RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 A0A1B0GW54 56 aa1.65□□□□□ -2.15
VPS41-206ENST00000418457 H7BZZ5 65 aa1.65□□□□□ -2.15
VPS41-206ENST00000418457 PFN2P35080 140 aa1.65□□□□□ -2.15
VPS41-206ENST00000418457 C10orf99Q6UWK7 81 aa1.65□□□□□ -2.15
VPS41-206ENST00000418457 HRCT1Q6UXD1 115 aa1.65□□□□□ -2.15
VPS41-206ENST00000418457 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.65□□□□□ -2.15
VPS41-206ENST00000418457 LINC00575Q6W349 94 aa1.65□□□□□ -2.15
VPS41-206ENST00000418457 Q6ZQT0 140 aa1.65□□□□□ -2.15
VPS41-206ENST00000418457 Q6ZTI0 123 aa1.65□□□□□ -2.15
VPS41-206ENST00000418457 CYSTM1Q9H1C7 97 aa1.65□□□□□ -2.15
VPS41-206ENST00000418457 LAMTOR3Q9UHA4 124 aa1.65□□□□□ -2.15
VPS41-206ENST00000418457 VPS13CQ709C8 3753 aa1.65□□□□□ -2.15
VPS41-206ENST00000418457 SPTBN1Q01082 2364 aaKnown RBP1.65□□□□□ -2.15
VPS41-206ENST00000418457 COL6A6A6NMZ7 2263 aa1.65□□□□□ -2.15
VPS41-206ENST00000418457 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.65□□□□□ -2.15
VPS41-206ENST00000418457 TLN1Q9Y490 2541 aaKnown RBP1.64□□□□□ -2.15
VPS41-206ENST00000418457 IGLV4-60A0A075B6I1 120 aa1.64□□□□□ -2.15
VPS41-206ENST00000418457 GVQW2A0A096LPI5 108 aaPredicted RBP1.64□□□□□ -2.15
VPS41-206ENST00000418457 IGKV3OR2-268A0A0C4DH90 116 aa1.64□□□□□ -2.15
VPS41-206ENST00000418457 C19orf84I3L1E1 186 aa1.64□□□□□ -2.15
VPS41-206ENST00000418457 OXTP01178 125 aa1.64□□□□□ -2.15
VPS41-206ENST00000418457 MIFP14174 115 aa1.64□□□□□ -2.15
VPS41-206ENST00000418457 KIAA0087Q14695 138 aa1.64□□□□□ -2.15
VPS41-206ENST00000418457 C4orf26Q17RF5 130 aa1.64□□□□□ -2.15
VPS41-206ENST00000418457 C11orf68Q9H3H3 251 aaKnown RBP1.64□□□□□ -2.15
VPS41-206ENST00000418457 NOP10Q9NPE3 64 aaKnown RBP1.64□□□□□ -2.15
VPS41-206ENST00000418457 PTPRQQ9UMZ3 2332 aa1.64□□□□□ -2.15
VPS41-206ENST00000418457 ZNF469Q96JG9 3925 aaPredicted RBP1.64□□□□□ -2.15
VPS41-206ENST00000418457 PTPN13Q12923 2485 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 DCHS2Q6V1P9 2916 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.63□□□□□ -2.15
VPS41-206ENST00000418457 A0A096LNT2 108 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 TRBV7-4A0A0J9YYF1 115 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 PLAC8L1A1L4L8 177 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 LYRM9A8MSI8 78 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 F8WEM9 126 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 IGLV6-57P01721 117 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 PRM2P04554 102 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 COX7BP24311 80 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 HAMPP81172 84 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 NREPQ16612 68 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 DEFB136Q30KP8 78 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 C6orf99Q4VX62 202 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 LCE3AQ5TA76 89 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 CAMK2N1Q7Z7J9 78 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 DIRC1Q969H9 104 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 RETNQ9HD89 108 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 PRO0255Q9UI72 69 aa1.63□□□□□ -2.15
VPS41-206ENST00000418457 SPTA1P02549 2419 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 HRNRQ86YZ3 2850 aaPredicted RBP1.62□□□□□ -2.15
VPS41-206ENST00000418457 TEP1Q99973 2627 aaKnown RBP1.62□□□□□ -2.15
VPS41-206ENST00000418457 CUBNO60494 3623 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 FBN3Q75N90 2809 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 BPY2O14599 106 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 IGLV1-51P01701 117 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 ELOF1P60002 83 aaKnown RBP1.62□□□□□ -2.15
VPS41-206ENST00000418457 REG3AQ06141 175 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 SPAG11BQ08648 103 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 C1orf195Q5TG92 126 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 Q6ZQY7 126 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 WFDC9Q8NEX5 89 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 TMEM254Q8TBM7 123 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 C16orf95Q9H693 158 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 HIVEP3Q5T1R4 2406 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 ANK3Q12955 4377 aaKnown RBP1.62□□□□□ -2.15
VPS41-206ENST00000418457 ANK2Q01484 3957 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 MYO9AB2RTY4 2548 aa1.62□□□□□ -2.15
VPS41-206ENST00000418457 CENPEQ02224 2701 aa1.61□□□□□ -2.15
VPS41-206ENST00000418457 USP9XQ93008 2570 aaPredicted RBP1.61□□□□□ -2.15
VPS41-206ENST00000418457 SPTAN1Q13813 2472 aaKnown RBP1.61□□□□□ -2.15
VPS41-206ENST00000418457 NAV2Q8IVL1 2488 aa1.61□□□□□ -2.15
VPS41-206ENST00000418457 SORL1Q92673 2214 aa1.61□□□□□ -2.15
VPS41-206ENST00000418457 IGKV2D-24A0A075B6R9 120 aa1.61□□□□□ -2.15
VPS41-206ENST00000418457 TRAV10A0A0B4J240 114 aa1.61□□□□□ -2.15
VPS41-206ENST00000418457 A0A0U1RQV1 116 aa1.61□□□□□ -2.15
VPS41-206ENST00000418457 M0R378 163 aa1.61□□□□□ -2.15
VPS41-206ENST00000418457 ZNF73O43830 326 aaPredicted RBP1.61□□□□□ -2.15
VPS41-206ENST00000418457 ANGP03950 147 aaKnown RBP1.61□□□□□ -2.15
VPS41-206ENST00000418457 FUSP35637 526 aaKnown RBP eCLIP1.61□□□□□ -2.15
VPS41-206ENST00000418457 ESRGQ1W209 222 aa1.61□□□□□ -2.15
VPS41-206ENST00000418457 LELP1Q5T871 98 aa1.61□□□□□ -2.15
VPS41-206ENST00000418457 FP248Q71RG6 208 aaPredicted RBP1.61□□□□□ -2.15
VPS41-206ENST00000418457 LINC00269Q8N2A0 174 aa1.61□□□□□ -2.15
VPS41-206ENST00000418457 RMI2Q96E14 147 aa1.61□□□□□ -2.15
VPS41-206ENST00000418457 SNURFQ9Y675 71 aa1.61□□□□□ -2.15
VPS41-206ENST00000418457 TACC2O95359 2948 aa1.61□□□□□ -2.15
VPS41-206ENST00000418457 ITPR2Q14571 2701 aa1.6□□□□□ -2.15
VPS41-206ENST00000418457 ABCA12Q86UK0 2595 aa1.6□□□□□ -2.15
VPS41-206ENST00000418457 APCP25054 2843 aa1.6□□□□□ -2.15
VPS41-206ENST00000418457 NDUFB1O75438 58 aa1.6□□□□□ -2.15
VPS41-206ENST00000418457 IGKV4-1P06312 121 aa1.6□□□□□ -2.15
VPS41-206ENST00000418457 DEFB130BP0DP73 79 aa1.6□□□□□ -2.15
VPS41-206ENST00000418457 DEFB130AP0DP74 79 aa1.6□□□□□ -2.15
VPS41-206ENST00000418457 PRR3P79522 188 aaKnown RBP1.6□□□□□ -2.15
VPS41-206ENST00000418457 DEFB113Q30KQ7 82 aa1.6□□□□□ -2.15
VPS41-206ENST00000418457 TM2D3Q9BRN9 247 aa1.6□□□□□ -2.15
VPS41-206ENST00000418457 USP9YO00507 2555 aaPredicted RBP1.6□□□□□ -2.15
VPS41-206ENST00000418457 CR1P17927 2039 aa1.6□□□□□ -2.15
VPS41-206ENST00000418457 AKAP6Q13023 2319 aa1.6□□□□□ -2.15
VPS41-206ENST00000418457 LRRK2Q5S007 2527 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms