RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 COL7A1Q02388 2944 aa12.24□□□□□ -0.45
CROCCP3-202ENST00000420820 TRBV7-4A0A0J9YYF1 115 aa12.24□□□□□ -0.45
CROCCP3-202ENST00000420820 KRTAP7-1Q8IUC3 87 aa12.24□□□□□ -0.45
CROCCP3-202ENST00000420820 ATP5EP2Q5VTU8 51 aa12.23□□□□□ -0.45
CROCCP3-202ENST00000420820 M0R2N4 97 aa12.23□□□□□ -0.45
CROCCP3-202ENST00000420820 FAM168BA1KXE4 195 aa12.21□□□□□ -0.45
CROCCP3-202ENST00000420820 KRTAP1-5Q9BYS1 174 aa12.21□□□□□ -0.45
CROCCP3-202ENST00000420820 KRTAP4-16G5E9R7 235 aaPredicted RBP12.21□□□□□ -0.46
CROCCP3-202ENST00000420820 IGLV1-50A0A075B6I6 118 aa12.2□□□□□ -0.46
CROCCP3-202ENST00000420820 SPRR1AP35321 89 aa12.2□□□□□ -0.46
CROCCP3-202ENST00000420820 UBL5Q9BZL1 73 aa12.2□□□□□ -0.46
CROCCP3-202ENST00000420820 APLNQ9ULZ1 77 aa12.19□□□□□ -0.46
CROCCP3-202ENST00000420820 DNAH10Q8IVF4 4471 aa12.19□□□□□ -0.46
CROCCP3-202ENST00000420820 B5MCH6 92 aa12.19□□□□□ -0.46
CROCCP3-202ENST00000420820 LOC107984640A0A0U1RRK4 108 aa12.18□□□□□ -0.46
CROCCP3-202ENST00000420820 PRYO14603 147 aa12.18□□□□□ -0.46
CROCCP3-202ENST00000420820 B9D2Q9BPU9 175 aa12.18□□□□□ -0.46
CROCCP3-202ENST00000420820 STAB2Q8WWQ8 2551 aa12.17□□□□□ -0.46
CROCCP3-202ENST00000420820 A0A087WVE0 104 aa12.16□□□□□ -0.46
CROCCP3-202ENST00000420820 LYSTQ99698 3801 aa12.16□□□□□ -0.46
CROCCP3-202ENST00000420820 ATOX1O00244 68 aa12.15□□□□□ -0.46
CROCCP3-202ENST00000420820 Q6ZRX8 168 aa12.15□□□□□ -0.46
CROCCP3-202ENST00000420820 RPL37AP8A6NKH3 93 aa12.14□□□□□ -0.47
CROCCP3-202ENST00000420820 LINC01547P58512 204 aaPredicted RBP12.13□□□□□ -0.47
CROCCP3-202ENST00000420820 DHRS4-AS1Q9P1J3 65 aa12.13□□□□□ -0.47
CROCCP3-202ENST00000420820 CNBPP62633 177 aaKnown RBP12.13□□□□□ -0.47
CROCCP3-202ENST00000420820 Q6ZVQ6 151 aa12.13□□□□□ -0.47
CROCCP3-202ENST00000420820 MRPL55Q7Z7F7 128 aaKnown RBP12.13□□□□□ -0.47
CROCCP3-202ENST00000420820 Q9BRP9 147 aa12.13□□□□□ -0.47
CROCCP3-202ENST00000420820 Q8N377 158 aa12.12□□□□□ -0.47
CROCCP3-202ENST00000420820 C3orf22Q8N5N4 141 aa12.12□□□□□ -0.47
CROCCP3-202ENST00000420820 UQCRQO14949 82 aa12.11□□□□□ -0.47
CROCCP3-202ENST00000420820 FAM19A5Q7Z5A7 132 aaPredicted RBP12.09□□□□□ -0.47
CROCCP3-202ENST00000420820 FAM19A1Q7Z5A9 133 aa12.09□□□□□ -0.47
CROCCP3-202ENST00000420820 COX7CP15954 63 aa12.09□□□□□ -0.47
CROCCP3-202ENST00000420820 UBE2DNLQ8IWF7 75 aa12.09□□□□□ -0.47
CROCCP3-202ENST00000420820 PLECQ15149 4684 aaKnown RBP12.08□□□□□ -0.48
CROCCP3-202ENST00000420820 ETDCA0A1B0GVM5 59 aa12.07□□□□□ -0.48
CROCCP3-202ENST00000420820 IGLV5-48A0A075B6I7 105 aa12.07□□□□□ -0.48
CROCCP3-202ENST00000420820 C16orf90A8MZG2 172 aa12.07□□□□□ -0.48
CROCCP3-202ENST00000420820 CSMD3Q7Z407 3707 aa12.07□□□□□ -0.48
CROCCP3-202ENST00000420820 A0A096LNI7 61 aa12.05□□□□□ -0.48
CROCCP3-202ENST00000420820 CXCL6P80162 114 aa12.05□□□□□ -0.48
CROCCP3-202ENST00000420820 DNAH7Q8WXX0 4024 aa12.04□□□□□ -0.48
CROCCP3-202ENST00000420820 PSCAO43653 123 aa12.04□□□□□ -0.48
CROCCP3-202ENST00000420820 SS18L2Q9UHA2 77 aa12.04□□□□□ -0.48
CROCCP3-202ENST00000420820 DEFB105AQ8NG35 78 aa12.03□□□□□ -0.48
CROCCP3-202ENST00000420820 HAMPP81172 84 aa12.02□□□□□ -0.49
CROCCP3-202ENST00000420820 TNP2Q05952 138 aa12.02□□□□□ -0.49
CROCCP3-202ENST00000420820 C14orf177Q52M58 125 aa12.02□□□□□ -0.49
CROCCP3-202ENST00000420820 REG3GQ6UW15 175 aa12.02□□□□□ -0.49
CROCCP3-202ENST00000420820 SERP2Q8N6R1 65 aa12.02□□□□□ -0.49
CROCCP3-202ENST00000420820 C9orf153Q5TBE3 101 aa12.01□□□□□ -0.49
CROCCP3-202ENST00000420820 MEGF8Q7Z7M0 2845 aa12.01□□□□□ -0.49
CROCCP3-202ENST00000420820 A0A1W2PNN7 141 aa12□□□□□ -0.49
CROCCP3-202ENST00000420820 ERC2-IT1O76042 136 aa12□□□□□ -0.49
CROCCP3-202ENST00000420820 CRYGAP11844 174 aa12□□□□□ -0.49
CROCCP3-202ENST00000420820 ST20-AS1Q8NBB2 130 aa12□□□□□ -0.49
CROCCP3-202ENST00000420820 NUPR2A6NF83 97 aa11.99□□□□□ -0.49
CROCCP3-202ENST00000420820 VPS13DQ5THJ4 4388 aa11.98□□□□□ -0.49
CROCCP3-202ENST00000420820 LRCOL1A6NCL2 159 aa11.98□□□□□ -0.49
CROCCP3-202ENST00000420820 PRKDCP78527 4128 aaKnown RBP11.98□□□□□ -0.49
CROCCP3-202ENST00000420820 NBDYA0A0U1RRE5 68 aa11.98□□□□□ -0.49
CROCCP3-202ENST00000420820 IGKV2-24A0A0C4DH68 120 aa11.97□□□□□ -0.49
CROCCP3-202ENST00000420820 BCE1O60756 84 aa11.96□□□□□ -0.5
CROCCP3-202ENST00000420820 Q6ZRN7 208 aaPredicted RBP11.96□□□□□ -0.5
CROCCP3-202ENST00000420820 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.95□□□□□ -0.5
CROCCP3-202ENST00000420820 A0A1B0GW54 56 aa11.95□□□□□ -0.5
CROCCP3-202ENST00000420820 UBE2BP63146 152 aa11.95□□□□□ -0.5
CROCCP3-202ENST00000420820 C9orf163Q8N9P6 203 aa11.94□□□□□ -0.5
CROCCP3-202ENST00000420820 TENM2Q9NT68 2774 aa11.92□□□□□ -0.5
CROCCP3-202ENST00000420820 A0A1W2PNM2 257 aa11.92□□□□□ -0.5
CROCCP3-202ENST00000420820 SMIM29Q86T20 159 aa11.92□□□□□ -0.5
CROCCP3-202ENST00000420820 STARD9Q9P2P6 4700 aa11.91□□□□□ -0.5
CROCCP3-202ENST00000420820 C1orf137Q5JT78 98 aa11.9□□□□□ -0.5
CROCCP3-202ENST00000420820 SCXQ7RTU7 201 aa11.9□□□□□ -0.5
CROCCP3-202ENST00000420820 CHTF8P0CG12 524 aa11.89□□□□□ -0.51
CROCCP3-202ENST00000420820 NREPQ16612 68 aa11.89□□□□□ -0.51
CROCCP3-202ENST00000420820 C3orf84H3BNL1 204 aa11.88□□□□□ -0.51
CROCCP3-202ENST00000420820 FUSP35637 526 aaKnown RBP eCLIP11.88□□□□□ -0.51
CROCCP3-202ENST00000420820 CYSTM1Q9H1C7 97 aa11.88□□□□□ -0.51
CROCCP3-202ENST00000420820 KRTAP11-1Q8IUC1 163 aa11.88□□□□□ -0.51
CROCCP3-202ENST00000420820 Q8NBF4 154 aa11.88□□□□□ -0.51
CROCCP3-202ENST00000420820 SPRR4Q96PI1 79 aa11.88□□□□□ -0.51
CROCCP3-202ENST00000420820 PKIGQ9Y2B9 76 aa11.88□□□□□ -0.51
CROCCP3-202ENST00000420820 PRLHP81277 87 aa11.86□□□□□ -0.51
CROCCP3-202ENST00000420820 PHF5AQ7RTV0 110 aaKnown RBP11.86□□□□□ -0.51
CROCCP3-202ENST00000420820 H0Y9J4 135 aa11.84□□□□□ -0.51
CROCCP3-202ENST00000420820 TRAV7A0A075B6U4 112 aa11.84□□□□□ -0.51
CROCCP3-202ENST00000420820 SMIM20Q8N5G0 67 aa11.84□□□□□ -0.51
CROCCP3-202ENST00000420820 IGKV4-1P06312 121 aa11.83□□□□□ -0.52
CROCCP3-202ENST00000420820 LINC00474Q9P2X8 69 aa11.82□□□□□ -0.52
CROCCP3-202ENST00000420820 IGLV8-61A0A075B6I0 122 aa11.82□□□□□ -0.52
CROCCP3-202ENST00000420820 FBN3Q75N90 2809 aa11.81□□□□□ -0.52
CROCCP3-202ENST00000420820 BPY2O14599 106 aa11.81□□□□□ -0.52
CROCCP3-202ENST00000420820 LINC00476Q8WZB0 136 aa11.81□□□□□ -0.52
CROCCP3-202ENST00000420820 EPM2AB3EWF7 344 aa11.79□□□□□ -0.52
CROCCP3-202ENST00000420820 PANO1I0J062 215 aa11.79□□□□□ -0.52
CROCCP3-202ENST00000420820 Q8N9L7 120 aa11.79□□□□□ -0.52
CROCCP3-202ENST00000420820 HIGD2AQ9BW72 106 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms