RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 Q5XG85 94 aa3.57□□□□□ -1.84
LINC00342-201ENST00000412393 LYPD5Q6UWN5 251 aa3.57□□□□□ -1.84
LINC00342-201ENST00000412393 SERP2Q8N6R1 65 aa3.57□□□□□ -1.84
LINC00342-201ENST00000412393 LINC00308Q8TCZ7 52 aa3.57□□□□□ -1.84
LINC00342-201ENST00000412393 DPH3Q96FX2 82 aa3.57□□□□□ -1.84
LINC00342-201ENST00000412393 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
LINC00342-201ENST00000412393 UBE2D4Q9Y2X8 147 aa3.57□□□□□ -1.84
LINC00342-201ENST00000412393 TRBV10-3A0A0K0K1G6 114 aa3.56□□□□□ -1.84
LINC00342-201ENST00000412393 C16orf90A8MZG2 172 aa3.56□□□□□ -1.84
LINC00342-201ENST00000412393 EPM2AB3EWF7 344 aa3.56□□□□□ -1.84
LINC00342-201ENST00000412393 BAALC-AS2P0C853 105 aa3.56□□□□□ -1.84
LINC00342-201ENST00000412393 PFN2P35080 140 aa3.56□□□□□ -1.84
LINC00342-201ENST00000412393 RPL18AQ02543 176 aaKnown RBP3.56□□□□□ -1.84
LINC00342-201ENST00000412393 Q6JHZ5 121 aa3.56□□□□□ -1.84
LINC00342-201ENST00000412393 HRCT1Q6UXD1 115 aa3.56□□□□□ -1.84
LINC00342-201ENST00000412393 SMCR5Q8TEV8 140 aa3.56□□□□□ -1.84
LINC00342-201ENST00000412393 ZNF625Q96I27 306 aaPredicted RBP3.56□□□□□ -1.84
LINC00342-201ENST00000412393 OPRPNQ99935 248 aaPredicted RBP3.56□□□□□ -1.84
LINC00342-201ENST00000412393 CHCHD7Q9BUK0 85 aa3.56□□□□□ -1.84
LINC00342-201ENST00000412393 TRAV13-2A0A0B4J235 113 aa3.55□□□□□ -1.84
LINC00342-201ENST00000412393 K7EQD1 137 aa3.55□□□□□ -1.84
LINC00342-201ENST00000412393 DAZ4Q86SG3 579 aaKnown RBP3.55□□□□□ -1.84
LINC00342-201ENST00000412393 CLEC2BQ92478 149 aa3.55□□□□□ -1.84
LINC00342-201ENST00000412393 DAZ3Q9NR90 486 aaKnown RBP3.55□□□□□ -1.84
LINC00342-201ENST00000412393 LAMTOR3Q9UHA4 124 aa3.55□□□□□ -1.84
LINC00342-201ENST00000412393 SERP1Q9Y6X1 66 aa3.55□□□□□ -1.84
LINC00342-201ENST00000412393 LRP1BQ9NZR2 4599 aa3.55□□□□□ -1.84
LINC00342-201ENST00000412393 TRAV8-3A0A0A6YYJ7 113 aa3.54□□□□□ -1.84
LINC00342-201ENST00000412393 LOC100131303A0A0U1RQF7 123 aa3.54□□□□□ -1.84
LINC00342-201ENST00000412393 H7C2G1 150 aa3.54□□□□□ -1.84
LINC00342-201ENST00000412393 C1orf195Q5TG92 126 aa3.54□□□□□ -1.84
LINC00342-201ENST00000412393 ATP5EP2Q5VTU8 51 aa3.54□□□□□ -1.84
LINC00342-201ENST00000412393 WFDC10BQ8IUB3 73 aa3.54□□□□□ -1.84
LINC00342-201ENST00000412393 LINC00167Q96N53 147 aa3.54□□□□□ -1.84
LINC00342-201ENST00000412393 RYR1P21817 5038 aa3.54□□□□□ -1.84
LINC00342-201ENST00000412393 DNAH5Q8TE73 4624 aa3.53□□□□□ -1.84
LINC00342-201ENST00000412393 TRBV10-1A0A0K0K1A3 114 aa3.53□□□□□ -1.84
LINC00342-201ENST00000412393 FAM236DA0A1B0GTK5 79 aa3.53□□□□□ -1.84
LINC00342-201ENST00000412393 hADV29S1A0JD25 119 aa3.53□□□□□ -1.84
LINC00342-201ENST00000412393 DNAH10OSP0CZ25 163 aa3.53□□□□□ -1.84
LINC00342-201ENST00000412393 FAM236CP0DP71 79 aa3.53□□□□□ -1.84
LINC00342-201ENST00000412393 C4orf26Q17RF5 130 aa3.53□□□□□ -1.84
LINC00342-201ENST00000412393 S100A7L2Q5SY68 101 aa3.53□□□□□ -1.84
LINC00342-201ENST00000412393 LINC00242Q5T6M2 205 aa3.53□□□□□ -1.84
LINC00342-201ENST00000412393 Q6ZRN7 208 aaPredicted RBP3.53□□□□□ -1.84
LINC00342-201ENST00000412393 CDKN2A-AS1Q9UH64 79 aa3.53□□□□□ -1.84
LINC00342-201ENST00000412393 HSPG2P98160 4391 aa3.53□□□□□ -1.84
LINC00342-201ENST00000412393 APOBP04114 4563 aaKnown RBP3.52□□□□□ -1.85
LINC00342-201ENST00000412393 SMIM26A0A096LP01 95 aa3.52□□□□□ -1.85
LINC00342-201ENST00000412393 IGHV3-73A0A0B4J1V6 119 aa3.52□□□□□ -1.85
LINC00342-201ENST00000412393 TRBV6-4A0A1B0GX49 114 aa3.52□□□□□ -1.85
LINC00342-201ENST00000412393 CDK2AP2O75956 126 aa3.52□□□□□ -1.85
LINC00342-201ENST00000412393 LINC01561Q8N1V8 128 aa3.52□□□□□ -1.85
LINC00342-201ENST00000412393 IGHV3-38A0A0C4DH36 116 aa3.51□□□□□ -1.85
LINC00342-201ENST00000412393 SMIM1B2RUZ4 78 aa3.51□□□□□ -1.85
LINC00342-201ENST00000412393 SOSTDC1Q6X4U4 206 aa3.51□□□□□ -1.85
LINC00342-201ENST00000412393 DSCR8Q96T75 97 aa3.51□□□□□ -1.85
LINC00342-201ENST00000412393 IGHV3-64A0A075B6Q5 118 aa3.5□□□□□ -1.85
LINC00342-201ENST00000412393 A0A087WTM6 91 aa3.5□□□□□ -1.85
LINC00342-201ENST00000412393 IBA57-AS1B1ANH7 110 aa3.5□□□□□ -1.85
LINC00342-201ENST00000412393 JMJD7-PLA2G4BH0Y9G9 81 aa3.5□□□□□ -1.85
LINC00342-201ENST00000412393 H3BQ85 93 aa3.5□□□□□ -1.85
LINC00342-201ENST00000412393 NDUFC1O43677 76 aa3.5□□□□□ -1.85
LINC00342-201ENST00000412393 CCKP06307 115 aa3.5□□□□□ -1.85
LINC00342-201ENST00000412393 FUSP35637 526 aaKnown RBP eCLIP3.5□□□□□ -1.85
LINC00342-201ENST00000412393 LINC01556Q5JQF7 62 aa3.5□□□□□ -1.85
LINC00342-201ENST00000412393 LELP1Q5T871 98 aa3.5□□□□□ -1.85
LINC00342-201ENST00000412393 FAM74A4Q5TZK3 123 aa3.5□□□□□ -1.85
LINC00342-201ENST00000412393 CDC42SE2Q9NRR3 84 aa3.5□□□□□ -1.85
LINC00342-201ENST00000412393 IGKV2-28A0A075B6P5 120 aa3.49□□□□□ -1.85
LINC00342-201ENST00000412393 A0A1B0GUV1 79 aa3.49□□□□□ -1.85
LINC00342-201ENST00000412393 USP17L23D6RBM5 183 aa3.49□□□□□ -1.85
LINC00342-201ENST00000412393 PSCAO43653 123 aa3.49□□□□□ -1.85
LINC00342-201ENST00000412393 DNAL4O96015 105 aa3.49□□□□□ -1.85
LINC00342-201ENST00000412393 OXTP01178 125 aa3.49□□□□□ -1.85
LINC00342-201ENST00000412393 IGKV2D-28P01615 120 aa3.49□□□□□ -1.85
LINC00342-201ENST00000412393 COX6A2Q02221 97 aa3.49□□□□□ -1.85
LINC00342-201ENST00000412393 FAM218AQ96MZ4 157 aa3.49□□□□□ -1.85
LINC00342-201ENST00000412393 TMEM243Q9BU79 118 aa3.49□□□□□ -1.85
LINC00342-201ENST00000412393 Q9HAA7 133 aa3.49□□□□□ -1.85
LINC00342-201ENST00000412393 LINC00846Q9NV44 126 aa3.49□□□□□ -1.85
LINC00342-201ENST00000412393 LINC00337Q8N6G1 96 aa3.48□□□□□ -1.85
LINC00342-201ENST00000412393 Q9UF83 564 aa3.48□□□□□ -1.85
LINC00342-201ENST00000412393 IGLV5-52A0A0A0MRZ9 124 aa3.47□□□□□ -1.85
LINC00342-201ENST00000412393 TMEM256-PLSCR3K7ERE1 68 aa3.47□□□□□ -1.85
LINC00342-201ENST00000412393 CRPP02741 224 aa3.47□□□□□ -1.85
LINC00342-201ENST00000412393 PDE6GP18545 87 aa3.47□□□□□ -1.85
LINC00342-201ENST00000412393 KRTAP10-1P60331 282 aa3.47□□□□□ -1.85
LINC00342-201ENST00000412393 CD164Q04900 197 aa3.47□□□□□ -1.85
LINC00342-201ENST00000412393 KLKP1Q107X0 134 aa3.47□□□□□ -1.85
LINC00342-201ENST00000412393 SS18Q15532 418 aa3.47□□□□□ -1.85
LINC00342-201ENST00000412393 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
LINC00342-201ENST00000412393 SMIM11BQ8TCY0 68 aa3.47□□□□□ -1.85
LINC00342-201ENST00000412393 PKIGQ9Y2B9 76 aa3.47□□□□□ -1.85
LINC00342-201ENST00000412393 ABCA13Q86UQ4 5058 aa3.46□□□□□ -1.86
LINC00342-201ENST00000412393 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.46□□□□□ -1.86
LINC00342-201ENST00000412393 TRAV7A0A075B6U4 112 aa3.46□□□□□ -1.86
LINC00342-201ENST00000412393 LOC110117498A0A087WWA1 95 aa3.46□□□□□ -1.86
LINC00342-201ENST00000412393 A0A087WZ39 114 aa3.46□□□□□ -1.86
LINC00342-201ENST00000412393 IGHV3OR16-9A0A0B4J2B5 98 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms