RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 DNAH17Q9UFH2 4485 aa3.4□□□□□ -1.87
HMGB3P7-201ENST00000400214 TRBV20-1A0A075B6N2 111 aa3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 IGKV2D-30A0A075B6S6 120 aa3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 TRGV4A0A0C4DH28 118 aa3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 A0A1B0GUT8 65 aa3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 TRBV6-4A0A1B0GX49 114 aa3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 IGHV3-53P01767 116 aa3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 ARMS2P0C7Q2 107 aa3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 WFDC2Q14508 124 aa3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 DEFB116Q30KQ4 102 aa3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 ETDBQ3ZM63 59 aa3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 Q6ZUT4 128 aa3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 SH2D6Q7Z4S9 175 aa3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 UBE2DNLQ8IWF7 75 aa3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 C1orf64Q8NEQ6 169 aa3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 NHP2Q9NX24 153 aaKnown RBP3.39□□□□□ -1.87
HMGB3P7-201ENST00000400214 NBDYA0A0U1RRE5 68 aa3.38□□□□□ -1.87
HMGB3P7-201ENST00000400214 H3BVH4 76 aa3.38□□□□□ -1.87
HMGB3P7-201ENST00000400214 RTL8CO15255 209 aa3.38□□□□□ -1.87
HMGB3P7-201ENST00000400214 RPL28P46779 137 aaKnown RBP3.38□□□□□ -1.87
HMGB3P7-201ENST00000400214 Q5W150 140 aa3.38□□□□□ -1.87
HMGB3P7-201ENST00000400214 LYPD5Q6UWN5 251 aa3.38□□□□□ -1.87
HMGB3P7-201ENST00000400214 IFI27L1Q96BM0 104 aa3.38□□□□□ -1.87
HMGB3P7-201ENST00000400214 DNAH2Q9P225 4427 aa3.38□□□□□ -1.87
HMGB3P7-201ENST00000400214 PKHD1P08F94 4074 aa3.38□□□□□ -1.87
HMGB3P7-201ENST00000400214 FAT2Q9NYQ8 4349 aa3.38□□□□□ -1.87
HMGB3P7-201ENST00000400214 PKD1P98161 4303 aa3.37□□□□□ -1.87
HMGB3P7-201ENST00000400214 A0A087WYN8 130 aa3.37□□□□□ -1.87
HMGB3P7-201ENST00000400214 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P7-201ENST00000400214 XCL1P47992 114 aa3.37□□□□□ -1.87
HMGB3P7-201ENST00000400214 RHOHQ15669 191 aa3.37□□□□□ -1.87
HMGB3P7-201ENST00000400214 Q8NDZ9 215 aa3.37□□□□□ -1.87
HMGB3P7-201ENST00000400214 IGLV2-18A0A075B6J9 118 aa3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 TMSB15BA0A087X1C1 80 aa3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 A0A1B0GVY2 172 aa3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 M0R2N4 97 aa3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 TCL1BO95988 128 aa3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 IGKCP01834 107 aa3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 DNAH10OSP0CZ25 163 aa3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 PLNP26678 52 aa3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 FCER1GP30273 86 aa3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 C1orf134Q5TEV5 83 aa3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 CNFNQ9BYD5 112 aa3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 KRTAP1-5Q9BYS1 174 aa3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 NXT2Q9NPJ8 142 aaKnown RBP3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 KIF25-AS1Q9Y6Z4 181 aa3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 BIRC6Q9NR09 4857 aa3.36□□□□□ -1.87
HMGB3P7-201ENST00000400214 TRBV10-1A0A0K0K1A3 114 aa3.35□□□□□ -1.87
HMGB3P7-201ENST00000400214 H3BQ85 93 aa3.35□□□□□ -1.87
HMGB3P7-201ENST00000400214 ZNF861PO60384 105 aa3.35□□□□□ -1.87
HMGB3P7-201ENST00000400214 MT-ATP8P03928 68 aa3.35□□□□□ -1.87
HMGB3P7-201ENST00000400214 CRYGAP11844 174 aa3.35□□□□□ -1.87
HMGB3P7-201ENST00000400214 FUSP35637 526 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB3P7-201ENST00000400214 LINC00315P59091 139 aa3.35□□□□□ -1.87
HMGB3P7-201ENST00000400214 LELP1Q5T871 98 aa3.35□□□□□ -1.87
HMGB3P7-201ENST00000400214 C9orf153Q5TBE3 101 aa3.35□□□□□ -1.87
HMGB3P7-201ENST00000400214 C20orf78Q9BR46 151 aa3.35□□□□□ -1.87
HMGB3P7-201ENST00000400214 TRBV7-3A0A075B6L6 115 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 TRBV25-1A0A075B6N4 114 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 LOC107984156A0A0G2JMH3 177 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 MYMXA0A1B0GTQ4 84 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 TIMM17BO60830 172 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 CKS2P33552 79 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 FXYD2P54710 66 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 SS18Q15532 418 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 C14orf177Q52M58 125 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 LINC01556Q5JQF7 62 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 SPANXN1Q5VSR9 72 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 LYZL1Q6UWQ5 148 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 Q6ZRN7 208 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 WFDC10BQ8IUB3 73 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 ARL17AQ8IVW1 177 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 PRO0461Q9UI25 63 aa3.34□□□□□ -1.87
HMGB3P7-201ENST00000400214 LINC01549A6NIU2 74 aa3.33□□□□□ -1.88
HMGB3P7-201ENST00000400214 ZNF22P17026 224 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P7-201ENST00000400214 IFI27P40305 119 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P7-201ENST00000400214 UBE2D3P61077 147 aa3.33□□□□□ -1.88
HMGB3P7-201ENST00000400214 UBE2D2P62837 147 aa3.33□□□□□ -1.88
HMGB3P7-201ENST00000400214 MRPS36P82909 103 aaKnown RBP3.33□□□□□ -1.88
HMGB3P7-201ENST00000400214 FAM74A4Q5TZK3 123 aa3.33□□□□□ -1.88
HMGB3P7-201ENST00000400214 LINC00526Q96FQ7 95 aa3.33□□□□□ -1.88
HMGB3P7-201ENST00000400214 IBA57-AS1B1ANH7 110 aa3.32□□□□□ -1.88
HMGB3P7-201ENST00000400214 D6R8Y8 96 aa3.32□□□□□ -1.88
HMGB3P7-201ENST00000400214 PANO1I0J062 215 aa3.32□□□□□ -1.88
HMGB3P7-201ENST00000400214 M0QY20 66 aa3.32□□□□□ -1.88
HMGB3P7-201ENST00000400214 ACYP1P07311 99 aa3.32□□□□□ -1.88
HMGB3P7-201ENST00000400214 ZNF56Q15929 161 aa3.32□□□□□ -1.88
HMGB3P7-201ENST00000400214 KRTAP7-1Q8IUC3 87 aa3.32□□□□□ -1.88
HMGB3P7-201ENST00000400214 COPS9Q8WXC6 57 aa3.32□□□□□ -1.88
HMGB3P7-201ENST00000400214 CLEC2BQ92478 149 aa3.32□□□□□ -1.88
HMGB3P7-201ENST00000400214 RETNLBQ9BQ08 111 aa3.32□□□□□ -1.88
HMGB3P7-201ENST00000400214 DPH3P1Q9H4G8 78 aa3.32□□□□□ -1.88
HMGB3P7-201ENST00000400214 SERP1Q9Y6X1 66 aa3.32□□□□□ -1.88
HMGB3P7-201ENST00000400214 TRAV7A0A075B6U4 112 aa3.31□□□□□ -1.88
HMGB3P7-201ENST00000400214 TRBV6-8A0A0A6YYG3 113 aa3.31□□□□□ -1.88
HMGB3P7-201ENST00000400214 LINC01546A6NGU7 62 aa3.31□□□□□ -1.88
HMGB3P7-201ENST00000400214 IGLV7-43P04211 117 aa3.31□□□□□ -1.88
HMGB3P7-201ENST00000400214 CIRBPQ14011 172 aaKnown RBP3.31□□□□□ -1.88
HMGB3P7-201ENST00000400214 ATXN8Q156A1 80 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms