RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SSC5DA1L4H1 1573 aa1.89□□□□□ -2.11
HMGB1P13-201ENST00000406019 MED13LQ71F56 2210 aa1.89□□□□□ -2.11
HMGB1P13-201ENST00000406019 A0A096LNT2 108 aa1.88□□□□□ -2.11
HMGB1P13-201ENST00000406019 H3BSH0 61 aa1.88□□□□□ -2.11
HMGB1P13-201ENST00000406019 INE1O15225 51 aa1.88□□□□□ -2.11
HMGB1P13-201ENST00000406019 LINC00158P58513 81 aa1.88□□□□□ -2.11
HMGB1P13-201ENST00000406019 CNFNQ9BYD5 112 aa1.88□□□□□ -2.11
HMGB1P13-201ENST00000406019 LINC01590Q5TEZ4 76 aa1.87□□□□□ -2.11
HMGB1P13-201ENST00000406019 SMIM11BQ8TCY0 68 aa1.87□□□□□ -2.11
HMGB1P13-201ENST00000406019 NDUFA1O15239 70 aa1.86□□□□□ -2.11
HMGB1P13-201ENST00000406019 UNQ6190/PRO20217Q6UXQ8 127 aa1.86□□□□□ -2.11
HMGB1P13-201ENST00000406019 CDKN2A-AS1Q9UH64 79 aa1.86□□□□□ -2.11
HMGB1P13-201ENST00000406019 GVQW2A0A096LPI5 108 aaPredicted RBP1.85□□□□□ -2.11
HMGB1P13-201ENST00000406019 LY6G6CO95867 125 aa1.85□□□□□ -2.11
HMGB1P13-201ENST00000406019 Q6ZRX8 168 aa1.85□□□□□ -2.11
HMGB1P13-201ENST00000406019 ABCA1O95477 2261 aa1.84□□□□□ -2.11
HMGB1P13-201ENST00000406019 DEFB131BA0A096LNP1 70 aa1.84□□□□□ -2.11
HMGB1P13-201ENST00000406019 CACNA1CQ13936 2221 aa1.84□□□□□ -2.11
HMGB1P13-201ENST00000406019 ALMS1Q8TCU4 4167 aa1.83□□□□□ -2.12
HMGB1P13-201ENST00000406019 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.83□□□□□ -2.12
HMGB1P13-201ENST00000406019 Q8IZM0 81 aa1.83□□□□□ -2.12
HMGB1P13-201ENST00000406019 BPTFQ12830 3046 aa1.83□□□□□ -2.12
HMGB1P13-201ENST00000406019 TECTAO75443 2155 aa1.82□□□□□ -2.12
HMGB1P13-201ENST00000406019 CADP27708 2225 aa1.82□□□□□ -2.12
HMGB1P13-201ENST00000406019 PLAC4Q8WY50 150 aa1.82□□□□□ -2.12
HMGB1P13-201ENST00000406019 ANGP03950 147 aaKnown RBP1.81□□□□□ -2.12
HMGB1P13-201ENST00000406019 SPTY2D1-AS1A0A0U1RR47 76 aa1.8□□□□□ -2.12
HMGB1P13-201ENST00000406019 RPL39P62891 51 aaKnown RBP1.79□□□□□ -2.12
HMGB1P13-201ENST00000406019 SPINK9Q5DT21 86 aa1.79□□□□□ -2.12
HMGB1P13-201ENST00000406019 I3L2K1 104 aa1.78□□□□□ -2.12
HMGB1P13-201ENST00000406019 MRPL33O75394 65 aaKnown RBP1.78□□□□□ -2.12
HMGB1P13-201ENST00000406019 RPL39LQ96EH5 51 aaKnown RBP1.78□□□□□ -2.12
HMGB1P13-201ENST00000406019 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.78□□□□□ -2.13
HMGB1P13-201ENST00000406019 ASXL3Q9C0F0 2248 aa1.78□□□□□ -2.13
HMGB1P13-201ENST00000406019 H0YAA0 97 aa1.77□□□□□ -2.13
HMGB1P13-201ENST00000406019 K7EQZ3 153 aa1.77□□□□□ -2.13
HMGB1P13-201ENST00000406019 RPS27P42677 84 aaKnown RBP1.77□□□□□ -2.13
HMGB1P13-201ENST00000406019 LELP1Q5T871 98 aa1.77□□□□□ -2.13
HMGB1P13-201ENST00000406019 LINC00575Q6W349 94 aa1.77□□□□□ -2.13
HMGB1P13-201ENST00000406019 DEFB119Q8N690 84 aa1.77□□□□□ -2.13
HMGB1P13-201ENST00000406019 C10orf95Q9H7T3 257 aa1.77□□□□□ -2.13
HMGB1P13-201ENST00000406019 POLR2KP53803 58 aaKnown RBP1.75□□□□□ -2.13
HMGB1P13-201ENST00000406019 LEAP2Q969E1 77 aa1.75□□□□□ -2.13
HMGB1P13-201ENST00000406019 CRCT1Q9UGL9 99 aa1.75□□□□□ -2.13
HMGB1P13-201ENST00000406019 OTOGLQ3ZCN5 2332 aa1.74□□□□□ -2.13
HMGB1P13-201ENST00000406019 KRTAP21-3Q3LHN1 58 aa1.74□□□□□ -2.13
HMGB1P13-201ENST00000406019 C10orf99Q6UWK7 81 aa1.74□□□□□ -2.13
HMGB1P13-201ENST00000406019 RP1L1Q8IWN7 2480 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P13-201ENST00000406019 CCL22O00626 93 aa1.73□□□□□ -2.13
HMGB1P13-201ENST00000406019 WFDC13Q8IUB5 93 aa1.73□□□□□ -2.13
HMGB1P13-201ENST00000406019 LYNX1G3V0Z9 82 aa1.72□□□□□ -2.13
HMGB1P13-201ENST00000406019 PIGYQ3MUY2 71 aa1.72□□□□□ -2.13
HMGB1P13-201ENST00000406019 MINOS1Q5TGZ0 78 aa1.72□□□□□ -2.13
HMGB1P13-201ENST00000406019 KNTC1P50748 2209 aa1.72□□□□□ -2.13
HMGB1P13-201ENST00000406019 CACNA1BQ00975 2339 aa1.72□□□□□ -2.13
HMGB1P13-201ENST00000406019 PTPRQQ9UMZ3 2332 aa1.72□□□□□ -2.13
HMGB1P13-201ENST00000406019 URB1O60287 2271 aaKnown RBP1.71□□□□□ -2.13
HMGB1P13-201ENST00000406019 MRPL34Q9BQ48 92 aaKnown RBP1.71□□□□□ -2.14
HMGB1P13-201ENST00000406019 CACNA1EQ15878 2313 aa1.71□□□□□ -2.14
HMGB1P13-201ENST00000406019 RPL37P61927 97 aaKnown RBP1.7□□□□□ -2.14
HMGB1P13-201ENST00000406019 WFDC10BQ8IUB3 73 aa1.7□□□□□ -2.14
HMGB1P13-201ENST00000406019 C6orf48Q9UBA6 75 aa1.7□□□□□ -2.14
HMGB1P13-201ENST00000406019 PDE4DIPQ5VU43 2346 aa1.69□□□□□ -2.14
HMGB1P13-201ENST00000406019 LYNX1P0DP58 116 aa1.69□□□□□ -2.14
HMGB1P13-201ENST00000406019 Q6ZSA8 131 aa1.69□□□□□ -2.14
HMGB1P13-201ENST00000406019 CNOT1A5YKK6 2376 aaKnown RBP1.69□□□□□ -2.14
HMGB1P13-201ENST00000406019 AHCTF1Q8WYP5 2266 aa1.68□□□□□ -2.14
HMGB1P13-201ENST00000406019 FLG2Q5D862 2391 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P13-201ENST00000406019 UBE2DNLQ8IWF7 75 aa1.68□□□□□ -2.14
HMGB1P13-201ENST00000406019 MUC6Q6W4X9 2439 aa1.67□□□□□ -2.14
HMGB1P13-201ENST00000406019 PIEZO2Q9H5I5 2752 aa1.67□□□□□ -2.14
HMGB1P13-201ENST00000406019 PRCDQ00LT1 54 aa1.66□□□□□ -2.14
HMGB1P13-201ENST00000406019 COX6A2Q02221 97 aa1.66□□□□□ -2.14
HMGB1P13-201ENST00000406019 DEFB104AQ8WTQ1 72 aa1.66□□□□□ -2.14
HMGB1P13-201ENST00000406019 KRTAP4-1Q9BYQ7 146 aa1.66□□□□□ -2.14
HMGB1P13-201ENST00000406019 IGLV5-48A0A075B6I7 105 aa1.65□□□□□ -2.15
HMGB1P13-201ENST00000406019 DEFB123Q8N688 67 aa1.65□□□□□ -2.15
HMGB1P13-201ENST00000406019 TP53AIP1Q9HCN2 124 aa1.65□□□□□ -2.15
HMGB1P13-201ENST00000406019 KAAG1Q9UBP8 84 aa1.65□□□□□ -2.15
HMGB1P13-201ENST00000406019 COL6A6A6NMZ7 2263 aa1.64□□□□□ -2.15
HMGB1P13-201ENST00000406019 DOPEY2Q9Y3R5 2298 aa1.64□□□□□ -2.15
HMGB1P13-201ENST00000406019 DEFB130BP0DP73 79 aa1.64□□□□□ -2.15
HMGB1P13-201ENST00000406019 DEFB130AP0DP74 79 aa1.64□□□□□ -2.15
HMGB1P13-201ENST00000406019 SPINK13Q1W4C9 94 aa1.63□□□□□ -2.15
HMGB1P13-201ENST00000406019 H1FX-AS1Q4G0G2 97 aa1.63□□□□□ -2.15
HMGB1P13-201ENST00000406019 PLCE1Q9P212 2302 aa1.63□□□□□ -2.15
HMGB1P13-201ENST00000406019 IGF2RP11717 2491 aa1.63□□□□□ -2.15
HMGB1P13-201ENST00000406019 FBN3Q75N90 2809 aa1.62□□□□□ -2.15
HMGB1P13-201ENST00000406019 MMP24-AS1A0A0U1RRL7 71 aa1.62□□□□□ -2.15
HMGB1P13-201ENST00000406019 A8MTW9 85 aa1.62□□□□□ -2.15
HMGB1P13-201ENST00000406019 M0QY20 66 aa1.62□□□□□ -2.15
HMGB1P13-201ENST00000406019 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
HMGB1P13-201ENST00000406019 JMJD1CQ15652 2540 aa1.61□□□□□ -2.15
HMGB1P13-201ENST00000406019 COX6B2Q6YFQ2 88 aa1.61□□□□□ -2.15
HMGB1P13-201ENST00000406019 REV3LO60673 3130 aa1.6□□□□□ -2.15
HMGB1P13-201ENST00000406019 KNL1Q8NG31 2342 aa1.6□□□□□ -2.15
HMGB1P13-201ENST00000406019 ASCC3Q8N3C0 2202 aaKnown RBP1.59□□□□□ -2.15
HMGB1P13-201ENST00000406019 ZDBF2Q9HCK1 2354 aa1.59□□□□□ -2.16
HMGB1P13-201ENST00000406019 USMG5Q96IX5 58 aa1.58□□□□□ -2.16
HMGB1P13-201ENST00000406019 FAM208BQ5VWN6 2430 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms