Q6PRD1 2367 aa1.3□□□□□ -2.2
UBBP3-201ENST00000445497 KRTAP4-8A0A0G2JLE6 195 aa1.29□□□□□ -2.2
UBBP3-201ENST00000445497 TOMM7Q9P0U1 55 aa1.29□□□□□ -2.2
UBBP3-201ENST00000445497 ICE1Q9Y2F5 2266 aa1.29□□□□□ -2.2
UBBP3-201ENST00000445497 WNK2Q9Y3S1 2297 aa1.29□□□□□ -2.2
UBBP3-201ENST00000445497 SPRR5A0A1B0GTR4 108 aa1.28□□□□□ -2.2
UBBP3-201ENST00000445497 DEFB119Q8N690 84 aa1.28□□□□□ -2.2
UBBP3-201ENST00000445497 PRO0255Q9UI72 69 aa1.28□□□□□ -2.2
UBBP3-201ENST00000445497 C10orf95Q9H7T3 257 aa1.27□□□□□ -2.21
UBBP3-201ENST00000445497 TPRP12270 2363 aaKnown RBP1.26□□□□□ -2.21
UBBP3-201ENST00000445497 SPRR1AP35321 89 aa1.26□□□□□ -2.21
UBBP3-201ENST00000445497 RPL39P5Q59GN2 51 aa1.26□□□□□ -2.21
UBBP3-201ENST00000445497 LCE1AQ5T7P2 110 aa1.26□□□□□ -2.21
UBBP3-201ENST00000445497 CLPSL2Q6UWE3 100 aa1.26□□□□□ -2.21
UBBP3-201ENST00000445497 KRTAP4-9Q9BYQ8 210 aa1.26□□□□□ -2.21
UBBP3-201ENST00000445497 NOP10Q9NPE3 64 aaKnown RBP1.26□□□□□ -2.21
UBBP3-201ENST00000445497 APLNQ9ULZ1 77 aa1.26□□□□□ -2.21
UBBP3-201ENST00000445497 FAM208BQ5VWN6 2430 aa1.26□□□□□ -2.21
UBBP3-201ENST00000445497 TRIOBPQ9H2D6 2365 aa1.26□□□□□ -2.21
UBBP3-201ENST00000445497 KNL1Q8NG31 2342 aa1.26□□□□□ -2.21
UBBP3-201ENST00000445497 KLK9Q2XQG4 91 aa1.25□□□□□ -2.21
UBBP3-201ENST00000445497 KRTAP13-3Q3SY46 172 aa1.25□□□□□ -2.21
UBBP3-201ENST00000445497 DEFB105AQ8NG35 78 aa1.25□□□□□ -2.21
UBBP3-201ENST00000445497 KRTAP1-5Q9BYS1 174 aa1.25□□□□□ -2.21
UBBP3-201ENST00000445497 BPTFQ12830 3046 aa1.25□□□□□ -2.21
UBBP3-201ENST00000445497 DOPEY2Q9Y3R5 2298 aa1.24□□□□□ -2.21
UBBP3-201ENST00000445497 CACNA1GO43497 2377 aa1.24□□□□□ -2.21
UBBP3-201ENST00000445497 A8MTW9 85 aa1.24□□□□□ -2.21
UBBP3-201ENST00000445497 KRTAP4-11Q9BYQ6 195 aa1.24□□□□□ -2.21
UBBP3-201ENST00000445497 KRTAP4-7Q9BYR0 210 aa1.24□□□□□ -2.21
UBBP3-201ENST00000445497 CACNA1BQ00975 2339 aa1.24□□□□□ -2.21
UBBP3-201ENST00000445497 PTPRQQ9UMZ3 2332 aa1.24□□□□□ -2.21
UBBP3-201ENST00000445497 DEFB108AA8MXU0 73 aa1.23□□□□□ -2.21
UBBP3-201ENST00000445497 KRTAP10-1P60331 282 aa1.23□□□□□ -2.21
UBBP3-201ENST00000445497 PRLHP81277 87 aa1.23□□□□□ -2.21
UBBP3-201ENST00000445497 LELP1Q5T871 98 aa1.23□□□□□ -2.21
UBBP3-201ENST00000445497 PLCE1Q9P212 2302 aa1.23□□□□□ -2.21
UBBP3-201ENST00000445497 FLG2Q5D862 2391 aaPredicted RBP1.22□□□□□ -2.21
UBBP3-201ENST00000445497 OTOGLQ3ZCN5 2332 aa1.22□□□□□ -2.21
UBBP3-201ENST00000445497 SPRR1BP22528 89 aa1.22□□□□□ -2.21
UBBP3-201ENST00000445497 KRTAP10-3P60369 221 aa1.22□□□□□ -2.21
UBBP3-201ENST00000445497 S4R3F8 94 aa1.21□□□□□ -2.22
UBBP3-201ENST00000445497 NAV3Q8IVL0 2385 aa1.2□□□□□ -2.22
UBBP3-201ENST00000445497 JMJD1CQ15652 2540 aa1.2□□□□□ -2.22
UBBP3-201ENST00000445497 DEFB104AQ8WTQ1 72 aa1.19□□□□□ -2.22
UBBP3-201ENST00000445497 KRTAP4-5Q9BYR2 181 aa1.19□□□□□ -2.22
UBBP3-201ENST00000445497 USF3Q68DE3 2245 aa1.19□□□□□ -2.22
UBBP3-201ENST00000445497 H3BUX3 64 aa1.18□□□□□ -2.22
UBBP3-201ENST00000445497 CNTRLQ7Z7A1 2325 aa1.18□□□□□ -2.22
UBBP3-201ENST00000445497 COL6A6A6NMZ7 2263 aa1.18□□□□□ -2.22
UBBP3-201ENST00000445497 LCE1FQ5T754 118 aa1.17□□□□□ -2.22
UBBP3-201ENST00000445497 KRTAP12-1P59990 96 aa1.16□□□□□ -2.22
UBBP3-201ENST00000445497 KRTAP4-2Q9BYR5 136 aa1.16□□□□□ -2.22
UBBP3-201ENST00000445497 PTPRZ1P23471 2315 aaPredicted RBP1.16□□□□□ -2.22
UBBP3-201ENST00000445497 PKDREJQ9NTG1 2253 aa1.15□□□□□ -2.22
UBBP3-201ENST00000445497 ZDBF2Q9HCK1 2354 aa1.15□□□□□ -2.22
UBBP3-201ENST00000445497 M0QZ58 72 aa1.15□□□□□ -2.23
UBBP3-201ENST00000445497 SPINK1P00995 79 aa1.15□□□□□ -2.23
UBBP3-201ENST00000445497 KRTAP9-8Q9BYQ0 159 aa1.15□□□□□ -2.23
UBBP3-201ENST00000445497 ALMS1Q8TCU4 4167 aa1.15□□□□□ -2.23
UBBP3-201ENST00000445497 ROS1P08922 2347 aa1.14□□□□□ -2.23
UBBP3-201ENST00000445497 PCNX1Q96RV3 2341 aa1.14□□□□□ -2.23
UBBP3-201ENST00000445497 H0YGG7 62 aa1.14□□□□□ -2.23
UBBP3-201ENST00000445497 PIEZO2Q9H5I5 2752 aa1.13□□□□□ -2.23
UBBP3-201ENST00000445497 J3QKU1 62 aa1.13□□□□□ -2.23
UBBP3-201ENST00000445497 KRTAP10-6P60371 365 aaPredicted RBP1.13□□□□□ -2.23
UBBP3-201ENST00000445497 KRTAP13-1Q8IUC0 172 aa1.13□□□□□ -2.23
UBBP3-201ENST00000445497 KRTAP10-10P60014 251 aa1.12□□□□□ -2.23
UBBP3-201ENST00000445497 COX14Q96I36 57 aa1.12□□□□□ -2.23
UBBP3-201ENST00000445497 ZNF462Q96JM2 2506 aa1.12□□□□□ -2.23
UBBP3-201ENST00000445497 BAHCC1Q9P281 2608 aa1.11□□□□□ -2.23
UBBP3-201ENST00000445497 A0A0D9SG42 100 aa1.11□□□□□ -2.23
UBBP3-201ENST00000445497 KRTAP21-3Q3LHN1 58 aa1.11□□□□□ -2.23
UBBP3-201ENST00000445497 RHPN1-AS1Q9BWJ2 59 aa1.1□□□□□ -2.23
UBBP3-201ENST00000445497 IGF2RP11717 2491 aa1.1□□□□□ -2.23
UBBP3-201ENST00000445497 APELAP0DMC3 54 aa1.09□□□□□ -2.23
UBBP3-201ENST00000445497 KRTAP12-4P60329 112 aa1.09□□□□□ -2.23
UBBP3-201ENST00000445497 CACNA1HO95180 2353 aa1.08□□□□□ -2.24
UBBP3-201ENST00000445497 C2CD3Q4AC94 2353 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms