RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 SPRR4Q96PI1 79 aa3.38□□□□□ -1.87
SCN11A-202ENST00000444237 CSPG4Q6UVK1 2322 aa3.38□□□□□ -1.87
SCN11A-202ENST00000444237 J3QL48 77 aa3.38□□□□□ -1.87
SCN11A-202ENST00000444237 SPINK7P58062 85 aa3.38□□□□□ -1.87
SCN11A-202ENST00000444237 WWC2-AS2Q96NR7 200 aa3.37□□□□□ -1.87
SCN11A-202ENST00000444237 KRTAP21-3Q3LHN1 58 aa3.37□□□□□ -1.87
SCN11A-202ENST00000444237 PRR26Q8N8Z3 221 aa3.37□□□□□ -1.87
SCN11A-202ENST00000444237 IGLV1-50A0A075B6I6 118 aa3.37□□□□□ -1.87
SCN11A-202ENST00000444237 PLA2G1BP04054 148 aaKnown RBP3.36□□□□□ -1.87
SCN11A-202ENST00000444237 C9orf163Q8N9P6 203 aa3.36□□□□□ -1.87
SCN11A-202ENST00000444237 CRIPTQ9P021 101 aa3.36□□□□□ -1.87
SCN11A-202ENST00000444237 HIVEP2P31629 2446 aa3.35□□□□□ -1.87
SCN11A-202ENST00000444237 Q8NAQ8 132 aa3.35□□□□□ -1.87
SCN11A-202ENST00000444237 ZCCHC13Q8WW36 166 aaKnown RBP3.35□□□□□ -1.87
SCN11A-202ENST00000444237 CEP295Q9C0D2 2601 aa3.35□□□□□ -1.87
SCN11A-202ENST00000444237 DMAC1Q96GE9 116 aa3.35□□□□□ -1.87
SCN11A-202ENST00000444237 ANKRD11Q6UB99 2663 aaPredicted RBP3.35□□□□□ -1.87
SCN11A-202ENST00000444237 SPG11Q96JI7 2443 aa3.35□□□□□ -1.87
SCN11A-202ENST00000444237 A0A1B0GVX0 72 aa3.35□□□□□ -1.87
SCN11A-202ENST00000444237 LINC01556Q5JQF7 62 aa3.35□□□□□ -1.87
SCN11A-202ENST00000444237 CIRBP-AS1Q8TBR5 109 aa3.35□□□□□ -1.87
SCN11A-202ENST00000444237 CHD8Q9HCK8 2581 aa3.35□□□□□ -1.87
SCN11A-202ENST00000444237 SZT2Q5T011 3432 aa3.34□□□□□ -1.87
SCN11A-202ENST00000444237 SPTBN5Q9NRC6 3674 aaKnown RBP3.34□□□□□ -1.87
SCN11A-202ENST00000444237 PTPN13Q12923 2485 aa3.34□□□□□ -1.87
SCN11A-202ENST00000444237 PRUNE2Q8WUY3 3088 aa3.34□□□□□ -1.88
SCN11A-202ENST00000444237 ZNF462Q96JM2 2506 aa3.34□□□□□ -1.88
SCN11A-202ENST00000444237 X6R8D5 127 aa3.33□□□□□ -1.88
SCN11A-202ENST00000444237 H3BNG1 76 aa3.33□□□□□ -1.88
SCN11A-202ENST00000444237 PRR34Q9NV39 138 aa3.33□□□□□ -1.88
SCN11A-202ENST00000444237 A0A087X002 238 aa3.33□□□□□ -1.88
SCN11A-202ENST00000444237 HRES1P13985 223 aa3.33□□□□□ -1.88
SCN11A-202ENST00000444237 PKD1L2Q7Z442 2459 aa3.32□□□□□ -1.88
SCN11A-202ENST00000444237 NUPR2A6NF83 97 aa3.32□□□□□ -1.88
SCN11A-202ENST00000444237 LCE6AA0A183 80 aa3.32□□□□□ -1.88
SCN11A-202ENST00000444237 XIRP2A4UGR9 3374 aa3.32□□□□□ -1.88
SCN11A-202ENST00000444237 C15orf56Q8N910 161 aa3.32□□□□□ -1.88
SCN11A-202ENST00000444237 TLX1NBP0CAT3 122 aa3.31□□□□□ -1.88
SCN11A-202ENST00000444237 CNBPP62633 177 aaKnown RBP3.3□□□□□ -1.88
SCN11A-202ENST00000444237 LINC00612Q8N6U2 182 aa3.3□□□□□ -1.88
SCN11A-202ENST00000444237 TLN1Q9Y490 2541 aaKnown RBP3.3□□□□□ -1.88
SCN11A-202ENST00000444237 KRTAP1-3Q8IUG1 177 aa3.3□□□□□ -1.88
SCN11A-202ENST00000444237 KRTAP16-1A8MUX0 517 aa3.3□□□□□ -1.88
SCN11A-202ENST00000444237 LAMA2P24043 3122 aaKnown RBP3.29□□□□□ -1.88
SCN11A-202ENST00000444237 IGLV5-37A0A075B6J1 123 aa3.28□□□□□ -1.88
SCN11A-202ENST00000444237 FAM168BA1KXE4 195 aa3.28□□□□□ -1.88
SCN11A-202ENST00000444237 NAV2Q8IVL1 2488 aa3.28□□□□□ -1.88
SCN11A-202ENST00000444237 UNC80Q8N2C7 3258 aa3.28□□□□□ -1.88
SCN11A-202ENST00000444237 NOTCH2Q04721 2471 aa3.28□□□□□ -1.88
SCN11A-202ENST00000444237 HIVEP3Q5T1R4 2406 aa3.28□□□□□ -1.88
SCN11A-202ENST00000444237 A0A0G2JQZ4 141 aa3.28□□□□□ -1.88
SCN11A-202ENST00000444237 MMP24-AS1A0A0U1RRL7 71 aa3.28□□□□□ -1.88
SCN11A-202ENST00000444237 A0A1W2PNN7 141 aa3.28□□□□□ -1.88
SCN11A-202ENST00000444237 CSNK1G2-AS1Q8NCQ2 148 aa3.28□□□□□ -1.88
SCN11A-202ENST00000444237 COL6A3P12111 3177 aa3.28□□□□□ -1.88
SCN11A-202ENST00000444237 CHTF8P0CG12 524 aa3.28□□□□□ -1.88
SCN11A-202ENST00000444237 LUZP6Q538Z0 58 aa3.28□□□□□ -1.88
SCN11A-202ENST00000444237 BPTFQ12830 3046 aa3.28□□□□□ -1.89
SCN11A-202ENST00000444237 SPATA8Q6RVD6 105 aa3.27□□□□□ -1.89
SCN11A-202ENST00000444237 A8MU10 97 aa3.27□□□□□ -1.89
SCN11A-202ENST00000444237 Q8NDZ9 215 aa3.26□□□□□ -1.89
SCN11A-202ENST00000444237 KRTAP1-1Q07627 177 aa3.26□□□□□ -1.89
SCN11A-202ENST00000444237 A0A1B0GU33 70 aa3.24□□□□□ -1.89
SCN11A-202ENST00000444237 MYO9AB2RTY4 2548 aa3.24□□□□□ -1.89
SCN11A-202ENST00000444237 CCDC168Q8NDH2 2452 aa3.24□□□□□ -1.89
SCN11A-202ENST00000444237 EYSQ5T1H1 3165 aa3.24□□□□□ -1.89
SCN11A-202ENST00000444237 GIG44P09565 113 aaPredicted RBP3.24□□□□□ -1.89
SCN11A-202ENST00000444237 DNAH10OSP0CZ25 163 aa3.24□□□□□ -1.89
SCN11A-202ENST00000444237 EPG5Q9HCE0 2579 aa3.24□□□□□ -1.89
SCN11A-202ENST00000444237 KRTAP25-1Q3LHN0 102 aa3.24□□□□□ -1.89
SCN11A-202ENST00000444237 ZFYVE26Q68DK2 2539 aa3.23□□□□□ -1.89
SCN11A-202ENST00000444237 SONP18583 2426 aaKnown RBP3.23□□□□□ -1.89
SCN11A-202ENST00000444237 MYO18BQ8IUG5 2567 aa3.23□□□□□ -1.89
SCN11A-202ENST00000444237 KRTAP29-1A8MX34 341 aaPredicted RBP3.23□□□□□ -1.89
SCN11A-202ENST00000444237 ADM2Q7Z4H4 148 aa3.23□□□□□ -1.89
SCN11A-202ENST00000444237 APLNQ9ULZ1 77 aa3.23□□□□□ -1.89
SCN11A-202ENST00000444237 KRTAP10-3P60369 221 aa3.23□□□□□ -1.89
SCN11A-202ENST00000444237 FN1P02751 2386 aaKnown RBP3.23□□□□□ -1.89
SCN11A-202ENST00000444237 TNP2Q05952 138 aa3.22□□□□□ -1.89
SCN11A-202ENST00000444237 LINC00472Q9H8W2 130 aa3.22□□□□□ -1.89
SCN11A-202ENST00000444237 REV3LO60673 3130 aa3.22□□□□□ -1.89
SCN11A-202ENST00000444237 IGLV7-43P04211 117 aa3.22□□□□□ -1.89
SCN11A-202ENST00000444237 SPRR1AP35321 89 aa3.22□□□□□ -1.89
SCN11A-202ENST00000444237 ROMO1P60602 79 aa3.22□□□□□ -1.89
SCN11A-202ENST00000444237 AKAP13Q12802 2813 aa3.22□□□□□ -1.89
SCN11A-202ENST00000444237 Q6ZR54 194 aa3.22□□□□□ -1.89
SCN11A-202ENST00000444237 C19orf73Q9NVV2 129 aa3.22□□□□□ -1.89
SCN11A-202ENST00000444237 ANKRD17O75179 2603 aaKnown RBP3.22□□□□□ -1.89
SCN11A-202ENST00000444237 ZNF292O60281 2723 aa3.22□□□□□ -1.89
SCN11A-202ENST00000444237 BAHCC1Q9P281 2608 aa3.21□□□□□ -1.9
SCN11A-202ENST00000444237 DOPEY1Q5JWR5 2465 aa3.21□□□□□ -1.9
SCN11A-202ENST00000444237 SPACA4Q8TDM5 124 aa3.2□□□□□ -1.9
SCN11A-202ENST00000444237 FASNP49327 2511 aaKnown RBP3.2□□□□□ -1.9
SCN11A-202ENST00000444237 RTL8CO15255 209 aa3.2□□□□□ -1.9
SCN11A-202ENST00000444237 Q96NJ1 140 aa3.2□□□□□ -1.9
SCN11A-202ENST00000444237 CR1P17927 2039 aa3.2□□□□□ -1.9
SCN11A-202ENST00000444237 KRTAP10-11P60412 298 aa3.2□□□□□ -1.9
SCN11A-202ENST00000444237 USP24Q9UPU5 2620 aa3.19□□□□□ -1.9
SCN11A-202ENST00000444237 TRIOO75962 3097 aa3.18□□□□□ -1.9
SCN11A-202ENST00000444237 IGLV5-52A0A0A0MRZ9 124 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms