RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 PPDPFLQ8WWR9 84 aa9.67□□□□□ -0.86
ACTB-204ENST00000425660 SNCGO76070 127 aa9.66□□□□□ -0.86
ACTB-204ENST00000425660 LINC00474Q9P2X8 69 aa9.66□□□□□ -0.86
ACTB-204ENST00000425660 HYDINQ4G0P3 5121 aa9.66□□□□□ -0.86
ACTB-204ENST00000425660 A0A1W2PNN7 141 aa9.65□□□□□ -0.86
ACTB-204ENST00000425660 hADV29S1A0JD25 119 aa9.65□□□□□ -0.86
ACTB-204ENST00000425660 COX7BP24311 80 aa9.65□□□□□ -0.86
ACTB-204ENST00000425660 SPRR1AP35321 89 aa9.65□□□□□ -0.86
ACTB-204ENST00000425660 PRYO14603 147 aa9.64□□□□□ -0.87
ACTB-204ENST00000425660 LINC00528Q8N1L1 170 aa9.64□□□□□ -0.87
ACTB-204ENST00000425660 ORMDL1Q9P0S3 153 aa9.64□□□□□ -0.87
ACTB-204ENST00000425660 TEX49A0A1B0GTD5 131 aa9.63□□□□□ -0.87
ACTB-204ENST00000425660 KRTAP4-16G5E9R7 235 aaPredicted RBP9.63□□□□□ -0.87
ACTB-204ENST00000425660 J3QR89 54 aa9.63□□□□□ -0.87
ACTB-204ENST00000425660 HECTD4Q9Y4D8 3996 aa9.63□□□□□ -0.87
ACTB-204ENST00000425660 RPL37AP8A6NKH3 93 aa9.63□□□□□ -0.87
ACTB-204ENST00000425660 CHTF8P0CG12 524 aa9.63□□□□□ -0.87
ACTB-204ENST00000425660 RTL8CO15255 209 aa9.61□□□□□ -0.87
ACTB-204ENST00000425660 KMT2CQ8NEZ4 4911 aaKnown RBP9.61□□□□□ -0.87
ACTB-204ENST00000425660 FRAS1Q86XX4 4008 aa9.61□□□□□ -0.87
ACTB-204ENST00000425660 EPM2AB3EWF7 344 aa9.6□□□□□ -0.87
ACTB-204ENST00000425660 SACSQ9NZJ4 4579 aa9.6□□□□□ -0.87
ACTB-204ENST00000425660 PANO1I0J062 215 aa9.59□□□□□ -0.87
ACTB-204ENST00000425660 TMEM256-PLSCR3K7ERE1 68 aa9.59□□□□□ -0.87
ACTB-204ENST00000425660 TNP2Q05952 138 aa9.59□□□□□ -0.87
ACTB-204ENST00000425660 SPACA4Q8TDM5 124 aa9.59□□□□□ -0.87
ACTB-204ENST00000425660 Q6ZRX8 168 aa9.59□□□□□ -0.88
ACTB-204ENST00000425660 INAFM2P0DMQ5 153 aa9.58□□□□□ -0.88
ACTB-204ENST00000425660 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.58□□□□□ -0.88
ACTB-204ENST00000425660 Q6ZQY7 126 aa9.58□□□□□ -0.88
ACTB-204ENST00000425660 OBSCN-AS1Q96MR7 158 aa9.58□□□□□ -0.88
ACTB-204ENST00000425660 B5MCH6 92 aa9.57□□□□□ -0.88
ACTB-204ENST00000425660 H3BQ85 93 aa9.56□□□□□ -0.88
ACTB-204ENST00000425660 REG3GQ6UW15 175 aa9.56□□□□□ -0.88
ACTB-204ENST00000425660 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.56□□□□□ -0.88
ACTB-204ENST00000425660 IGLV5-52A0A0A0MRZ9 124 aa9.56□□□□□ -0.88
ACTB-204ENST00000425660 FAT2Q9NYQ8 4349 aa9.56□□□□□ -0.88
ACTB-204ENST00000425660 DNAH11Q96DT5 4516 aa9.55□□□□□ -0.88
ACTB-204ENST00000425660 ETDCA0A1B0GVM5 59 aa9.54□□□□□ -0.88
ACTB-204ENST00000425660 FUSP35637 526 aaKnown RBP eCLIP9.54□□□□□ -0.886e-7■■■□□ 15.9
ACTB-204ENST00000425660 DHRS4-AS1Q9P1J3 65 aa9.54□□□□□ -0.88
ACTB-204ENST00000425660 GHRHP01286 108 aa9.54□□□□□ -0.88
ACTB-204ENST00000425660 PHF5AQ7RTV0 110 aaKnown RBP9.54□□□□□ -0.88
ACTB-204ENST00000425660 LCE6AA0A183 80 aa9.53□□□□□ -0.88
ACTB-204ENST00000425660 Q9BRP9 147 aa9.53□□□□□ -0.88
ACTB-204ENST00000425660 JMJD7-PLA2G4BH0Y9G9 81 aa9.51□□□□□ -0.89
ACTB-204ENST00000425660 KRTAP11-1Q8IUC1 163 aa9.51□□□□□ -0.89
ACTB-204ENST00000425660 RYR2Q92736 4967 aa9.51□□□□□ -0.89
ACTB-204ENST00000425660 DNAH5Q8TE73 4624 aa9.51□□□□□ -0.89
ACTB-204ENST00000425660 FAM240AA0A1B0GVK7 77 aa9.49□□□□□ -0.89
ACTB-204ENST00000425660 KRTAP10-2P60368 255 aa9.49□□□□□ -0.89
ACTB-204ENST00000425660 UBE2BP63146 152 aa9.49□□□□□ -0.89
ACTB-204ENST00000425660 DPH3Q96FX2 82 aa9.49□□□□□ -0.89
ACTB-204ENST00000425660 VPS25Q9BRG1 176 aa9.49□□□□□ -0.89
ACTB-204ENST00000425660 PLAC8Q9NZF1 115 aa9.49□□□□□ -0.89
ACTB-204ENST00000425660 H0Y9J4 135 aa9.47□□□□□ -0.89
ACTB-204ENST00000425660 PKD1P98161 4303 aa9.47□□□□□ -0.89
ACTB-204ENST00000425660 SMCR5Q8TEV8 140 aa9.47□□□□□ -0.89
ACTB-204ENST00000425660 C14orf132Q9NPU4 83 aa9.47□□□□□ -0.89
ACTB-204ENST00000425660 LINC01547P58512 204 aaPredicted RBP9.46□□□□□ -0.9
ACTB-204ENST00000425660 CDIP1Q9H305 208 aa9.46□□□□□ -0.9
ACTB-204ENST00000425660 RYR3Q15413 4870 aa9.46□□□□□ -0.9
ACTB-204ENST00000425660 DNAH8Q96JB1 4490 aa9.46□□□□□ -0.9
ACTB-204ENST00000425660 IGLV5-48A0A075B6I7 105 aa9.45□□□□□ -0.9
ACTB-204ENST00000425660 FAM19A1Q7Z5A9 133 aa9.45□□□□□ -0.9
ACTB-204ENST00000425660 ERC2-IT1O76042 136 aa9.44□□□□□ -0.9
ACTB-204ENST00000425660 ACYP1P07311 99 aa9.44□□□□□ -0.9
ACTB-204ENST00000425660 LAMTOR3Q9UHA4 124 aa9.44□□□□□ -0.9
ACTB-204ENST00000425660 PRLHP81277 87 aa9.43□□□□□ -0.9
ACTB-204ENST00000425660 RBM3P98179 157 aaKnown RBP9.43□□□□□ -0.9
ACTB-204ENST00000425660 Q8N377 158 aa9.43□□□□□ -0.9
ACTB-204ENST00000425660 BCE1O60756 84 aa9.42□□□□□ -0.9
ACTB-204ENST00000425660 NDUFV3P56181 108 aaKnown RBP9.42□□□□□ -0.9
ACTB-204ENST00000425660 Q6ZSA8 131 aa9.41□□□□□ -0.9
ACTB-204ENST00000425660 KRTAP13-1Q8IUC0 172 aa9.41□□□□□ -0.9
ACTB-204ENST00000425660 LOC110117498A0A087WWA1 95 aa9.4□□□□□ -0.9
ACTB-204ENST00000425660 A0A1B0GV72 72 aa9.4□□□□□ -0.9
ACTB-204ENST00000425660 ST20-AS1Q8NBB2 130 aa9.4□□□□□ -0.9
ACTB-204ENST00000425660 CCKP06307 115 aa9.4□□□□□ -0.91
ACTB-204ENST00000425660 GAGE2AQ6NT46 116 aa9.39□□□□□ -0.91
ACTB-204ENST00000425660 LINC00336Q6ZUF6 198 aa9.39□□□□□ -0.91
ACTB-204ENST00000425660 TRBV7-4A0A0J9YYF1 115 aa9.38□□□□□ -0.91
ACTB-204ENST00000425660 Q6ZQT0 140 aa9.38□□□□□ -0.91
ACTB-204ENST00000425660 DEFB105AQ8NG35 78 aa9.38□□□□□ -0.91
ACTB-204ENST00000425660 FAM30AQ9NZY2 134 aa9.38□□□□□ -0.91
ACTB-204ENST00000425660 PDE6GP18545 87 aa9.38□□□□□ -0.91
ACTB-204ENST00000425660 DSCR8Q96T75 97 aa9.38□□□□□ -0.91
ACTB-204ENST00000425660 HIGD2AQ9BW72 106 aa9.38□□□□□ -0.91
ACTB-204ENST00000425660 UBE2AP49459 152 aa9.37□□□□□ -0.91
ACTB-204ENST00000425660 KRTAP10-1P60331 282 aa9.36□□□□□ -0.91
ACTB-204ENST00000425660 CIRBP-AS1Q8TBR5 109 aa9.35□□□□□ -0.91
ACTB-204ENST00000425660 PSORS1C2Q9UIG4 136 aa9.35□□□□□ -0.91
ACTB-204ENST00000425660 XGP55808 180 aa9.35□□□□□ -0.91
ACTB-204ENST00000425660 SIGMAR1Q99720 223 aa9.33□□□□□ -0.92
ACTB-204ENST00000425660 PKHD1P08F94 4074 aa9.33□□□□□ -0.92
ACTB-204ENST00000425660 C21orf62-AS1Q17RA5 79 aa9.33□□□□□ -0.92
ACTB-204ENST00000425660 SMIM29Q86T20 159 aa9.33□□□□□ -0.92
ACTB-204ENST00000425660 C3orf22Q8N5N4 141 aa9.33□□□□□ -0.92
ACTB-204ENST00000425660 SRRM2Q9UQ35 2752 aaKnown RBP9.32□□□□□ -0.92
ACTB-204ENST00000425660 SPRR1BP22528 89 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms