RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 DGAT2L7PQ6IED9 249 aa4.36□□□□□ -1.71
HDAC6-210ENST00000441703 C20orf197Q8N268 126 aa4.36□□□□□ -1.71
HDAC6-210ENST00000441703 KRTAP1-5Q9BYS1 174 aa4.36□□□□□ -1.71
HDAC6-210ENST00000441703 V9GYY9 64 aa4.36□□□□□ -1.71
HDAC6-210ENST00000441703 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.35□□□□□ -1.71
HDAC6-210ENST00000441703 IGKV2-29A2NJV5 120 aaPredicted RBP4.35□□□□□ -1.71
HDAC6-210ENST00000441703 A8MTW9 85 aa4.35□□□□□ -1.71
HDAC6-210ENST00000441703 SNRPD3P62318 126 aaKnown RBP4.35□□□□□ -1.71
HDAC6-210ENST00000441703 C1orf195Q5TG92 126 aa4.35□□□□□ -1.71
HDAC6-210ENST00000441703 FP248Q71RG6 208 aaPredicted RBP4.35□□□□□ -1.71
HDAC6-210ENST00000441703 LINC00528Q8N1L1 170 aa4.35□□□□□ -1.71
HDAC6-210ENST00000441703 LINC00337Q8N6G1 96 aa4.35□□□□□ -1.71
HDAC6-210ENST00000441703 UBL5Q9BZL1 73 aa4.35□□□□□ -1.71
HDAC6-210ENST00000441703 SND1-IT1Q9HBX3 110 aa4.35□□□□□ -1.71
HDAC6-210ENST00000441703 TRAV23DV6A0A075B6W5 121 aa4.34□□□□□ -1.71
HDAC6-210ENST00000441703 TMEM256-PLSCR3K7ERE1 68 aa4.34□□□□□ -1.71
HDAC6-210ENST00000441703 NCR3O14931 201 aa4.34□□□□□ -1.71
HDAC6-210ENST00000441703 LECT2O14960 151 aa4.34□□□□□ -1.71
HDAC6-210ENST00000441703 ERC2-IT1O76042 136 aa4.34□□□□□ -1.71
HDAC6-210ENST00000441703 RPL36AP83881 106 aaKnown RBP4.34□□□□□ -1.71
HDAC6-210ENST00000441703 SS18Q15532 418 aa4.34□□□□□ -1.71
HDAC6-210ENST00000441703 FAM19A1Q7Z5A9 133 aa4.34□□□□□ -1.71
HDAC6-210ENST00000441703 MIR7-3HGQ8N6C7 128 aa4.34□□□□□ -1.71
HDAC6-210ENST00000441703 RPL36ALQ969Q0 106 aaKnown RBP4.34□□□□□ -1.71
HDAC6-210ENST00000441703 LAMTOR3Q9UHA4 124 aa4.34□□□□□ -1.71
HDAC6-210ENST00000441703 LRP1Q07954 4544 aaKnown RBP4.34□□□□□ -1.71
HDAC6-210ENST00000441703 TRBV7-6A0A0J9YX20 115 aa4.33□□□□□ -1.72
HDAC6-210ENST00000441703 A0A0U1RRA0 63 aa4.33□□□□□ -1.72
HDAC6-210ENST00000441703 IBA57-AS1B1ANH7 110 aa4.33□□□□□ -1.72
HDAC6-210ENST00000441703 H3BQ85 93 aa4.33□□□□□ -1.72
HDAC6-210ENST00000441703 ENHOQ6UWT2 76 aa4.33□□□□□ -1.72
HDAC6-210ENST00000441703 FAT4Q6V0I7 4981 aa4.33□□□□□ -1.72
HDAC6-210ENST00000441703 PKHD1L1Q86WI1 4243 aa4.33□□□□□ -1.72
HDAC6-210ENST00000441703 FAT3Q8TDW7 4589 aa4.33□□□□□ -1.72
HDAC6-210ENST00000441703 A0A087WTM6 91 aa4.32□□□□□ -1.72
HDAC6-210ENST00000441703 LOC110117498A0A087WWA1 95 aa4.32□□□□□ -1.72
HDAC6-210ENST00000441703 IGLV5-52A0A0A0MRZ9 124 aa4.32□□□□□ -1.72
HDAC6-210ENST00000441703 K7EQD1 137 aa4.32□□□□□ -1.72
HDAC6-210ENST00000441703 DNAH10OSP0CZ25 163 aa4.32□□□□□ -1.72
HDAC6-210ENST00000441703 LRP2P98164 4655 aa4.32□□□□□ -1.72
HDAC6-210ENST00000441703 Q6ZRN7 208 aaPredicted RBP4.32□□□□□ -1.72
HDAC6-210ENST00000441703 COX7B2Q8TF08 81 aa4.32□□□□□ -1.72
HDAC6-210ENST00000441703 CDC42SE2Q9NRR3 84 aa4.32□□□□□ -1.72
HDAC6-210ENST00000441703 PKIGQ9Y2B9 76 aa4.32□□□□□ -1.72
HDAC6-210ENST00000441703 IGHV3-73A0A0B4J1V6 119 aa4.31□□□□□ -1.72
HDAC6-210ENST00000441703 TRBV10-1A0A0K0K1A3 114 aa4.31□□□□□ -1.72
HDAC6-210ENST00000441703 TRBV6-4A0A1B0GX49 114 aa4.31□□□□□ -1.72
HDAC6-210ENST00000441703 PDE6GP18545 87 aa4.31□□□□□ -1.72
HDAC6-210ENST00000441703 CXCL6P80162 114 aa4.31□□□□□ -1.72
HDAC6-210ENST00000441703 SPINK13Q1W4C9 94 aa4.31□□□□□ -1.72
HDAC6-210ENST00000441703 IGHV3-38A0A0C4DH36 116 aa4.3□□□□□ -1.72
HDAC6-210ENST00000441703 LYRM9A8MSI8 78 aa4.3□□□□□ -1.72
HDAC6-210ENST00000441703 F8WEM9 126 aa4.3□□□□□ -1.72
HDAC6-210ENST00000441703 LINC00158P58513 81 aa4.3□□□□□ -1.72
HDAC6-210ENST00000441703 RBM3P98179 157 aaKnown RBP4.3□□□□□ -1.72
HDAC6-210ENST00000441703 C1orf158Q8N1D5 194 aa4.3□□□□□ -1.72
HDAC6-210ENST00000441703 Q8N814 137 aa4.3□□□□□ -1.72
HDAC6-210ENST00000441703 SLPIP03973 132 aa4.29□□□□□ -1.72
HDAC6-210ENST00000441703 DEFB130BP0DP73 79 aa4.29□□□□□ -1.72
HDAC6-210ENST00000441703 DEFB130AP0DP74 79 aa4.29□□□□□ -1.72
HDAC6-210ENST00000441703 Q6ZQT0 140 aa4.29□□□□□ -1.72
HDAC6-210ENST00000441703 C11orf72Q8NBR9 251 aa4.29□□□□□ -1.72
HDAC6-210ENST00000441703 RMI2Q96E14 147 aa4.29□□□□□ -1.72
HDAC6-210ENST00000441703 Q9UF83 564 aa4.29□□□□□ -1.72
HDAC6-210ENST00000441703 IGKV3-20P01619 116 aa4.28□□□□□ -1.72
HDAC6-210ENST00000441703 LINC01547P58512 204 aaPredicted RBP4.28□□□□□ -1.72
HDAC6-210ENST00000441703 FAM30AQ9NZY2 134 aa4.28□□□□□ -1.72
HDAC6-210ENST00000441703 TRBV7-4A0A0J9YYF1 115 aa4.27□□□□□ -1.73
HDAC6-210ENST00000441703 PLAC8L1A1L4L8 177 aa4.27□□□□□ -1.73
HDAC6-210ENST00000441703 PAX4O43316 350 aa4.27□□□□□ -1.73
HDAC6-210ENST00000441703 NTM-AS1Q6ZSK4 140 aa4.27□□□□□ -1.73
HDAC6-210ENST00000441703 PRR15Q8IV56 129 aa4.27□□□□□ -1.73
HDAC6-210ENST00000441703 BRK1Q8WUW1 75 aa4.27□□□□□ -1.73
HDAC6-210ENST00000441703 LINC00474Q9P2X8 69 aa4.27□□□□□ -1.73
HDAC6-210ENST00000441703 A0A087WZ39 114 aa4.26□□□□□ -1.73
HDAC6-210ENST00000441703 A0A0U1RQV1 116 aa4.26□□□□□ -1.73
HDAC6-210ENST00000441703 ZNF561-AS1K7EIQ3 104 aa4.26□□□□□ -1.73
HDAC6-210ENST00000441703 ESRGQ1W209 222 aa4.26□□□□□ -1.73
HDAC6-210ENST00000441703 Q6ZVQ6 151 aa4.26□□□□□ -1.73
HDAC6-210ENST00000441703 SNURFQ9Y675 71 aa4.26□□□□□ -1.73
HDAC6-210ENST00000441703 IGHV3OR16-9A0A0B4J2B5 98 aa4.25□□□□□ -1.73
HDAC6-210ENST00000441703 INSP01308 110 aa4.25□□□□□ -1.73
HDAC6-210ENST00000441703 LINC00575Q6W349 94 aa4.25□□□□□ -1.73
HDAC6-210ENST00000441703 Q6ZRU5 148 aa4.25□□□□□ -1.73
HDAC6-210ENST00000441703 H3BNG1 76 aa4.24□□□□□ -1.73
HDAC6-210ENST00000441703 UBE2L6O14933 153 aa4.24□□□□□ -1.73
HDAC6-210ENST00000441703 PSCAO43653 123 aa4.24□□□□□ -1.73
HDAC6-210ENST00000441703 PMAIP1Q13794 54 aa4.24□□□□□ -1.73
HDAC6-210ENST00000441703 C6orf226Q5I0X4 101 aa4.24□□□□□ -1.73
HDAC6-210ENST00000441703 Q6ZTI0 123 aa4.24□□□□□ -1.73
HDAC6-210ENST00000441703 TMEM254Q8TBM7 123 aa4.24□□□□□ -1.73
HDAC6-210ENST00000441703 DNAH8Q96JB1 4490 aa4.24□□□□□ -1.73
HDAC6-210ENST00000441703 COX17Q14061 63 aa4.23□□□□□ -1.73
HDAC6-210ENST00000441703 NREPQ16612 68 aa4.23□□□□□ -1.73
HDAC6-210ENST00000441703 LELP1Q5T871 98 aa4.23□□□□□ -1.73
HDAC6-210ENST00000441703 Q8N3U1 123 aa4.23□□□□□ -1.73
HDAC6-210ENST00000441703 TOMM7Q9P0U1 55 aa4.23□□□□□ -1.73
HDAC6-210ENST00000441703 TNXBP22105 4242 aa4.22□□□□□ -1.73
HDAC6-210ENST00000441703 PRYO14603 147 aa4.22□□□□□ -1.73
HDAC6-210ENST00000441703 PRM2P04554 102 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms