RNA–Protein interactions for RNA: ENST00000421750.1

TRAPPC2P4-201, Transcript of trafficking protein particle complex 2 pseudogene 4, humanhuman

BASIC

Gene TRAPPC2P4, Length 331 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2P4-201ENST00000421750 DDX60LQ5H9U9 1706 aaKnown RBP1.19□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 AGLP35573 1532 aa1.19□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 NDUFA3O95167 84 aa1.18□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 COX6B1P14854 86 aa1.18□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 KRTAP10-4P60372 401 aaPredicted RBP1.18□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 COX6B2Q6YFQ2 88 aa1.18□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 ZDBF2Q9HCK1 2354 aa1.17□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 CDKN2A-AS1Q9UH64 79 aa1.17□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 NRXN3Q9Y4C0 1643 aa1.17□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 TJP1Q07157 1748 aa1.17□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 IQGAP2Q13576 1575 aa1.17□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 HIVEP2P31629 2446 aa1.16□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 KRTAP21-3Q3LHN1 58 aa1.16□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 LELP1Q5T871 98 aa1.16□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 APLNQ9ULZ1 77 aa1.16□□□□□ -2.22
TRAPPC2P4-201ENST00000421750 SPRR1AP35321 89 aa1.15□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 Q5VSD8 79 aa1.15□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 PRO3102Q9H379 93 aa1.15□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 ABRACLQ9P1F3 81 aa1.15□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 KNTC1P50748 2209 aa1.13□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 LINC00158P58513 81 aa1.13□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 PRB3Q04118 309 aaPredicted RBP1.13□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 H1FX-AS1Q4G0G2 97 aa1.13□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 DEFB105AQ8NG35 78 aa1.13□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 KIAA0586Q9BVV6 1533 aa1.13□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 FAM208BQ5VWN6 2430 aa1.13□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 SMIM27A0A1W2PRY6 76 aa1.12□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 LOC730098B7Z3J9 87 aa1.12□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 H0YAA0 97 aa1.12□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 SPRR1BP22528 89 aa1.12□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 CRCT1Q9UGL9 99 aa1.12□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 TIMM8BQ9Y5J9 83 aaPredicted RBP1.12□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 RP1L1Q8IWN7 2480 aaPredicted RBP1.12□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 FAM208AQ9UK61 1670 aaKnown RBP1.11□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 H0YGX0 51 aa1.11□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 KRTAP4-1Q9BYQ7 146 aa1.11□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 ANKRD36CQ5JPF3 1778 aa1.11□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 SORL1Q92673 2214 aa1.11□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 WFDC13Q8IUB5 93 aa1.1□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 CACNA1EQ15878 2313 aa1.1□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 KLK9Q2XQG4 91 aa1.09□□□□□ -2.23
TRAPPC2P4-201ENST00000421750 NAV3Q8IVL0 2385 aa1.08□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 LYNX1G3V0Z9 82 aa1.08□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 MINOS1Q5TGZ0 78 aa1.08□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 C4AP0C0L4 1744 aa1.08□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 C4BP0C0L5 1744 aa1.08□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 TOGARAM1Q9Y4F4 1720 aa1.08□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 DEPDC5O75140 1603 aa1.07□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 ASH1LQ9NR48 2969 aaKnown RBP1.07□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 PIEZO2Q9H5I5 2752 aa1.07□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 URB1O60287 2271 aaKnown RBP1.07□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 TMEM167BQ9NRX6 74 aa1.07□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 ROS1P08922 2347 aa1.07□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 GOLGA4Q13439 2230 aaKnown RBP1.06□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 LINC01546A6NGU7 62 aa1.06□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 SPINK4O60575 86 aa1.06□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 IAPPP10997 89 aa1.06□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 LINC00308Q8TCZ7 52 aa1.06□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 COL6A6A6NMZ7 2263 aa1.05□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.05□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 C6orf48Q9UBA6 75 aa1.05□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 TNCP24821 2201 aa1.05□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 OTOGLQ3ZCN5 2332 aa1.04□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 AHCTF1Q8WYP5 2266 aa1.04□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 DEFB130BP0DP73 79 aa1.03□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 DEFB130AP0DP74 79 aa1.03□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 IQGAP1P46940 1657 aa1.03□□□□□ -2.24
TRAPPC2P4-201ENST00000421750 TRPM2O94759 1503 aa1.02□□□□□ -2.25
TRAPPC2P4-201ENST00000421750 LMO7Q8WWI1 1683 aa1.01□□□□□ -2.25
TRAPPC2P4-201ENST00000421750 MEGF8Q7Z7M0 2845 aa1.01□□□□□ -2.25
TRAPPC2P4-201ENST00000421750 CDC42BPAQ5VT25 1732 aa1.01□□□□□ -2.25
TRAPPC2P4-201ENST00000421750 TFF3Q07654 80 aa1□□□□□ -2.25
TRAPPC2P4-201ENST00000421750 FCGBPQ9Y6R7 5405 aaPredicted RBP0.99□□□□□ -2.25
TRAPPC2P4-201ENST00000421750 RPS27P42677 84 aaKnown RBP0.99□□□□□ -2.25
TRAPPC2P4-201ENST00000421750 DEFB109BQ30KR1 87 aa0.99□□□□□ -2.25
TRAPPC2P4-201ENST00000421750 RPS27LQ71UM5 84 aaKnown RBP0.99□□□□□ -2.25
TRAPPC2P4-201ENST00000421750 ATP7AQ04656 1500 aa0.99□□□□□ -2.25
TRAPPC2P4-201ENST00000421750 DDX60Q8IY21 1712 aaKnown RBP0.98□□□□□ -2.25
TRAPPC2P4-201ENST00000421750 NFAT5O94916 1531 aa0.97□□□□□ -2.25
TRAPPC2P4-201ENST00000421750 HELZ2Q9BYK8 2649 aaKnown RBP0.96□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 BPTFQ12830 3046 aa0.96□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 CNOT1A5YKK6 2376 aaKnown RBP0.96□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 ZNF462Q96JM2 2506 aa0.95□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 TTC28Q96AY4 2481 aa0.95□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 PTPRQQ9UMZ3 2332 aa0.94□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 SMIM2Q9BVW6 85 aa0.94□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 SAMD9LQ8IVG5 1584 aa0.94□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 USF3Q68DE3 2245 aa0.93□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 WT1-ASQ06250 92 aa0.93□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 PTPRZ1P23471 2315 aaPredicted RBP0.93□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 KIF21BO75037 1637 aa0.92□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 CACNA1HO95180 2353 aa0.92□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 DOPEY2Q9Y3R5 2298 aa0.91□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 SPINK6Q6UWN8 80 aa0.91□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 WFDC10BQ8IUB3 73 aa0.91□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 C2CD3Q4AC94 2353 aa0.91□□□□□ -2.26
TRAPPC2P4-201ENST00000421750 POLQO75417 2590 aa0.9□□□□□ -2.27
TRAPPC2P4-201ENST00000421750 NDUFA1O15239 70 aa0.9□□□□□ -2.27
TRAPPC2P4-201ENST00000421750 DEFB106AQ8N104 65 aa0.9□□□□□ -2.27
TRAPPC2P4-201ENST00000421750 KAAG1Q9UBP8 84 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms