RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SSC5DA1L4H1 1573 aa1.89□□□□□ -2.11
HMGB1P13-201ENST00000406019 MED13LQ71F56 2210 aa1.89□□□□□ -2.11
HMGB1P13-201ENST00000406019 A0A096LNT2 108 aa1.88□□□□□ -2.11
HMGB1P13-201ENST00000406019 H3BSH0 61 aa1.88□□□□□ -2.11
HMGB1P13-201ENST00000406019 INE1O15225 51 aa1.88□□□□□ -2.11
HMGB1P13-201ENST00000406019 LINC00158P58513 81 aa1.88□□□□□ -2.11
HMGB1P13-201ENST00000406019 CNFNQ9BYD5 112 aa1.88□□□□□ -2.11
HMGB1P13-201ENST00000406019 LINC01590Q5TEZ4 76 aa1.87□□□□□ -2.11
HMGB1P13-201ENST00000406019 SMIM11BQ8TCY0 68 aa1.87□□□□□ -2.11
HMGB1P13-201ENST00000406019 NDUFA1O15239 70 aa1.86□□□□□ -2.11
HMGB1P13-201ENST00000406019 UNQ6190/PRO20217Q6UXQ8 127 aa1.86□□□□□ -2.11
HMGB1P13-201ENST00000406019 CDKN2A-AS1Q9UH64 79 aa1.86□□□□□ -2.11
HMGB1P13-201ENST00000406019 GVQW2A0A096LPI5 108 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P13-201ENST00000406019 LY6G6CO95867 125 aa1.85□□□□□ -2.11
HMGB1P13-201ENST00000406019 Q6ZRX8 168 aa1.85□□□□□ -2.11
HMGB1P13-201ENST00000406019 ABCA1O95477 2261 aa1.84□□□□□ -2.11
HMGB1P13-201ENST00000406019 DEFB131BA0A096LNP1 70 aa1.84□□□□□ -2.11
HMGB1P13-201ENST00000406019 CACNA1CQ13936 2221 aa1.84□□□□□ -2.11
HMGB1P13-201ENST00000406019 ALMS1Q8TCU4 4167 aa1.83□□□□□ -2.12
HMGB1P13-201ENST00000406019 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.83□□□□□ -2.12
HMGB1P13-201ENST00000406019 Q8IZM0 81 aa1.83□□□□□ -2.12
HMGB1P13-201ENST00000406019 BPTFQ12830 3046 aa1.83□□□□□ -2.12
HMGB1P13-201ENST00000406019 TECTAO75443 2155 aa1.82□□□□□ -2.12
HMGB1P13-201ENST00000406019 CADP27708 2225 aa1.82□□□□□ -2.12
HMGB1P13-201ENST00000406019 PLAC4Q8WY50 150 aa1.82□□□□□ -2.12
HMGB1P13-201ENST00000406019 ANGP03950 147 aaKnown RBP1.81□□□□□ -2.12
HMGB1P13-201ENST00000406019 SPTY2D1-AS1A0A0U1RR47 76 aa1.8□□□□□ -2.12
HMGB1P13-201ENST00000406019 RPL39P62891 51 aaKnown RBP1.79□□□□□ -2.12
HMGB1P13-201ENST00000406019 SPINK9Q5DT21 86 aa1.79□□□□□ -2.12
HMGB1P13-201ENST00000406019 I3L2K1 104 aa1.78□□□□□ -2.12
HMGB1P13-201ENST00000406019 MRPL33O75394 65 aaKnown RBP1.78□□□□□ -2.12
HMGB1P13-201ENST00000406019 RPL39LQ96EH5 51 aaKnown RBP1.78□□□□□ -2.12
HMGB1P13-201ENST00000406019 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.78□□□□□ -2.13
HMGB1P13-201ENST00000406019 ASXL3Q9C0F0 2248 aa1.78□□□□□ -2.13
HMGB1P13-201ENST00000406019 H0YAA0 97 aa1.77□□□□□ -2.13
HMGB1P13-201ENST00000406019 K7EQZ3 153 aa1.77□□□□□ -2.13
HMGB1P13-201ENST00000406019 RPS27P42677 84 aaKnown RBP1.77□□□□□ -2.13
HMGB1P13-201ENST00000406019 LELP1Q5T871 98 aa1.77□□□□□ -2.13
HMGB1P13-201ENST00000406019 LINC00575Q6W349 94 aa1.77□□□□□ -2.13
HMGB1P13-201ENST00000406019 DEFB119Q8N690 84 aa1.77□□□□□ -2.13
HMGB1P13-201ENST00000406019 C10orf95Q9H7T3 257 aa1.77□□□□□ -2.13
HMGB1P13-201ENST00000406019 POLR2KP53803 58 aaKnown RBP1.75□□□□□ -2.13
HMGB1P13-201ENST00000406019 LEAP2Q969E1 77 aa1.75□□□□□ -2.13
HMGB1P13-201ENST00000406019 CRCT1Q9UGL9 99 aa1.75□□□□□ -2.13
HMGB1P13-201ENST00000406019 OTOGLQ3ZCN5 2332 aa1.74□□□□□ -2.13
HMGB1P13-201ENST00000406019 KRTAP21-3Q3LHN1 58 aa1.74□□□□□ -2.13
HMGB1P13-201ENST00000406019 C10orf99Q6UWK7 81 aa1.74□□□□□ -2.13
HMGB1P13-201ENST00000406019 RP1L1Q8IWN7 2480 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P13-201ENST00000406019 CCL22O00626 93 aa1.73□□□□□ -2.13
HMGB1P13-201ENST00000406019 WFDC13Q8IUB5 93 aa1.73□□□□□ -2.13
HMGB1P13-201ENST00000406019 LYNX1G3V0Z9 82 aa1.72□□□□□ -2.13
HMGB1P13-201ENST00000406019 PIGYQ3MUY2 71 aa1.72□□□□□ -2.13
HMGB1P13-201ENST00000406019 MINOS1Q5TGZ0 78 aa1.72□□□□□ -2.13
HMGB1P13-201ENST00000406019 KNTC1P50748 2209 aa1.72□□□□□ -2.13
HMGB1P13-201ENST00000406019 CACNA1BQ00975 2339 aa1.72□□□□□ -2.13
HMGB1P13-201ENST00000406019 PTPRQQ9UMZ3 2332 aa1.72□□□□□ -2.13
HMGB1P13-201ENST00000406019 URB1O60287 2271 aaKnown RBP1.71□□□□□ -2.13
HMGB1P13-201ENST00000406019 MRPL34Q9BQ48 92 aaKnown RBP1.71□□□□□ -2.14
HMGB1P13-201ENST00000406019 CACNA1EQ15878 2313 aa1.71□□□□□ -2.14
HMGB1P13-201ENST00000406019 RPL37P61927 97 aaKnown RBP1.7□□□□□ -2.14
HMGB1P13-201ENST00000406019 WFDC10BQ8IUB3 73 aa1.7□□□□□ -2.14
HMGB1P13-201ENST00000406019 C6orf48Q9UBA6 75 aa1.7□□□□□ -2.14
HMGB1P13-201ENST00000406019 PDE4DIPQ5VU43 2346 aa1.69□□□□□ -2.14
HMGB1P13-201ENST00000406019 LYNX1P0DP58 116 aa1.69□□□□□ -2.14
HMGB1P13-201ENST00000406019 Q6ZSA8 131 aa1.69□□□□□ -2.14
HMGB1P13-201ENST00000406019 CNOT1A5YKK6 2376 aaKnown RBP1.69□□□□□ -2.14
HMGB1P13-201ENST00000406019 AHCTF1Q8WYP5 2266 aa1.68□□□□□ -2.14
HMGB1P13-201ENST00000406019 FLG2Q5D862 2391 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P13-201ENST00000406019 UBE2DNLQ8IWF7 75 aa1.68□□□□□ -2.14
HMGB1P13-201ENST00000406019 MUC6Q6W4X9 2439 aa1.67□□□□□ -2.14
HMGB1P13-201ENST00000406019 PIEZO2Q9H5I5 2752 aa1.67□□□□□ -2.14
HMGB1P13-201ENST00000406019 PRCDQ00LT1 54 aa1.66□□□□□ -2.14
HMGB1P13-201ENST00000406019 COX6A2Q02221 97 aa1.66□□□□□ -2.14
HMGB1P13-201ENST00000406019 DEFB104AQ8WTQ1 72 aa1.66□□□□□ -2.14
HMGB1P13-201ENST00000406019 KRTAP4-1Q9BYQ7 146 aa1.66□□□□□ -2.14
HMGB1P13-201ENST00000406019 IGLV5-48A0A075B6I7 105 aa1.65□□□□□ -2.15
HMGB1P13-201ENST00000406019 DEFB123Q8N688 67 aa1.65□□□□□ -2.15
HMGB1P13-201ENST00000406019 TP53AIP1Q9HCN2 124 aa1.65□□□□□ -2.15
HMGB1P13-201ENST00000406019 KAAG1Q9UBP8 84 aa1.65□□□□□ -2.15
HMGB1P13-201ENST00000406019 COL6A6A6NMZ7 2263 aa1.64□□□□□ -2.15
HMGB1P13-201ENST00000406019 DOPEY2Q9Y3R5 2298 aa1.64□□□□□ -2.15
HMGB1P13-201ENST00000406019 DEFB130BP0DP73 79 aa1.64□□□□□ -2.15
HMGB1P13-201ENST00000406019 DEFB130AP0DP74 79 aa1.64□□□□□ -2.15
HMGB1P13-201ENST00000406019 SPINK13Q1W4C9 94 aa1.63□□□□□ -2.15
HMGB1P13-201ENST00000406019 H1FX-AS1Q4G0G2 97 aa1.63□□□□□ -2.15
HMGB1P13-201ENST00000406019 PLCE1Q9P212 2302 aa1.63□□□□□ -2.15
HMGB1P13-201ENST00000406019 IGF2RP11717 2491 aa1.63□□□□□ -2.15
HMGB1P13-201ENST00000406019 FBN3Q75N90 2809 aa1.62□□□□□ -2.15
HMGB1P13-201ENST00000406019 MMP24-AS1A0A0U1RRL7 71 aa1.62□□□□□ -2.15
HMGB1P13-201ENST00000406019 A8MTW9 85 aa1.62□□□□□ -2.15
HMGB1P13-201ENST00000406019 M0QY20 66 aa1.62□□□□□ -2.15
HMGB1P13-201ENST00000406019 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P13-201ENST00000406019 JMJD1CQ15652 2540 aa1.61□□□□□ -2.15
HMGB1P13-201ENST00000406019 COX6B2Q6YFQ2 88 aa1.61□□□□□ -2.15
HMGB1P13-201ENST00000406019 REV3LO60673 3130 aa1.6□□□□□ -2.15
HMGB1P13-201ENST00000406019 KNL1Q8NG31 2342 aa1.6□□□□□ -2.15
HMGB1P13-201ENST00000406019 ASCC3Q8N3C0 2202 aaKnown RBP1.59□□□□□ -2.15
HMGB1P13-201ENST00000406019 ZDBF2Q9HCK1 2354 aa1.59□□□□□ -2.16
HMGB1P13-201ENST00000406019 USMG5Q96IX5 58 aa1.58□□□□□ -2.16
HMGB1P13-201ENST00000406019 FAM208BQ5VWN6 2430 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms