RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 XAGE1AQ9HD64 81 aa10.35□□□□□ -0.75
TVP23C-203ENST00000428082 NDUFC2-KCTD14E9PQ53 114 aa10.34□□□□□ -0.75
TVP23C-203ENST00000428082 HIGD2BQ4VC39 106 aa10.34□□□□□ -0.75
TVP23C-203ENST00000428082 DNAH1Q9P2D7 4330 aa10.33□□□□□ -0.76
TVP23C-203ENST00000428082 VPREB1P12018 145 aa10.33□□□□□ -0.76
TVP23C-203ENST00000428082 COX7CP15954 63 aa10.33□□□□□ -0.76
TVP23C-203ENST00000428082 DSCR8Q96T75 97 aa10.33□□□□□ -0.76
TVP23C-203ENST00000428082 C15orf56Q8N910 161 aa10.32□□□□□ -0.76
TVP23C-203ENST00000428082 VPS13DQ5THJ4 4388 aa10.31□□□□□ -0.76
TVP23C-203ENST00000428082 ELOF1P60002 83 aaKnown RBP10.31□□□□□ -0.76
TVP23C-203ENST00000428082 C9orf153Q5TBE3 101 aa10.31□□□□□ -0.76
TVP23C-203ENST00000428082 Q6ZQT0 140 aa10.31□□□□□ -0.76
TVP23C-203ENST00000428082 Q6ZQY7 126 aa10.31□□□□□ -0.76
TVP23C-203ENST00000428082 Q6ZRU5 148 aa10.31□□□□□ -0.76
TVP23C-203ENST00000428082 IGKV2D-24A0A075B6R9 120 aa10.29□□□□□ -0.76
TVP23C-203ENST00000428082 KRTAP1-5Q9BYS1 174 aa10.28□□□□□ -0.76
TVP23C-203ENST00000428082 SYCNQ0VAF6 134 aa10.27□□□□□ -0.76
TVP23C-203ENST00000428082 LY6G6CO95867 125 aa10.27□□□□□ -0.77
TVP23C-203ENST00000428082 LINC00476Q8WZB0 136 aa10.27□□□□□ -0.77
TVP23C-203ENST00000428082 USP17L23D6RBM5 183 aa10.25□□□□□ -0.77
TVP23C-203ENST00000428082 CRYGAP11844 174 aa10.25□□□□□ -0.77
TVP23C-203ENST00000428082 SERP2Q8N6R1 65 aa10.25□□□□□ -0.77
TVP23C-203ENST00000428082 NBDYA0A0U1RRE5 68 aa10.24□□□□□ -0.77
TVP23C-203ENST00000428082 ALMS1Q8TCU4 4167 aa10.24□□□□□ -0.77
TVP23C-203ENST00000428082 KMT2AQ03164 3969 aa10.23□□□□□ -0.77
TVP23C-203ENST00000428082 LINC00528Q8N1L1 170 aa10.23□□□□□ -0.77
TVP23C-203ENST00000428082 RMI2Q96E14 147 aa10.23□□□□□ -0.77
TVP23C-203ENST00000428082 A0A087WVE0 104 aa10.22□□□□□ -0.77
TVP23C-203ENST00000428082 TLX1NBP0CAT3 122 aa10.22□□□□□ -0.77
TVP23C-203ENST00000428082 Q6ZRP5 223 aa10.22□□□□□ -0.77
TVP23C-203ENST00000428082 NKAPP1Q8N9T2 125 aa10.22□□□□□ -0.77
TVP23C-203ENST00000428082 TRBV7-4A0A0J9YYF1 115 aa10.21□□□□□ -0.77
TVP23C-203ENST00000428082 M0R2N4 97 aa10.21□□□□□ -0.77
TVP23C-203ENST00000428082 PLA2G2DQ9UNK4 145 aa10.21□□□□□ -0.77
TVP23C-203ENST00000428082 BCE1O60756 84 aa10.2□□□□□ -0.78
TVP23C-203ENST00000428082 CXCL6P80162 114 aa10.19□□□□□ -0.78
TVP23C-203ENST00000428082 KCNQ1DNQ9H478 68 aa10.19□□□□□ -0.78
TVP23C-203ENST00000428082 Q6ZR54 194 aa10.17□□□□□ -0.78
TVP23C-203ENST00000428082 Q6ZVQ6 151 aa10.17□□□□□ -0.78
TVP23C-203ENST00000428082 LINC01547P58512 204 aaPredicted RBP10.17□□□□□ -0.78
TVP23C-203ENST00000428082 DNAH6Q9C0G6 4158 aa10.15□□□□□ -0.78
TVP23C-203ENST00000428082 FAM19A1Q7Z5A9 133 aa10.15□□□□□ -0.78
TVP23C-203ENST00000428082 IGLV5-37A0A075B6J1 123 aa10.15□□□□□ -0.79
TVP23C-203ENST00000428082 HAMPP81172 84 aa10.15□□□□□ -0.79
TVP23C-203ENST00000428082 SMIM20Q8N5G0 67 aa10.15□□□□□ -0.79
TVP23C-203ENST00000428082 DNAH10Q8IVF4 4471 aa10.15□□□□□ -0.79
TVP23C-203ENST00000428082 C7orf33Q8WU49 177 aa10.13□□□□□ -0.79
TVP23C-203ENST00000428082 DHRS4-AS1Q9P1J3 65 aa10.13□□□□□ -0.79
TVP23C-203ENST00000428082 HYDINQ4G0P3 5121 aa10.13□□□□□ -0.79
TVP23C-203ENST00000428082 PRYO14603 147 aa10.13□□□□□ -0.79
TVP23C-203ENST00000428082 LCE6AA0A183 80 aa10.12□□□□□ -0.79
TVP23C-203ENST00000428082 SACSQ9NZJ4 4579 aa10.11□□□□□ -0.79
TVP23C-203ENST00000428082 SERTAD4-AS1Q5TG53 156 aa10.11□□□□□ -0.79
TVP23C-203ENST00000428082 Q6ZRN7 208 aaPredicted RBP10.11□□□□□ -0.79
TVP23C-203ENST00000428082 TMEM258P61165 79 aa10.1□□□□□ -0.79
TVP23C-203ENST00000428082 PSCAO43653 123 aa10.09□□□□□ -0.79
TVP23C-203ENST00000428082 DNAH2Q9P225 4427 aa10.09□□□□□ -0.79
TVP23C-203ENST00000428082 A0A1B0GW54 56 aa10.09□□□□□ -0.79
TVP23C-203ENST00000428082 C1orf134Q5TEV5 83 aa10.07□□□□□ -0.8
TVP23C-203ENST00000428082 IGLV1-50A0A075B6I6 118 aa10.07□□□□□ -0.8
TVP23C-203ENST00000428082 TRAV7A0A075B6U4 112 aa10.07□□□□□ -0.8
TVP23C-203ENST00000428082 LOC107984640A0A0U1RRK4 108 aa10.07□□□□□ -0.8
TVP23C-203ENST00000428082 Q6ZRX8 168 aa10.07□□□□□ -0.8
TVP23C-203ENST00000428082 ETDCA0A1B0GVM5 59 aa10.06□□□□□ -0.8
TVP23C-203ENST00000428082 SPRR1AP35321 89 aa10.06□□□□□ -0.8
TVP23C-203ENST00000428082 KMT2CQ8NEZ4 4911 aaKnown RBP10.04□□□□□ -0.8
TVP23C-203ENST00000428082 IGLV5-48A0A075B6I7 105 aa10.04□□□□□ -0.8
TVP23C-203ENST00000428082 RPS28P62857 69 aaKnown RBP10.04□□□□□ -0.8
TVP23C-203ENST00000428082 KRTAP4-16G5E9R7 235 aaPredicted RBP10.03□□□□□ -0.8
TVP23C-203ENST00000428082 Q8N377 158 aa10.03□□□□□ -0.8
TVP23C-203ENST00000428082 LRCOL1A6NCL2 159 aa10.03□□□□□ -0.8
TVP23C-203ENST00000428082 J3KT08 172 aa10.03□□□□□ -0.8
TVP23C-203ENST00000428082 NREPQ16612 68 aa10.02□□□□□ -0.81
TVP23C-203ENST00000428082 MRPL55Q7Z7F7 128 aaKnown RBP10.02□□□□□ -0.81
TVP23C-203ENST00000428082 DEFB105AQ8NG35 78 aa10.01□□□□□ -0.81
TVP23C-203ENST00000428082 RTL8CO15255 209 aa10.01□□□□□ -0.81
TVP23C-203ENST00000428082 FRAS1Q86XX4 4008 aa10.01□□□□□ -0.81
TVP23C-203ENST00000428082 RPL37AP8A6NKH3 93 aa10□□□□□ -0.81
TVP23C-203ENST00000428082 FUSP35637 526 aaKnown RBP eCLIP10□□□□□ -0.81
TVP23C-203ENST00000428082 FAM168BA1KXE4 195 aa9.99□□□□□ -0.81
TVP23C-203ENST00000428082 DNAH17Q9UFH2 4485 aa9.98□□□□□ -0.81
TVP23C-203ENST00000428082 RYR2Q92736 4967 aa9.98□□□□□ -0.81
TVP23C-203ENST00000428082 A0A087WTM6 91 aa9.97□□□□□ -0.81
TVP23C-203ENST00000428082 Q9BRP9 147 aa9.97□□□□□ -0.81
TVP23C-203ENST00000428082 CYSTM1Q9H1C7 97 aa9.97□□□□□ -0.81
TVP23C-203ENST00000428082 TNP2Q05952 138 aa9.97□□□□□ -0.81
TVP23C-203ENST00000428082 FAM19A5Q7Z5A7 132 aaPredicted RBP9.97□□□□□ -0.81
TVP23C-203ENST00000428082 C20orf197Q8N268 126 aa9.97□□□□□ -0.81
TVP23C-203ENST00000428082 REG3GQ6UW15 175 aa9.96□□□□□ -0.81
TVP23C-203ENST00000428082 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.95□□□□□ -0.82
TVP23C-203ENST00000428082 BPY2O14599 106 aa9.95□□□□□ -0.82
TVP23C-203ENST00000428082 C14orf177Q52M58 125 aa9.95□□□□□ -0.82
TVP23C-203ENST00000428082 SCXQ7RTU7 201 aa9.95□□□□□ -0.82
TVP23C-203ENST00000428082 KRTAP7-1Q8IUC3 87 aa9.95□□□□□ -0.82
TVP23C-203ENST00000428082 CNBPP62633 177 aaKnown RBP9.94□□□□□ -0.82
TVP23C-203ENST00000428082 UBE2BP63146 152 aa9.94□□□□□ -0.82
TVP23C-203ENST00000428082 KLKP1Q107X0 134 aa9.94□□□□□ -0.82
TVP23C-203ENST00000428082 C1orf137Q5JT78 98 aa9.94□□□□□ -0.82
TVP23C-203ENST00000428082 C16orf90A8MZG2 172 aa9.93□□□□□ -0.82
TVP23C-203ENST00000428082 SVIPQ8NHG7 77 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms