RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 MIR22HGQ0VDD5 57 aa3.57□□□□□ -1.84
VTI1BP4-201ENST00000427516 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
VTI1BP4-201ENST00000427516 REG3GQ6UW15 175 aa3.57□□□□□ -1.84
VTI1BP4-201ENST00000427516 IGFL1Q6UW32 110 aa3.57□□□□□ -1.84
VTI1BP4-201ENST00000427516 IGKV2-24A0A0C4DH68 120 aa3.56□□□□□ -1.84
VTI1BP4-201ENST00000427516 KRTAP4-16G5E9R7 235 aaPredicted RBP3.56□□□□□ -1.84
VTI1BP4-201ENST00000427516 LAMA3Q16787 3333 aa3.56□□□□□ -1.84
VTI1BP4-201ENST00000427516 CEP290O15078 2479 aa3.55□□□□□ -1.84
VTI1BP4-201ENST00000427516 A0A096LPF7 62 aa3.55□□□□□ -1.84
VTI1BP4-201ENST00000427516 HRES1P13985 223 aa3.55□□□□□ -1.84
VTI1BP4-201ENST00000427516 REV3LO60673 3130 aa3.55□□□□□ -1.84
VTI1BP4-201ENST00000427516 TRIOO75962 3097 aa3.54□□□□□ -1.84
VTI1BP4-201ENST00000427516 IGHV6-1A0A0B4J1U7 121 aa3.54□□□□□ -1.84
VTI1BP4-201ENST00000427516 MMP24-AS1A0A0U1RRL7 71 aa3.54□□□□□ -1.84
VTI1BP4-201ENST00000427516 PCOTHQ58A44 107 aa3.54□□□□□ -1.84
VTI1BP4-201ENST00000427516 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
VTI1BP4-201ENST00000427516 RP1L1Q8IWN7 2480 aaPredicted RBP3.54□□□□□ -1.84
VTI1BP4-201ENST00000427516 CFAP54Q96N23 3096 aa3.54□□□□□ -1.84
VTI1BP4-201ENST00000427516 VCANP13611 3396 aa3.54□□□□□ -1.84
VTI1BP4-201ENST00000427516 A0A1W2PPR1 153 aa3.53□□□□□ -1.84
VTI1BP4-201ENST00000427516 SPRR1BP22528 89 aa3.53□□□□□ -1.84
VTI1BP4-201ENST00000427516 LINC00472Q9H8W2 130 aa3.53□□□□□ -1.84
VTI1BP4-201ENST00000427516 ZNF706Q9Y5V0 76 aaPredicted RBP3.53□□□□□ -1.84
VTI1BP4-201ENST00000427516 FRYLO94915 3013 aa3.52□□□□□ -1.85
VTI1BP4-201ENST00000427516 EP300Q09472 2414 aaPredicted RBP3.52□□□□□ -1.85
VTI1BP4-201ENST00000427516 DEFB116Q30KQ4 102 aa3.52□□□□□ -1.85
VTI1BP4-201ENST00000427516 C15orf56Q8N910 161 aa3.52□□□□□ -1.85
VTI1BP4-201ENST00000427516 GPR179Q6PRD1 2367 aa3.52□□□□□ -1.85
VTI1BP4-201ENST00000427516 WNK1Q9H4A3 2382 aa3.51□□□□□ -1.85
VTI1BP4-201ENST00000427516 KALRNO60229 2985 aa3.51□□□□□ -1.85
VTI1BP4-201ENST00000427516 LINC01556Q5JQF7 62 aa3.51□□□□□ -1.85
VTI1BP4-201ENST00000427516 USP34Q70CQ2 3546 aa3.5□□□□□ -1.85
VTI1BP4-201ENST00000427516 SPTBN5Q9NRC6 3674 aaKnown RBP3.5□□□□□ -1.85
VTI1BP4-201ENST00000427516 CSAG1Q6PB30 78 aa3.5□□□□□ -1.85
VTI1BP4-201ENST00000427516 DMAC1Q96GE9 116 aa3.5□□□□□ -1.85
VTI1BP4-201ENST00000427516 MRPL34Q9BQ48 92 aaKnown RBP3.5□□□□□ -1.85
VTI1BP4-201ENST00000427516 PRO3102Q9H379 93 aa3.5□□□□□ -1.85
VTI1BP4-201ENST00000427516 C8orf17Q9NRJ1 99 aa3.5□□□□□ -1.85
VTI1BP4-201ENST00000427516 PRUNE2Q8WUY3 3088 aa3.5□□□□□ -1.85
VTI1BP4-201ENST00000427516 DSPP15924 2871 aaKnown RBP3.49□□□□□ -1.85
VTI1BP4-201ENST00000427516 CDH23Q9H251 3354 aa3.49□□□□□ -1.85
VTI1BP4-201ENST00000427516 K7ERS5 55 aa3.49□□□□□ -1.85
VTI1BP4-201ENST00000427516 C1orf134Q5TEV5 83 aa3.49□□□□□ -1.85
VTI1BP4-201ENST00000427516 FREM2Q5SZK8 3169 aa3.49□□□□□ -1.85
VTI1BP4-201ENST00000427516 COL6A6A6NMZ7 2263 aa3.49□□□□□ -1.85
VTI1BP4-201ENST00000427516 CNOT1A5YKK6 2376 aaKnown RBP3.48□□□□□ -1.85
VTI1BP4-201ENST00000427516 A0A1B0GVX0 72 aa3.48□□□□□ -1.85
VTI1BP4-201ENST00000427516 ROMO1P60602 79 aa3.48□□□□□ -1.85
VTI1BP4-201ENST00000427516 APC2O95996 2303 aa3.48□□□□□ -1.85
VTI1BP4-201ENST00000427516 CFAP47Q6ZTR5 3102 aa3.48□□□□□ -1.85
VTI1BP4-201ENST00000427516 TRIOBPQ9H2D6 2365 aa3.47□□□□□ -1.85
VTI1BP4-201ENST00000427516 PRRC2CQ9Y520 2896 aaKnown RBP3.47□□□□□ -1.85
VTI1BP4-201ENST00000427516 ZFHX3Q15911 3703 aa3.47□□□□□ -1.85
VTI1BP4-201ENST00000427516 HTN3P15516 51 aa3.47□□□□□ -1.85
VTI1BP4-201ENST00000427516 KRTAP26-1Q6PEX3 210 aa3.47□□□□□ -1.85
VTI1BP4-201ENST00000427516 CR1P17927 2039 aa3.46□□□□□ -1.86
VTI1BP4-201ENST00000427516 CACNA1HO95180 2353 aa3.46□□□□□ -1.86
VTI1BP4-201ENST00000427516 MGAQ8IWI9 3026 aa3.46□□□□□ -1.86
VTI1BP4-201ENST00000427516 SORL1Q92673 2214 aa3.46□□□□□ -1.86
VTI1BP4-201ENST00000427516 WDFY4Q6ZS81 3184 aa3.45□□□□□ -1.86
VTI1BP4-201ENST00000427516 KRTAP25-1Q3LHN0 102 aa3.45□□□□□ -1.86
VTI1BP4-201ENST00000427516 C14orf177Q52M58 125 aa3.45□□□□□ -1.86
VTI1BP4-201ENST00000427516 PCNX1Q96RV3 2341 aa3.45□□□□□ -1.86
VTI1BP4-201ENST00000427516 WDFY3Q8IZQ1 3526 aa3.45□□□□□ -1.86
VTI1BP4-201ENST00000427516 DEFB135Q30KP9 77 aa3.44□□□□□ -1.86
VTI1BP4-201ENST00000427516 ADM2Q7Z4H4 148 aa3.44□□□□□ -1.86
VTI1BP4-201ENST00000427516 DEFB123Q8N688 67 aa3.44□□□□□ -1.86
VTI1BP4-201ENST00000427516 INAFM1C9JVW0 142 aa3.43□□□□□ -1.86
VTI1BP4-201ENST00000427516 DNAH10OSP0CZ25 163 aa3.43□□□□□ -1.86
VTI1BP4-201ENST00000427516 ABCA2Q9BZC7 2435 aa3.42□□□□□ -1.86
VTI1BP4-201ENST00000427516 SPEGQ15772 3267 aa3.42□□□□□ -1.86
VTI1BP4-201ENST00000427516 KRTAP23-1A1A580 65 aa3.42□□□□□ -1.86
VTI1BP4-201ENST00000427516 ZNF861PO60384 105 aa3.42□□□□□ -1.86
VTI1BP4-201ENST00000427516 IGLV7-43P04211 117 aa3.42□□□□□ -1.86
VTI1BP4-201ENST00000427516 ZDBF2Q9HCK1 2354 aa3.42□□□□□ -1.86
VTI1BP4-201ENST00000427516 DCHS1Q96JQ0 3298 aa3.42□□□□□ -1.86
VTI1BP4-201ENST00000427516 CREBBPQ92793 2442 aa3.42□□□□□ -1.86
VTI1BP4-201ENST00000427516 PTPRZ1P23471 2315 aaPredicted RBP3.42□□□□□ -1.86
VTI1BP4-201ENST00000427516 DMXL2Q8TDJ6 3036 aa3.41□□□□□ -1.86
VTI1BP4-201ENST00000427516 TACC2O95359 2948 aa3.41□□□□□ -1.86
VTI1BP4-201ENST00000427516 LY6G6CO95867 125 aa3.4□□□□□ -1.87
VTI1BP4-201ENST00000427516 AKAP6Q13023 2319 aa3.4□□□□□ -1.87
VTI1BP4-201ENST00000427516 AKAP13Q12802 2813 aa3.4□□□□□ -1.87
VTI1BP4-201ENST00000427516 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.39□□□□□ -1.87
VTI1BP4-201ENST00000427516 FAM168BA1KXE4 195 aa3.39□□□□□ -1.87
VTI1BP4-201ENST00000427516 PRLHP81277 87 aa3.39□□□□□ -1.87
VTI1BP4-201ENST00000427516 CELSR3Q9NYQ7 3312 aa3.39□□□□□ -1.87
VTI1BP4-201ENST00000427516 DEFB113Q30KQ7 82 aa3.38□□□□□ -1.87
VTI1BP4-201ENST00000427516 KRTAP15-1Q3LI76 137 aa3.38□□□□□ -1.87
VTI1BP4-201ENST00000427516 KRTAP9-8Q9BYQ0 159 aa3.38□□□□□ -1.87
VTI1BP4-201ENST00000427516 ANAPC11Q9NYG5 84 aa3.38□□□□□ -1.87
VTI1BP4-201ENST00000427516 NCOR1O75376 2440 aa3.37□□□□□ -1.87
VTI1BP4-201ENST00000427516 DEFB4AO15263 64 aa3.37□□□□□ -1.87
VTI1BP4-201ENST00000427516 Q96NJ1 140 aa3.37□□□□□ -1.87
VTI1BP4-201ENST00000427516 MAP1AP78559 2803 aaPredicted RBP3.36□□□□□ -1.87
VTI1BP4-201ENST00000427516 A8MUU9 505 aa3.36□□□□□ -1.87
VTI1BP4-201ENST00000427516 LINC00483Q53H64 154 aa3.36□□□□□ -1.87
VTI1BP4-201ENST00000427516 ADGRG4Q8IZF6 3080 aa3.35□□□□□ -1.87
VTI1BP4-201ENST00000427516 MYO15AQ9UKN7 3530 aa3.35□□□□□ -1.87
VTI1BP4-201ENST00000427516 ACACAQ13085 2346 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms