RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 CNFNQ9BYD5 112 aa1.42□□□□□ -2.18
LSM1P1-201ENST00000438629 MED13LQ71F56 2210 aa1.42□□□□□ -2.18
LSM1P1-201ENST00000438629 NDUFA1O15239 70 aa1.41□□□□□ -2.18
LSM1P1-201ENST00000438629 ANGP03950 147 aaKnown RBP1.41□□□□□ -2.18
LSM1P1-201ENST00000438629 KRTAP21-3Q3LHN1 58 aa1.41□□□□□ -2.18
LSM1P1-201ENST00000438629 PLAC4Q8WY50 150 aa1.41□□□□□ -2.18
LSM1P1-201ENST00000438629 LOC730098B7Z3J9 87 aa1.4□□□□□ -2.19
LSM1P1-201ENST00000438629 C10orf99Q6UWK7 81 aa1.4□□□□□ -2.19
LSM1P1-201ENST00000438629 Q8IZM0 81 aa1.4□□□□□ -2.19
LSM1P1-201ENST00000438629 DEFB119Q8N690 84 aa1.4□□□□□ -2.19
LSM1P1-201ENST00000438629 ARHGAP5-AS1Q96IT6 56 aa1.4□□□□□ -2.19
LSM1P1-201ENST00000438629 TTTY10Q9BZA0 68 aa1.4□□□□□ -2.19
LSM1P1-201ENST00000438629 PRO3102Q9H379 93 aa1.4□□□□□ -2.19
LSM1P1-201ENST00000438629 GOLGA4Q13439 2230 aaKnown RBP1.4□□□□□ -2.19
LSM1P1-201ENST00000438629 ICE1Q9Y2F5 2266 aa1.4□□□□□ -2.19
LSM1P1-201ENST00000438629 KRTAP5-8O75690 187 aa1.39□□□□□ -2.19
LSM1P1-201ENST00000438629 PRB3Q04118 309 aaPredicted RBP1.39□□□□□ -2.19
LSM1P1-201ENST00000438629 LINC00575Q6W349 94 aa1.39□□□□□ -2.19
LSM1P1-201ENST00000438629 CDKN2A-AS1Q9UH64 79 aa1.39□□□□□ -2.19
LSM1P1-201ENST00000438629 RTTNQ86VV8 2226 aa1.38□□□□□ -2.19
LSM1P1-201ENST00000438629 TECTAO75443 2155 aa1.37□□□□□ -2.19
LSM1P1-201ENST00000438629 CADP27708 2225 aa1.36□□□□□ -2.19
LSM1P1-201ENST00000438629 LINC01590Q5TEZ4 76 aa1.36□□□□□ -2.19
LSM1P1-201ENST00000438629 CRIPTQ9P021 101 aa1.36□□□□□ -2.19
LSM1P1-201ENST00000438629 FN1P02751 2386 aaKnown RBP1.36□□□□□ -2.19
LSM1P1-201ENST00000438629 MUC6Q6W4X9 2439 aa1.36□□□□□ -2.19
LSM1P1-201ENST00000438629 ABCA1O95477 2261 aa1.36□□□□□ -2.19
LSM1P1-201ENST00000438629 SORL1Q92673 2214 aa1.35□□□□□ -2.19
LSM1P1-201ENST00000438629 SPINK13Q1W4C9 94 aa1.35□□□□□ -2.19
LSM1P1-201ENST00000438629 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
LSM1P1-201ENST00000438629 LYNX1G3V0Z9 82 aa1.34□□□□□ -2.19
LSM1P1-201ENST00000438629 RPL37P61927 97 aaKnown RBP1.34□□□□□ -2.19
LSM1P1-201ENST00000438629 UBE2DNLQ8IWF7 75 aa1.34□□□□□ -2.19
LSM1P1-201ENST00000438629 BPTFQ12830 3046 aa1.33□□□□□ -2.2
LSM1P1-201ENST00000438629 MRPL34Q9BQ48 92 aaKnown RBP1.33□□□□□ -2.2
LSM1P1-201ENST00000438629 OTOGLQ3ZCN5 2332 aa1.32□□□□□ -2.2
LSM1P1-201ENST00000438629 H3BSH0 61 aa1.32□□□□□ -2.2
LSM1P1-201ENST00000438629 K7EQZ3 153 aa1.32□□□□□ -2.2
LSM1P1-201ENST00000438629 MINOS1Q5TGZ0 78 aa1.32□□□□□ -2.2
LSM1P1-201ENST00000438629 C6orf48Q9UBA6 75 aa1.32□□□□□ -2.2
LSM1P1-201ENST00000438629 ALMS1Q8TCU4 4167 aa1.32□□□□□ -2.2
LSM1P1-201ENST00000438629 URB1O60287 2271 aaKnown RBP1.31□□□□□ -2.2
LSM1P1-201ENST00000438629 H0YAA0 97 aa1.31□□□□□ -2.2
LSM1P1-201ENST00000438629 ANKRD17O75179 2603 aaKnown RBP1.31□□□□□ -2.2
LSM1P1-201ENST00000438629 I3L2K1 104 aa1.3□□□□□ -2.2
LSM1P1-201ENST00000438629 POLR2KP53803 58 aaKnown RBP1.3□□□□□ -2.2
LSM1P1-201ENST00000438629 RPL39P62891 51 aaKnown RBP1.3□□□□□ -2.2
LSM1P1-201ENST00000438629 USMG5Q96IX5 58 aa1.3□□□□□ -2.2
LSM1P1-201ENST00000438629 TP53AIP1Q9HCN2 124 aa1.3□□□□□ -2.2
LSM1P1-201ENST00000438629 LYNX1P0DP58 116 aa1.29□□□□□ -2.2
LSM1P1-201ENST00000438629 COX6B2Q6YFQ2 88 aa1.29□□□□□ -2.2
LSM1P1-201ENST00000438629 WFDC13Q8IUB5 93 aa1.29□□□□□ -2.2
LSM1P1-201ENST00000438629 DEFB123Q8N688 67 aa1.29□□□□□ -2.2
LSM1P1-201ENST00000438629 RPL39LQ96EH5 51 aaKnown RBP1.29□□□□□ -2.2
LSM1P1-201ENST00000438629 C10orf95Q9H7T3 257 aa1.29□□□□□ -2.2
LSM1P1-201ENST00000438629 KNTC1P50748 2209 aa1.28□□□□□ -2.2
LSM1P1-201ENST00000438629 ASXL3Q9C0F0 2248 aa1.28□□□□□ -2.2
LSM1P1-201ENST00000438629 CCL22O00626 93 aa1.28□□□□□ -2.2
LSM1P1-201ENST00000438629 PIGYQ3MUY2 71 aa1.27□□□□□ -2.21
LSM1P1-201ENST00000438629 SPINK9Q5DT21 86 aa1.27□□□□□ -2.21
LSM1P1-201ENST00000438629 LELP1Q5T871 98 aa1.27□□□□□ -2.21
LSM1P1-201ENST00000438629 WFDC10BQ8IUB3 73 aa1.27□□□□□ -2.21
LSM1P1-201ENST00000438629 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.26□□□□□ -2.21
LSM1P1-201ENST00000438629 RPS27P42677 84 aaKnown RBP1.26□□□□□ -2.21
LSM1P1-201ENST00000438629 CACNA1EQ15878 2313 aa1.26□□□□□ -2.21
LSM1P1-201ENST00000438629 CNOT1A5YKK6 2376 aaKnown RBP1.25□□□□□ -2.21
LSM1P1-201ENST00000438629 IGLV5-48A0A075B6I7 105 aa1.25□□□□□ -2.21
LSM1P1-201ENST00000438629 PRCDQ00LT1 54 aa1.25□□□□□ -2.21
LSM1P1-201ENST00000438629 COX6A2Q02221 97 aa1.25□□□□□ -2.21
LSM1P1-201ENST00000438629 Q6ZSA8 131 aa1.25□□□□□ -2.21
LSM1P1-201ENST00000438629 PTPRQQ9UMZ3 2332 aa1.24□□□□□ -2.21
LSM1P1-201ENST00000438629 H1FX-AS1Q4G0G2 97 aa1.24□□□□□ -2.21
LSM1P1-201ENST00000438629 LEAP2Q969E1 77 aa1.24□□□□□ -2.21
LSM1P1-201ENST00000438629 K7EIL1 84 aa1.23□□□□□ -2.21
LSM1P1-201ENST00000438629 KAAG1Q9UBP8 84 aa1.23□□□□□ -2.21
LSM1P1-201ENST00000438629 CRCT1Q9UGL9 99 aa1.23□□□□□ -2.21
LSM1P1-201ENST00000438629 DOPEY2Q9Y3R5 2298 aa1.22□□□□□ -2.21
LSM1P1-201ENST00000438629 MMP24-AS1A0A0U1RRL7 71 aa1.22□□□□□ -2.21
LSM1P1-201ENST00000438629 DEFB130BP0DP73 79 aa1.22□□□□□ -2.21
LSM1P1-201ENST00000438629 DEFB130AP0DP74 79 aa1.22□□□□□ -2.21
LSM1P1-201ENST00000438629 ASCC3Q8N3C0 2202 aaKnown RBP1.21□□□□□ -2.21
LSM1P1-201ENST00000438629 CACNA1BQ00975 2339 aa1.21□□□□□ -2.22
LSM1P1-201ENST00000438629 AHCTF1Q8WYP5 2266 aa1.21□□□□□ -2.22
LSM1P1-201ENST00000438629 PDE4DIPQ5VU43 2346 aa1.2□□□□□ -2.22
LSM1P1-201ENST00000438629 M0QY20 66 aa1.2□□□□□ -2.22
LSM1P1-201ENST00000438629 DEFB131AP59861 70 aa1.2□□□□□ -2.22
LSM1P1-201ENST00000438629 PRO0255Q9UI72 69 aa1.2□□□□□ -2.22
LSM1P1-201ENST00000438629 SPRR1AP35321 89 aa1.19□□□□□ -2.22
LSM1P1-201ENST00000438629 APLNQ9ULZ1 77 aa1.19□□□□□ -2.22
LSM1P1-201ENST00000438629 HELZ2Q9BYK8 2649 aaKnown RBP1.19□□□□□ -2.22
LSM1P1-201ENST00000438629 WT1-ASQ06250 92 aa1.18□□□□□ -2.22
LSM1P1-201ENST00000438629 DEFB105AQ8NG35 78 aa1.18□□□□□ -2.22
LSM1P1-201ENST00000438629 COL6A6A6NMZ7 2263 aa1.18□□□□□ -2.22
LSM1P1-201ENST00000438629 FAM208BQ5VWN6 2430 aa1.17□□□□□ -2.22
LSM1P1-201ENST00000438629 FBN3Q75N90 2809 aa1.17□□□□□ -2.22
LSM1P1-201ENST00000438629 FLG2Q5D862 2391 aaPredicted RBP1.16□□□□□ -2.22
LSM1P1-201ENST00000438629 Q5VSD8 79 aa1.16□□□□□ -2.22
LSM1P1-201ENST00000438629 TOMM7Q9P0U1 55 aa1.16□□□□□ -2.22
LSM1P1-201ENST00000438629 KNL1Q8NG31 2342 aa1.16□□□□□ -2.22
LSM1P1-201ENST00000438629 A8MTW9 85 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 420 ms