RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 DHRS4-AS1Q9P1J3 65 aa10.05□□□□□ -0.8
SNX13-204ENST00000444712 A0A096LNI7 61 aa10.04□□□□□ -0.8
SNX13-204ENST00000444712 CCKP06307 115 aa10.04□□□□□ -0.8
SNX13-204ENST00000444712 RBM3P98179 157 aaKnown RBP10.04□□□□□ -0.8
SNX13-204ENST00000444712 ETDCA0A1B0GVM5 59 aa10.04□□□□□ -0.8
SNX13-204ENST00000444712 C9orf163Q8N9P6 203 aa10.04□□□□□ -0.8
SNX13-204ENST00000444712 C21orf62-AS1Q17RA5 79 aa10.03□□□□□ -0.8
SNX13-204ENST00000444712 SDIM1Q6ZPB5 146 aa10.03□□□□□ -0.8
SNX13-204ENST00000444712 LINC00643Q86TS7 51 aa10.03□□□□□ -0.8
SNX13-204ENST00000444712 KRTAP7-1Q8IUC3 87 aa10.03□□□□□ -0.8
SNX13-204ENST00000444712 RPL37AP8A6NKH3 93 aa10.02□□□□□ -0.8
SNX13-204ENST00000444712 PDE6GP18545 87 aa10.02□□□□□ -0.8
SNX13-204ENST00000444712 Q6ZRX8 168 aa10.02□□□□□ -0.8
SNX13-204ENST00000444712 Q6Q795 121 aa10.02□□□□□ -0.81
SNX13-204ENST00000444712 LINC00474Q9P2X8 69 aa10.02□□□□□ -0.81
SNX13-204ENST00000444712 IGKV2-24A0A0C4DH68 120 aa10.01□□□□□ -0.81
SNX13-204ENST00000444712 KRTAP4-16G5E9R7 235 aaPredicted RBP10.01□□□□□ -0.81
SNX13-204ENST00000444712 LOC110117498A0A087WWA1 95 aa10□□□□□ -0.81
SNX13-204ENST00000444712 B5MCH6 92 aa10□□□□□ -0.81
SNX13-204ENST00000444712 A0A1B0GV72 72 aa10□□□□□ -0.81
SNX13-204ENST00000444712 DSCR8Q96T75 97 aa10□□□□□ -0.81
SNX13-204ENST00000444712 M0R2N4 97 aa9.99□□□□□ -0.81
SNX13-204ENST00000444712 REG3GQ6UW15 175 aa9.99□□□□□ -0.81
SNX13-204ENST00000444712 Q6ZR54 194 aa9.99□□□□□ -0.81
SNX13-204ENST00000444712 CSMD3Q7Z407 3707 aa9.98□□□□□ -0.81
SNX13-204ENST00000444712 IMUPQ9GZP8 106 aa9.97□□□□□ -0.81
SNX13-204ENST00000444712 NDUFV3P56181 108 aaKnown RBP9.97□□□□□ -0.81
SNX13-204ENST00000444712 SMCR5Q8TEV8 140 aa9.97□□□□□ -0.81
SNX13-204ENST00000444712 PRKDCP78527 4128 aaKnown RBP9.96□□□□□ -0.81
SNX13-204ENST00000444712 TRBV7-7A0A0K0K1E9 115 aa9.96□□□□□ -0.81
SNX13-204ENST00000444712 Q6ZQT0 140 aa9.96□□□□□ -0.81
SNX13-204ENST00000444712 DNAH7Q8WXX0 4024 aa9.96□□□□□ -0.82
SNX13-204ENST00000444712 A0A1W2PNN7 141 aa9.95□□□□□ -0.82
SNX13-204ENST00000444712 A0A087WTM6 91 aa9.95□□□□□ -0.82
SNX13-204ENST00000444712 WWC2-AS2Q96NR7 200 aa9.95□□□□□ -0.82
SNX13-204ENST00000444712 MEGF8Q7Z7M0 2845 aa9.95□□□□□ -0.82
SNX13-204ENST00000444712 LYSTQ99698 3801 aa9.94□□□□□ -0.82
SNX13-204ENST00000444712 LINC00846Q9NV44 126 aa9.94□□□□□ -0.82
SNX13-204ENST00000444712 Q9BRP9 147 aa9.93□□□□□ -0.82
SNX13-204ENST00000444712 TRBV7-4A0A0J9YYF1 115 aa9.92□□□□□ -0.82
SNX13-204ENST00000444712 UBE2BP63146 152 aa9.92□□□□□ -0.82
SNX13-204ENST00000444712 C1orf134Q5TEV5 83 aa9.91□□□□□ -0.82
SNX13-204ENST00000444712 Q6JHZ5 121 aa9.91□□□□□ -0.82
SNX13-204ENST00000444712 PLECQ15149 4684 aaKnown RBP9.91□□□□□ -0.82
SNX13-204ENST00000444712 CHTF8P0CG12 524 aa9.9□□□□□ -0.82
SNX13-204ENST00000444712 UBL5Q9BZL1 73 aa9.9□□□□□ -0.82
SNX13-204ENST00000444712 IGLV5-48A0A075B6I7 105 aa9.89□□□□□ -0.83
SNX13-204ENST00000444712 LY6G6CO95867 125 aa9.89□□□□□ -0.83
SNX13-204ENST00000444712 Q8N377 158 aa9.89□□□□□ -0.83
SNX13-204ENST00000444712 ATP5EP2Q5VTU8 51 aa9.89□□□□□ -0.83
SNX13-204ENST00000444712 FAM19A1Q7Z5A9 133 aa9.89□□□□□ -0.83
SNX13-204ENST00000444712 DEFB105AQ8NG35 78 aa9.88□□□□□ -0.83
SNX13-204ENST00000444712 FBN3Q75N90 2809 aa9.88□□□□□ -0.83
SNX13-204ENST00000444712 LINC01547P58512 204 aaPredicted RBP9.87□□□□□ -0.83
SNX13-204ENST00000444712 STARD9Q9P2P6 4700 aa9.87□□□□□ -0.83
SNX13-204ENST00000444712 PHF5AQ7RTV0 110 aaKnown RBP9.87□□□□□ -0.83
SNX13-204ENST00000444712 LINC00476Q8WZB0 136 aa9.87□□□□□ -0.83
SNX13-204ENST00000444712 H0Y9J4 135 aa9.86□□□□□ -0.83
SNX13-204ENST00000444712 SPACA4Q8TDM5 124 aa9.86□□□□□ -0.83
SNX13-204ENST00000444712 VPS13DQ5THJ4 4388 aa9.86□□□□□ -0.83
SNX13-204ENST00000444712 RTL8CO15255 209 aa9.85□□□□□ -0.83
SNX13-204ENST00000444712 TENM2Q9NT68 2774 aa9.85□□□□□ -0.83
SNX13-204ENST00000444712 C3orf84H3BNL1 204 aa9.85□□□□□ -0.83
SNX13-204ENST00000444712 DPH3Q96FX2 82 aa9.85□□□□□ -0.83
SNX13-204ENST00000444712 DNAH10Q8IVF4 4471 aa9.84□□□□□ -0.83
SNX13-204ENST00000444712 EPM2AB3EWF7 344 aa9.83□□□□□ -0.84
SNX13-204ENST00000444712 ERC2-IT1O76042 136 aa9.82□□□□□ -0.84
SNX13-204ENST00000444712 A0A1B0GW54 56 aa9.82□□□□□ -0.84
SNX13-204ENST00000444712 ST20-AS1Q8NBB2 130 aa9.82□□□□□ -0.84
SNX13-204ENST00000444712 PRLHP81277 87 aa9.81□□□□□ -0.84
SNX13-204ENST00000444712 ANAPC13Q9BS18 74 aa9.81□□□□□ -0.84
SNX13-204ENST00000444712 IGLV5-52A0A0A0MRZ9 124 aa9.8□□□□□ -0.84
SNX13-204ENST00000444712 IGKV3D-7A0A0C4DH55 119 aa9.8□□□□□ -0.84
SNX13-204ENST00000444712 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.8□□□□□ -0.84
SNX13-204ENST00000444712 F8WEM9 126 aa9.79□□□□□ -0.84
SNX13-204ENST00000444712 PANO1I0J062 215 aa9.79□□□□□ -0.84
SNX13-204ENST00000444712 UBE2AP49459 152 aa9.79□□□□□ -0.84
SNX13-204ENST00000444712 TNP2Q05952 138 aa9.79□□□□□ -0.84
SNX13-204ENST00000444712 HIGD2AQ9BW72 106 aa9.79□□□□□ -0.84
SNX13-204ENST00000444712 BCE1O60756 84 aa9.78□□□□□ -0.84
SNX13-204ENST00000444712 Q6ZVQ6 151 aa9.78□□□□□ -0.84
SNX13-204ENST00000444712 FUSP35637 526 aaKnown RBP eCLIP9.77□□□□□ -0.85
SNX13-204ENST00000444712 FAM236AA0A1B0GUQ0 79 aa9.77□□□□□ -0.85
SNX13-204ENST00000444712 FAM236BA0A1B0GV22 79 aa9.77□□□□□ -0.85
SNX13-204ENST00000444712 C1orf137Q5JT78 98 aa9.76□□□□□ -0.85
SNX13-204ENST00000444712 KRTAP11-1Q8IUC1 163 aa9.76□□□□□ -0.85
SNX13-204ENST00000444712 C3orf22Q8N5N4 141 aa9.76□□□□□ -0.85
SNX13-204ENST00000444712 PLAC8Q9NZF1 115 aa9.75□□□□□ -0.85
SNX13-204ENST00000444712 CXCL6P80162 114 aa9.74□□□□□ -0.85
SNX13-204ENST00000444712 SMIM29Q86T20 159 aa9.73□□□□□ -0.85
SNX13-204ENST00000444712 SPRR1BP22528 89 aa9.73□□□□□ -0.85
SNX13-204ENST00000444712 HIST1H4AP62805 103 aaKnown RBP9.72□□□□□ -0.85
SNX13-204ENST00000444712 HAMPP81172 84 aa9.72□□□□□ -0.85
SNX13-204ENST00000444712 Q8NBF4 154 aa9.72□□□□□ -0.85
SNX13-204ENST00000444712 IGLV8-61A0A075B6I0 122 aa9.71□□□□□ -0.86
SNX13-204ENST00000444712 KRTAP13-1Q8IUC0 172 aa9.71□□□□□ -0.86
SNX13-204ENST00000444712 NREPQ16612 68 aa9.7□□□□□ -0.86
SNX13-204ENST00000444712 DNAH6Q9C0G6 4158 aa9.69□□□□□ -0.86
SNX13-204ENST00000444712 ATOX1O00244 68 aa9.69□□□□□ -0.86
SNX13-204ENST00000444712 SPRR4Q96PI1 79 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms