RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TRBV7-1A0A0A6YYK4 115 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 A0A1B0GUT8 65 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 IQCF6A8MYZ5 107 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 NCR3O14931 201 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 SPINK4O60575 86 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 ASIPP42127 132 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 UBE2D3P61077 147 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 UBE2D2P62837 147 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 PRCDQ00LT1 54 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 CFAP126Q5VTH2 177 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 KRTAP5-10Q6L8G5 202 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 MYOZ3Q8TDC0 251 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 Q96NJ1 140 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 C20orf78Q9BR46 151 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 CNFNQ9BYD5 112 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 CYP4F30PQ9H0H9 118 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 HILPDAQ9Y5L2 63 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 DMDP11532 3685 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 CEP250Q9BV73 2442 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 AKAP13Q12802 2813 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 ATMQ13315 3056 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 PKDREJQ9NTG1 2253 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 DOPEY2Q9Y3R5 2298 aa0.99□□□□□ -2.25
HMGB1P49-201ENST00000418882 CACNA1HO95180 2353 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 SMG1Q96Q15 3661 aaKnown RBP0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 SPENQ96T58 3664 aaKnown RBP0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 MYMXA0A1B0GTQ4 84 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 ARMS2P0C7Q2 107 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 FCER1GP30273 86 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 IFI27P40305 119 aaPredicted RBP0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 CRIP1P50238 77 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 KLKP1Q107X0 134 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 SPINK9Q5DT21 86 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 DEFB121Q5J5C9 76 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 Q5VV11 94 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 C10orf113Q5VZT2 155 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 TRGV9Q99603 122 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 NXT2Q9NPJ8 142 aaKnown RBP0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 NDUFA4L2Q9NRX3 87 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 CELSR1Q9NYQ6 3014 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 BSNQ9UPA5 3926 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 CRYBG3Q68DQ2 2970 aa0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 SPTBN1Q01082 2364 aaKnown RBP0.98□□□□□ -2.25
HMGB1P49-201ENST00000418882 MAP1BP46821 2468 aaKnown RBP0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 SPTBN2O15020 2390 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 COL12A1Q99715 3063 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 CSMD1Q96PZ7 3565 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 TRBV30A0A0K0K1B3 111 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 TRBV7-7A0A0K0K1E9 115 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 DEFB108AA8MXU0 73 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 D6R8Y8 96 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 K7EMI3 77 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 MRPL33O75394 65 aaKnown RBP0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 LY6G6CO95867 125 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 ANGP03950 147 aaKnown RBP0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 SAA2P0DJI9 122 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 COX6B1P14854 86 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 PLNP26678 52 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 ZNF137PP52743 207 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 ATP5EP56381 51 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 WT1-ASQ06250 92 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 DEFB133Q30KQ1 61 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 RPL39P5Q59GN2 51 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 TMEM167AQ8TBQ9 72 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 PLAC4Q8WY50 150 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 BPESC1Q9GZL8 116 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 U3KQA8 63 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 NCOR1O75376 2440 aa0.97□□□□□ -2.25
HMGB1P49-201ENST00000418882 LINC01549A6NIU2 74 aa0.96□□□□□ -2.26
HMGB1P49-201ENST00000418882 F8VRH5 84 aa0.96□□□□□ -2.26
HMGB1P49-201ENST00000418882 I3L2K1 104 aa0.96□□□□□ -2.26
HMGB1P49-201ENST00000418882 PLGLAQ15195 96 aa0.96□□□□□ -2.26
HMGB1P49-201ENST00000418882 KLK9Q2XQG4 91 aa0.96□□□□□ -2.26
HMGB1P49-201ENST00000418882 AMELXQ99217 191 aa0.96□□□□□ -2.26
HMGB1P49-201ENST00000418882 AKAP6Q13023 2319 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 SPTA1P02549 2419 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 TRAV22A0A0B4J277 110 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 IGIPA6NJ69 53 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 ZNF815PA8K554 130 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 K7EIM0 57 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 PPP1R17O96001 155 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 ACYP1P07311 99 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 ATXN8Q156A1 80 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 TMEM170BQ5T4T1 132 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 C10orf99Q6UWK7 81 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 Q8N6K4 173 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 TMEM263Q8WUH6 116 aaKnown RBP0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 GAFA1Q96PS6 74 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 SMIM2Q9BVW6 85 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 PRO1854Q9UHT4 67 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 LENEPQ9Y5L5 61 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 HRNRQ86YZ3 2850 aaPredicted RBP0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 ACACAQ13085 2346 aa0.95□□□□□ -2.26
HMGB1P49-201ENST00000418882 ZDBF2Q9HCK1 2354 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 LAMA5O15230 3695 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 ALMS1Q8TCU4 4167 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 SPTAN1Q13813 2472 aaKnown RBP0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 ZFHX4Q86UP3 3567 aa0.94□□□□□ -2.26
HMGB1P49-201ENST00000418882 ZFHX3Q15911 3703 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms