RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 FN1P02751 2386 aaKnown RBP7.8□□□□□ -1.16
UBR4-205ENST00000417040 CYSTM1Q9H1C7 97 aa7.79□□□□□ -1.16
UBR4-205ENST00000417040 ZNF575Q86XF7 245 aa7.77□□□□□ -1.16
UBR4-205ENST00000417040 CDC42SE1Q9NRR8 79 aa7.77□□□□□ -1.16
UBR4-205ENST00000417040 CACNA1AO00555 2505 aa7.77□□□□□ -1.16
UBR4-205ENST00000417040 C19orf73Q9NVV2 129 aa7.75□□□□□ -1.17
UBR4-205ENST00000417040 ZNF861PO60384 105 aa7.74□□□□□ -1.17
UBR4-205ENST00000417040 Q5XG85 94 aa7.74□□□□□ -1.17
UBR4-205ENST00000417040 IGLV5-48A0A075B6I7 105 aa7.73□□□□□ -1.17
UBR4-205ENST00000417040 LINC01554Q52M75 96 aa7.73□□□□□ -1.17
UBR4-205ENST00000417040 PRR26Q8N8Z3 221 aa7.73□□□□□ -1.17
UBR4-205ENST00000417040 OCR1Q9BZK8 76 aa7.73□□□□□ -1.17
UBR4-205ENST00000417040 SMR3BP02814 79 aaPredicted RBP7.73□□□□□ -1.17
UBR4-205ENST00000417040 Q1T7F1 81 aa7.72□□□□□ -1.17
UBR4-205ENST00000417040 FAM104AQ969W3 186 aa7.72□□□□□ -1.17
UBR4-205ENST00000417040 LINC00304Q8N9R0 145 aa7.71□□□□□ -1.17
UBR4-205ENST00000417040 C9orf163Q8N9P6 203 aa7.71□□□□□ -1.18
UBR4-205ENST00000417040 SPANXA2-OT1Q8N9U9 137 aa7.71□□□□□ -1.18
UBR4-205ENST00000417040 PLA2G2DQ9UNK4 145 aa7.71□□□□□ -1.18
UBR4-205ENST00000417040 TLX1NBP0CAT3 122 aa7.7□□□□□ -1.18
UBR4-205ENST00000417040 RBM12B-AS1Q9P1G2 102 aa7.7□□□□□ -1.18
UBR4-205ENST00000417040 NCOR2Q9Y618 2525 aa7.7□□□□□ -1.18
UBR4-205ENST00000417040 K7EIL1 84 aa7.69□□□□□ -1.18
UBR4-205ENST00000417040 PSORS1C2Q9UIG4 136 aa7.69□□□□□ -1.18
UBR4-205ENST00000417040 BPTFQ12830 3046 aa7.69□□□□□ -1.18
UBR4-205ENST00000417040 LINC00612Q8N6U2 182 aa7.68□□□□□ -1.18
UBR4-205ENST00000417040 SPRR4Q96PI1 79 aa7.68□□□□□ -1.18
UBR4-205ENST00000417040 PRAC1Q96KF2 57 aa7.67□□□□□ -1.18
UBR4-205ENST00000417040 A0A096LNT2 108 aa7.67□□□□□ -1.18
UBR4-205ENST00000417040 MYO9AB2RTY4 2548 aa7.67□□□□□ -1.18
UBR4-205ENST00000417040 A0A087WTM6 91 aa7.66□□□□□ -1.18
UBR4-205ENST00000417040 LRRK2Q5S007 2527 aa7.65□□□□□ -1.18
UBR4-205ENST00000417040 WIPF1O43516 503 aa7.65□□□□□ -1.18
UBR4-205ENST00000417040 IGLV7-43P04211 117 aa7.65□□□□□ -1.18
UBR4-205ENST00000417040 C5orf42Q9H799 3197 aa7.65□□□□□ -1.19
UBR4-205ENST00000417040 MYO18BQ8IUG5 2567 aa7.64□□□□□ -1.19
UBR4-205ENST00000417040 FP248Q71RG6 208 aaPredicted RBP7.64□□□□□ -1.19
UBR4-205ENST00000417040 IGLV5-37A0A075B6J1 123 aa7.64□□□□□ -1.19
UBR4-205ENST00000417040 COX6B2Q6YFQ2 88 aa7.63□□□□□ -1.19
UBR4-205ENST00000417040 PCNTO95613 3336 aa7.63□□□□□ -1.19
UBR4-205ENST00000417040 TLN1Q9Y490 2541 aaKnown RBP7.63□□□□□ -1.19
UBR4-205ENST00000417040 CNBPP62633 177 aaKnown RBP7.62□□□□□ -1.19
UBR4-205ENST00000417040 ABCA12Q86UK0 2595 aa7.62□□□□□ -1.19
UBR4-205ENST00000417040 Q8NDZ9 215 aa7.61□□□□□ -1.19
UBR4-205ENST00000417040 Q75L30 129 aa7.59□□□□□ -1.19
UBR4-205ENST00000417040 DOPEY1Q5JWR5 2465 aa7.59□□□□□ -1.19
UBR4-205ENST00000417040 H3BS24 57 aa7.58□□□□□ -1.2
UBR4-205ENST00000417040 IGLV7-46A0A075B6I9 117 aa7.58□□□□□ -1.2
UBR4-205ENST00000417040 HRES1P13985 223 aa7.57□□□□□ -1.2
UBR4-205ENST00000417040 OXTP01178 125 aa7.57□□□□□ -1.2
UBR4-205ENST00000417040 J3QL48 77 aa7.56□□□□□ -1.2
UBR4-205ENST00000417040 WWC2-AS2Q96NR7 200 aa7.56□□□□□ -1.2
UBR4-205ENST00000417040 TLN2Q9Y4G6 2542 aa7.56□□□□□ -1.2
UBR4-205ENST00000417040 JMJD1CQ15652 2540 aa7.55□□□□□ -1.2
UBR4-205ENST00000417040 CR1P17927 2039 aa7.55□□□□□ -1.2
UBR4-205ENST00000417040 CEP350Q5VT06 3117 aa7.55□□□□□ -1.2
UBR4-205ENST00000417040 Q8N9P0 234 aaPredicted RBP7.54□□□□□ -1.2
UBR4-205ENST00000417040 Q5VV11 94 aa7.54□□□□□ -1.2
UBR4-205ENST00000417040 SETD2Q9BYW2 2564 aaPredicted RBP7.53□□□□□ -1.2
UBR4-205ENST00000417040 SPINK7P58062 85 aa7.53□□□□□ -1.2
UBR4-205ENST00000417040 USP9XQ93008 2570 aaPredicted RBP7.52□□□□□ -1.21
UBR4-205ENST00000417040 CSAG1Q6PB30 78 aa7.52□□□□□ -1.21
UBR4-205ENST00000417040 A0A1B0GU33 70 aa7.51□□□□□ -1.21
UBR4-205ENST00000417040 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.5□□□□□ -1.21
UBR4-205ENST00000417040 ANKRD17O75179 2603 aaKnown RBP7.5□□□□□ -1.21
UBR4-205ENST00000417040 MMP24-AS1A0A0U1RRL7 71 aa7.49□□□□□ -1.21
UBR4-205ENST00000417040 LINC01558Q9Y6Z2 57 aa7.49□□□□□ -1.21
UBR4-205ENST00000417040 KRTAP1-3Q8IUG1 177 aa7.47□□□□□ -1.21
UBR4-205ENST00000417040 LUZP6Q538Z0 58 aa7.46□□□□□ -1.22
UBR4-205ENST00000417040 PKD1L2Q7Z442 2459 aa7.45□□□□□ -1.22
UBR4-205ENST00000417040 ZFYVE26Q68DK2 2539 aa7.43□□□□□ -1.22
UBR4-205ENST00000417040 ANKRD11Q6UB99 2663 aaPredicted RBP7.43□□□□□ -1.22
UBR4-205ENST00000417040 POLQO75417 2590 aa7.42□□□□□ -1.22
UBR4-205ENST00000417040 TNP2Q05952 138 aa7.42□□□□□ -1.22
UBR4-205ENST00000417040 KRTAP1-1Q07627 177 aa7.4□□□□□ -1.22
UBR4-205ENST00000417040 Q5W150 140 aa7.39□□□□□ -1.23
UBR4-205ENST00000417040 ZNF462Q96JM2 2506 aa7.38□□□□□ -1.23
UBR4-205ENST00000417040 USP9YO00507 2555 aaPredicted RBP7.38□□□□□ -1.23
UBR4-205ENST00000417040 A0A0C4DFX4 3053 aa7.38□□□□□ -1.23
UBR4-205ENST00000417040 CAMK2N1Q7Z7J9 78 aa7.35□□□□□ -1.23
UBR4-205ENST00000417040 CEP295Q9C0D2 2601 aa7.35□□□□□ -1.23
UBR4-205ENST00000417040 MKI67P46013 3256 aaKnown RBP7.34□□□□□ -1.23
UBR4-205ENST00000417040 ZCCHC13Q8WW36 166 aaKnown RBP7.34□□□□□ -1.23
UBR4-205ENST00000417040 LINC00472Q9H8W2 130 aa7.34□□□□□ -1.23
UBR4-205ENST00000417040 Q6ZSA8 131 aa7.33□□□□□ -1.24
UBR4-205ENST00000417040 S4R3F8 94 aa7.32□□□□□ -1.24
UBR4-205ENST00000417040 ACANP16112 2415 aa7.32□□□□□ -1.24
UBR4-205ENST00000417040 SPRR1AP35321 89 aa7.32□□□□□ -1.24
UBR4-205ENST00000417040 MTORP42345 2549 aa7.31□□□□□ -1.24
UBR4-205ENST00000417040 PRRC2CQ9Y520 2896 aaKnown RBP7.31□□□□□ -1.24
UBR4-205ENST00000417040 DMAC1Q96GE9 116 aa7.3□□□□□ -1.24
UBR4-205ENST00000417040 KRTAP26-1Q6PEX3 210 aa7.29□□□□□ -1.24
UBR4-205ENST00000417040 CFAP54Q96N23 3096 aa7.28□□□□□ -1.24
UBR4-205ENST00000417040 LINC00483Q53H64 154 aa7.27□□□□□ -1.25
UBR4-205ENST00000417040 SPTBN4Q9H254 2564 aa7.27□□□□□ -1.25
UBR4-205ENST00000417040 CHD8Q9HCK8 2581 aa7.26□□□□□ -1.25
UBR4-205ENST00000417040 SPATA8Q6RVD6 105 aa7.24□□□□□ -1.25
UBR4-205ENST00000417040 F8P00451 2351 aa7.23□□□□□ -1.25
UBR4-205ENST00000417040 PLAC8Q9NZF1 115 aa7.23□□□□□ -1.25
UBR4-205ENST00000417040 CHD7Q9P2D1 2997 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms