RNA–Protein interactions for RNA: ENST00000435815.1

SNRPEP4-201, Transcript of small nuclear ribonucleoprotein polypeptide E pseudogene 4, humanhuman

BASIC

Gene SNRPEP4, Length 279 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP4-201ENST00000435815 SORL1Q92673 2214 aa1.21□□□□□ -2.22
SNRPEP4-201ENST00000435815 GOLGA4Q13439 2230 aaKnown RBP1.2□□□□□ -2.22
SNRPEP4-201ENST00000435815 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.2□□□□□ -2.22
SNRPEP4-201ENST00000435815 FXYD6P3P58550 94 aa1.2□□□□□ -2.22
SNRPEP4-201ENST00000435815 CDC42BPAQ5VT25 1732 aa1.2□□□□□ -2.22
SNRPEP4-201ENST00000435815 CACNA1EQ15878 2313 aa1.2□□□□□ -2.22
SNRPEP4-201ENST00000435815 KIF21BO75037 1637 aa1.19□□□□□ -2.22
SNRPEP4-201ENST00000435815 ASH1LQ9NR48 2969 aaKnown RBP1.19□□□□□ -2.22
SNRPEP4-201ENST00000435815 DEFB131BA0A096LNP1 70 aa1.19□□□□□ -2.22
SNRPEP4-201ENST00000435815 I3L3M4 83 aa1.19□□□□□ -2.22
SNRPEP4-201ENST00000435815 J3QKU1 62 aa1.19□□□□□ -2.22
SNRPEP4-201ENST00000435815 COX6B1P14854 86 aa1.19□□□□□ -2.22
SNRPEP4-201ENST00000435815 OTOGLQ3ZCN5 2332 aa1.19□□□□□ -2.22
SNRPEP4-201ENST00000435815 TOMM5Q8N4H5 51 aa1.19□□□□□ -2.22
SNRPEP4-201ENST00000435815 NMES1Q9C002 83 aa1.19□□□□□ -2.22
SNRPEP4-201ENST00000435815 IQGAP1P46940 1657 aa1.19□□□□□ -2.22
SNRPEP4-201ENST00000435815 PRH1P02810 166 aa1.18□□□□□ -2.22
SNRPEP4-201ENST00000435815 CRIP1P50238 77 aa1.18□□□□□ -2.22
SNRPEP4-201ENST00000435815 MRPL34Q9BQ48 92 aaKnown RBP1.18□□□□□ -2.22
SNRPEP4-201ENST00000435815 CNFNQ9BYD5 112 aa1.18□□□□□ -2.22
SNRPEP4-201ENST00000435815 RP1L1Q8IWN7 2480 aaPredicted RBP1.18□□□□□ -2.22
SNRPEP4-201ENST00000435815 TRPM2O94759 1503 aa1.18□□□□□ -2.22
SNRPEP4-201ENST00000435815 DEPDC5O75140 1603 aa1.18□□□□□ -2.22
SNRPEP4-201ENST00000435815 CLTCL1P53675 1640 aa1.18□□□□□ -2.22
SNRPEP4-201ENST00000435815 COL6A6A6NMZ7 2263 aa1.17□□□□□ -2.22
SNRPEP4-201ENST00000435815 CNOT1A5YKK6 2376 aaKnown RBP1.17□□□□□ -2.22
SNRPEP4-201ENST00000435815 PLNP26678 52 aa1.17□□□□□ -2.22
SNRPEP4-201ENST00000435815 COX6A2Q02221 97 aa1.17□□□□□ -2.22
SNRPEP4-201ENST00000435815 ROS1P08922 2347 aa1.17□□□□□ -2.22
SNRPEP4-201ENST00000435815 PIEZO2Q9H5I5 2752 aa1.17□□□□□ -2.22
SNRPEP4-201ENST00000435815 A0A0D9SG42 100 aa1.16□□□□□ -2.22
SNRPEP4-201ENST00000435815 KRTAP12-3P60328 96 aa1.16□□□□□ -2.22
SNRPEP4-201ENST00000435815 KRTAP10-4P60372 401 aaPredicted RBP1.16□□□□□ -2.22
SNRPEP4-201ENST00000435815 PIGYQ3MUY2 71 aa1.16□□□□□ -2.22
SNRPEP4-201ENST00000435815 SPINK9Q5DT21 86 aa1.16□□□□□ -2.22
SNRPEP4-201ENST00000435815 GCC2Q8IWJ2 1684 aa1.16□□□□□ -2.22
SNRPEP4-201ENST00000435815 DDX60Q8IY21 1712 aaKnown RBP1.15□□□□□ -2.22
SNRPEP4-201ENST00000435815 SMIM27A0A1W2PRY6 76 aa1.15□□□□□ -2.23
SNRPEP4-201ENST00000435815 SERF2P84101 59 aa1.15□□□□□ -2.23
SNRPEP4-201ENST00000435815 Q6ZSA8 131 aa1.15□□□□□ -2.23
SNRPEP4-201ENST00000435815 USMG5Q96IX5 58 aa1.15□□□□□ -2.23
SNRPEP4-201ENST00000435815 MROH2BQ7Z745 1585 aa1.14□□□□□ -2.23
SNRPEP4-201ENST00000435815 MRPL33O75394 65 aaKnown RBP1.14□□□□□ -2.23
SNRPEP4-201ENST00000435815 PRB3Q04118 309 aaPredicted RBP1.14□□□□□ -2.23
SNRPEP4-201ENST00000435815 LELP1Q5T871 98 aa1.14□□□□□ -2.23
SNRPEP4-201ENST00000435815 PRO3102Q9H379 93 aa1.14□□□□□ -2.23
SNRPEP4-201ENST00000435815 ABRACLQ9P1F3 81 aa1.14□□□□□ -2.23
SNRPEP4-201ENST00000435815 PRO0255Q9UI72 69 aa1.14□□□□□ -2.23
SNRPEP4-201ENST00000435815 ATP7AQ04656 1500 aa1.14□□□□□ -2.23
SNRPEP4-201ENST00000435815 LINC01546A6NGU7 62 aa1.13□□□□□ -2.23
SNRPEP4-201ENST00000435815 LOC730098B7Z3J9 87 aa1.13□□□□□ -2.23
SNRPEP4-201ENST00000435815 H0YAA0 97 aa1.13□□□□□ -2.23
SNRPEP4-201ENST00000435815 CDKN2A-AS1Q9UH64 79 aa1.13□□□□□ -2.23
SNRPEP4-201ENST00000435815 ALMS1Q8TCU4 4167 aa1.13□□□□□ -2.23
SNRPEP4-201ENST00000435815 DOPEY2Q9Y3R5 2298 aa1.12□□□□□ -2.23
SNRPEP4-201ENST00000435815 NDUFA3O95167 84 aa1.12□□□□□ -2.23
SNRPEP4-201ENST00000435815 COX6B2Q6YFQ2 88 aa1.12□□□□□ -2.23
SNRPEP4-201ENST00000435815 Q8IZM0 81 aa1.12□□□□□ -2.23
SNRPEP4-201ENST00000435815 LMO7Q8WWI1 1683 aa1.12□□□□□ -2.23
SNRPEP4-201ENST00000435815 NFAT5O94916 1531 aa1.11□□□□□ -2.23
SNRPEP4-201ENST00000435815 PTPRZ1P23471 2315 aaPredicted RBP1.1□□□□□ -2.23
SNRPEP4-201ENST00000435815 PLCE1Q9P212 2302 aa1.1□□□□□ -2.23
SNRPEP4-201ENST00000435815 CCL22O00626 93 aa1.1□□□□□ -2.23
SNRPEP4-201ENST00000435815 SPRR1AP35321 89 aa1.1□□□□□ -2.23
SNRPEP4-201ENST00000435815 Q5VSD8 79 aa1.1□□□□□ -2.23
SNRPEP4-201ENST00000435815 FBN3Q75N90 2809 aa1.1□□□□□ -2.23
SNRPEP4-201ENST00000435815 REV3LO60673 3130 aa1.09□□□□□ -2.23
SNRPEP4-201ENST00000435815 LINC00158P58513 81 aa1.09□□□□□ -2.23
SNRPEP4-201ENST00000435815 USF3Q68DE3 2245 aa1.08□□□□□ -2.24
SNRPEP4-201ENST00000435815 LYNX1G3V0Z9 82 aa1.07□□□□□ -2.24
SNRPEP4-201ENST00000435815 H0YGX0 51 aa1.07□□□□□ -2.24
SNRPEP4-201ENST00000435815 H1FX-AS1Q4G0G2 97 aa1.07□□□□□ -2.24
SNRPEP4-201ENST00000435815 PTPRQQ9UMZ3 2332 aa1.06□□□□□ -2.24
SNRPEP4-201ENST00000435815 C2CD3Q4AC94 2353 aa1.06□□□□□ -2.24
SNRPEP4-201ENST00000435815 KRTAP21-3Q3LHN1 58 aa1.06□□□□□ -2.24
SNRPEP4-201ENST00000435815 SAMD9LQ8IVG5 1584 aa1.05□□□□□ -2.24
SNRPEP4-201ENST00000435815 SPRR1BP22528 89 aa1.05□□□□□ -2.24
SNRPEP4-201ENST00000435815 DEFB105AQ8NG35 78 aa1.05□□□□□ -2.24
SNRPEP4-201ENST00000435815 CACNA1HO95180 2353 aa1.05□□□□□ -2.24
SNRPEP4-201ENST00000435815 ZNF462Q96JM2 2506 aa1.04□□□□□ -2.24
SNRPEP4-201ENST00000435815 SPINK4O60575 86 aa1.04□□□□□ -2.24
SNRPEP4-201ENST00000435815 APLNQ9ULZ1 77 aa1.04□□□□□ -2.24
SNRPEP4-201ENST00000435815 TIMM8BQ9Y5J9 83 aaPredicted RBP1.04□□□□□ -2.24
SNRPEP4-201ENST00000435815 MEGF8Q7Z7M0 2845 aa1.03□□□□□ -2.24
SNRPEP4-201ENST00000435815 WFDC13Q8IUB5 93 aa1.02□□□□□ -2.25
SNRPEP4-201ENST00000435815 LINC00308Q8TCZ7 52 aa1.02□□□□□ -2.25
SNRPEP4-201ENST00000435815 TMEM167BQ9NRX6 74 aa1.01□□□□□ -2.25
SNRPEP4-201ENST00000435815 DUOX1Q9NRD9 1551 aa1□□□□□ -2.25
SNRPEP4-201ENST00000435815 KLK9Q2XQG4 91 aa1□□□□□ -2.25
SNRPEP4-201ENST00000435815 MINOS1Q5TGZ0 78 aa1□□□□□ -2.25
SNRPEP4-201ENST00000435815 SPTBN2O15020 2390 aa0.99□□□□□ -2.25
SNRPEP4-201ENST00000435815 DEFB130BP0DP73 79 aa0.99□□□□□ -2.25
SNRPEP4-201ENST00000435815 DEFB130AP0DP74 79 aa0.99□□□□□ -2.25
SNRPEP4-201ENST00000435815 IAPPP10997 89 aa0.99□□□□□ -2.25
SNRPEP4-201ENST00000435815 RPS27P42677 84 aaKnown RBP0.99□□□□□ -2.25
SNRPEP4-201ENST00000435815 RPS27LQ71UM5 84 aaKnown RBP0.99□□□□□ -2.25
SNRPEP4-201ENST00000435815 TTC28Q96AY4 2481 aa0.99□□□□□ -2.25
SNRPEP4-201ENST00000435815 TFF3Q07654 80 aa0.98□□□□□ -2.25
SNRPEP4-201ENST00000435815 C6orf48Q9UBA6 75 aa0.98□□□□□ -2.25
SNRPEP4-201ENST00000435815 HELZ2Q9BYK8 2649 aaKnown RBP0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms