RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 KRTAP7-1Q8IUC3 87 aa9.62□□□□□ -0.87
CPSF7-205ENST00000439958 C9orf163Q8N9P6 203 aa9.62□□□□□ -0.87
CPSF7-205ENST00000439958 HIGD2AQ9BW72 106 aa9.61□□□□□ -0.87
CPSF7-205ENST00000439958 SRRM2Q9UQ35 2752 aaKnown RBP9.61□□□□□ -0.87
CPSF7-205ENST00000439958 RTL8CO15255 209 aa9.61□□□□□ -0.87
CPSF7-205ENST00000439958 PRLHP81277 87 aa9.61□□□□□ -0.87
CPSF7-205ENST00000439958 CBY1Q9Y3M2 126 aa9.61□□□□□ -0.87
CPSF7-205ENST00000439958 IGLV5-52A0A0A0MRZ9 124 aa9.6□□□□□ -0.87
CPSF7-205ENST00000439958 PANO1I0J062 215 aa9.6□□□□□ -0.87
CPSF7-205ENST00000439958 ELOF1P60002 83 aaKnown RBP9.6□□□□□ -0.87
CPSF7-205ENST00000439958 FAM19A1Q7Z5A9 133 aa9.6□□□□□ -0.87
CPSF7-205ENST00000439958 TMEM256-PLSCR3K7ERE1 68 aa9.6□□□□□ -0.87
CPSF7-205ENST00000439958 TNP2Q05952 138 aa9.6□□□□□ -0.87
CPSF7-205ENST00000439958 IGLV1-50A0A075B6I6 118 aa9.59□□□□□ -0.87
CPSF7-205ENST00000439958 Q6ZR54 194 aa9.59□□□□□ -0.87
CPSF7-205ENST00000439958 INAFM2P0DMQ5 153 aa9.58□□□□□ -0.88
CPSF7-205ENST00000439958 REG3GQ6UW15 175 aa9.57□□□□□ -0.88
CPSF7-205ENST00000439958 KCNQ1DNQ9H478 68 aa9.57□□□□□ -0.88
CPSF7-205ENST00000439958 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.57□□□□□ -0.88
CPSF7-205ENST00000439958 HAMPP81172 84 aa9.57□□□□□ -0.88
CPSF7-205ENST00000439958 SDIM1Q6ZPB5 146 aa9.57□□□□□ -0.88
CPSF7-205ENST00000439958 C3orf22Q8N5N4 141 aa9.56□□□□□ -0.88
CPSF7-205ENST00000439958 LINC00528Q8N1L1 170 aa9.56□□□□□ -0.88
CPSF7-205ENST00000439958 DYNC2H1Q8NCM8 4307 aaKnown RBP9.55□□□□□ -0.88
CPSF7-205ENST00000439958 A0A1B0GX51 115 aa9.55□□□□□ -0.88
CPSF7-205ENST00000439958 VPS13DQ5THJ4 4388 aa9.55□□□□□ -0.88
CPSF7-205ENST00000439958 ST20-AS1Q8NBB2 130 aa9.55□□□□□ -0.88
CPSF7-205ENST00000439958 SIGMAR1Q99720 223 aa9.54□□□□□ -0.88
CPSF7-205ENST00000439958 C3orf84H3BNL1 204 aa9.54□□□□□ -0.88
CPSF7-205ENST00000439958 PRYO14603 147 aa9.53□□□□□ -0.88
CPSF7-205ENST00000439958 Q6ZRX8 168 aa9.53□□□□□ -0.88
CPSF7-205ENST00000439958 PLA2G2DQ9UNK4 145 aa9.53□□□□□ -0.88
CPSF7-205ENST00000439958 RBM3P98179 157 aaKnown RBP9.53□□□□□ -0.88
CPSF7-205ENST00000439958 UBE2AP49459 152 aa9.52□□□□□ -0.88
CPSF7-205ENST00000439958 MT-ATP8P03928 68 aa9.52□□□□□ -0.89
CPSF7-205ENST00000439958 C21orf62-AS1Q17RA5 79 aa9.52□□□□□ -0.89
CPSF7-205ENST00000439958 CDIP1Q9H305 208 aa9.52□□□□□ -0.89
CPSF7-205ENST00000439958 XGP55808 180 aa9.52□□□□□ -0.89
CPSF7-205ENST00000439958 LINC00474Q9P2X8 69 aa9.52□□□□□ -0.89
CPSF7-205ENST00000439958 ERC2-IT1O76042 136 aa9.51□□□□□ -0.89
CPSF7-205ENST00000439958 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.51□□□□□ -0.89
CPSF7-205ENST00000439958 DSCR8Q96T75 97 aa9.51□□□□□ -0.89
CPSF7-205ENST00000439958 Q9BRP9 147 aa9.51□□□□□ -0.89
CPSF7-205ENST00000439958 B5MCH6 92 aa9.5□□□□□ -0.89
CPSF7-205ENST00000439958 KRTAP11-1Q8IUC1 163 aa9.5□□□□□ -0.89
CPSF7-205ENST00000439958 JMJD7-PLA2G4BH0Y9G9 81 aa9.49□□□□□ -0.89
CPSF7-205ENST00000439958 IGLV5-37A0A075B6J1 123 aa9.49□□□□□ -0.89
CPSF7-205ENST00000439958 DHRS4-AS1Q9P1J3 65 aa9.48□□□□□ -0.89
CPSF7-205ENST00000439958 PKIGQ9Y2B9 76 aa9.48□□□□□ -0.89
CPSF7-205ENST00000439958 NDUFV3P56181 108 aaKnown RBP9.48□□□□□ -0.89
CPSF7-205ENST00000439958 KRTAP10-2P60368 255 aa9.48□□□□□ -0.89
CPSF7-205ENST00000439958 TRBV7-6A0A0J9YX20 115 aa9.47□□□□□ -0.89
CPSF7-205ENST00000439958 GHRHP01286 108 aa9.47□□□□□ -0.89
CPSF7-205ENST00000439958 DNAH2Q9P225 4427 aa9.45□□□□□ -0.9
CPSF7-205ENST00000439958 PCP4P48539 62 aa9.44□□□□□ -0.9
CPSF7-205ENST00000439958 SPACA4Q8TDM5 124 aa9.44□□□□□ -0.9
CPSF7-205ENST00000439958 LINC01600Q96MT4 127 aa9.44□□□□□ -0.9
CPSF7-205ENST00000439958 EPM2AB3EWF7 344 aa9.44□□□□□ -0.9
CPSF7-205ENST00000439958 SMCR5Q8TEV8 140 aa9.44□□□□□ -0.9
CPSF7-205ENST00000439958 Q8N377 158 aa9.43□□□□□ -0.9
CPSF7-205ENST00000439958 LINC00846Q9NV44 126 aa9.43□□□□□ -0.9
CPSF7-205ENST00000439958 IGKV3D-7A0A0C4DH55 119 aa9.42□□□□□ -0.9
CPSF7-205ENST00000439958 A0A0G2JQZ4 141 aa9.42□□□□□ -0.9
CPSF7-205ENST00000439958 KRTAP4-16G5E9R7 235 aaPredicted RBP9.42□□□□□ -0.9
CPSF7-205ENST00000439958 SPRR1AP35321 89 aa9.42□□□□□ -0.9
CPSF7-205ENST00000439958 HYDINQ4G0P3 5121 aa9.41□□□□□ -0.9
CPSF7-205ENST00000439958 C1orf137Q5JT78 98 aa9.41□□□□□ -0.9
CPSF7-205ENST00000439958 F8WEM9 126 aa9.4□□□□□ -0.9
CPSF7-205ENST00000439958 CCKP06307 115 aa9.4□□□□□ -0.9
CPSF7-205ENST00000439958 ACYP1P07311 99 aa9.39□□□□□ -0.91
CPSF7-205ENST00000439958 FAM30AQ9NZY2 134 aa9.38□□□□□ -0.91
CPSF7-205ENST00000439958 FAM240AA0A1B0GVK7 77 aa9.38□□□□□ -0.91
CPSF7-205ENST00000439958 OBSCN-AS1Q96MR7 158 aa9.37□□□□□ -0.91
CPSF7-205ENST00000439958 Q6ZQT0 140 aa9.36□□□□□ -0.91
CPSF7-205ENST00000439958 PSORS1C2Q9UIG4 136 aa9.36□□□□□ -0.91
CPSF7-205ENST00000439958 HIST1H4AP62805 103 aaKnown RBP9.35□□□□□ -0.91
CPSF7-205ENST00000439958 UBL5Q9BZL1 73 aa9.35□□□□□ -0.91
CPSF7-205ENST00000439958 H3BQ85 93 aa9.35□□□□□ -0.91
CPSF7-205ENST00000439958 SCXQ7RTU7 201 aa9.35□□□□□ -0.91
CPSF7-205ENST00000439958 BCE1O60756 84 aa9.34□□□□□ -0.91
CPSF7-205ENST00000439958 CIRBP-AS1Q8TBR5 109 aa9.33□□□□□ -0.92
CPSF7-205ENST00000439958 IGLV9-49A0A0B4J1Y8 123 aa9.32□□□□□ -0.92
CPSF7-205ENST00000439958 KRTAP10-1P60331 282 aa9.32□□□□□ -0.92
CPSF7-205ENST00000439958 ANAPC11Q9NYG5 84 aa9.32□□□□□ -0.92
CPSF7-205ENST00000439958 LINC00643Q86TS7 51 aa9.32□□□□□ -0.92
CPSF7-205ENST00000439958 LINC01547P58512 204 aaPredicted RBP9.31□□□□□ -0.92
CPSF7-205ENST00000439958 HECTD4Q9Y4D8 3996 aa9.3□□□□□ -0.92
CPSF7-205ENST00000439958 DNAH6Q9C0G6 4158 aa9.3□□□□□ -0.92
CPSF7-205ENST00000439958 C9orf153Q5TBE3 101 aa9.3□□□□□ -0.92
CPSF7-205ENST00000439958 PLAC8Q9NZF1 115 aa9.29□□□□□ -0.92
CPSF7-205ENST00000439958 DNAH11Q96DT5 4516 aa9.29□□□□□ -0.92
CPSF7-205ENST00000439958 LCE6AA0A183 80 aa9.28□□□□□ -0.92
CPSF7-205ENST00000439958 LOC110117498A0A087WWA1 95 aa9.28□□□□□ -0.92
CPSF7-205ENST00000439958 TRBV7-4A0A0J9YYF1 115 aa9.28□□□□□ -0.92
CPSF7-205ENST00000439958 PDE6GP18545 87 aa9.28□□□□□ -0.92
CPSF7-205ENST00000439958 A0A087WVE0 104 aa9.27□□□□□ -0.93
CPSF7-205ENST00000439958 HRCT1Q6UXD1 115 aa9.26□□□□□ -0.93
CPSF7-205ENST00000439958 IGLV5-48A0A075B6I7 105 aa9.26□□□□□ -0.93
CPSF7-205ENST00000439958 NREPQ16612 68 aa9.25□□□□□ -0.93
CPSF7-205ENST00000439958 Q6ZVQ6 151 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms