RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 MED13LQ71F56 2210 aa5.24□□□□□ -1.57
SPTLC3-201ENST00000399002 CREBBPQ92793 2442 aa5.23□□□□□ -1.57
SPTLC3-201ENST00000399002 ANAPC11Q9NYG5 84 aa5.23□□□□□ -1.57
SPTLC3-201ENST00000399002 GOLGB1Q14789 3259 aaKnown RBP5.22□□□□□ -1.57
SPTLC3-201ENST00000399002 MMP24-AS1A0A0U1RRL7 71 aa5.22□□□□□ -1.57
SPTLC3-201ENST00000399002 SORL1Q92673 2214 aa5.22□□□□□ -1.57
SPTLC3-201ENST00000399002 LINC00483Q53H64 154 aa5.22□□□□□ -1.57
SPTLC3-201ENST00000399002 Q8N1X5 172 aa5.22□□□□□ -1.57
SPTLC3-201ENST00000399002 DMAC1Q96GE9 116 aa5.22□□□□□ -1.57
SPTLC3-201ENST00000399002 SRCAPQ6ZRS2 3230 aa5.21□□□□□ -1.57
SPTLC3-201ENST00000399002 ZCCHC13Q8WW36 166 aaKnown RBP5.21□□□□□ -1.57
SPTLC3-201ENST00000399002 FAM208BQ5VWN6 2430 aa5.21□□□□□ -1.58
SPTLC3-201ENST00000399002 A0A1B0GU33 70 aa5.21□□□□□ -1.58
SPTLC3-201ENST00000399002 HRES1P13985 223 aa5.21□□□□□ -1.58
SPTLC3-201ENST00000399002 PRR26Q8N8Z3 221 aa5.21□□□□□ -1.58
SPTLC3-201ENST00000399002 Q6ZSA8 131 aa5.19□□□□□ -1.58
SPTLC3-201ENST00000399002 LUZP6Q538Z0 58 aa5.19□□□□□ -1.58
SPTLC3-201ENST00000399002 NOTCH3Q9UM47 2321 aa5.19□□□□□ -1.58
SPTLC3-201ENST00000399002 MUC4Q99102 2169 aa5.19□□□□□ -1.58
SPTLC3-201ENST00000399002 UTRNP46939 3433 aa5.17□□□□□ -1.58
SPTLC3-201ENST00000399002 SMR3BP02814 79 aaPredicted RBP5.17□□□□□ -1.58
SPTLC3-201ENST00000399002 A0A0D9SG42 100 aa5.17□□□□□ -1.58
SPTLC3-201ENST00000399002 S4R3F8 94 aa5.17□□□□□ -1.58
SPTLC3-201ENST00000399002 WNK1Q9H4A3 2382 aa5.17□□□□□ -1.58
SPTLC3-201ENST00000399002 NBASA2RRP1 2371 aa5.16□□□□□ -1.58
SPTLC3-201ENST00000399002 Q5XG85 94 aa5.16□□□□□ -1.58
SPTLC3-201ENST00000399002 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.16□□□□□ -1.58
SPTLC3-201ENST00000399002 Q8N9P0 234 aaPredicted RBP5.15□□□□□ -1.58
SPTLC3-201ENST00000399002 LINC00472Q9H8W2 130 aa5.15□□□□□ -1.59
SPTLC3-201ENST00000399002 ASB16-AS1Q495Z4 193 aa5.15□□□□□ -1.59
SPTLC3-201ENST00000399002 TNP2Q05952 138 aa5.14□□□□□ -1.59
SPTLC3-201ENST00000399002 NAV2Q8IVL1 2488 aa5.13□□□□□ -1.59
SPTLC3-201ENST00000399002 Q5W150 140 aa5.13□□□□□ -1.59
SPTLC3-201ENST00000399002 LINC01554Q52M75 96 aa5.12□□□□□ -1.59
SPTLC3-201ENST00000399002 CSAG1Q6PB30 78 aa5.12□□□□□ -1.59
SPTLC3-201ENST00000399002 Q5VV11 94 aa5.1□□□□□ -1.59
SPTLC3-201ENST00000399002 CAMK2N1Q7Z7J9 78 aa5.09□□□□□ -1.59
SPTLC3-201ENST00000399002 CSPG4Q6UVK1 2322 aa5.09□□□□□ -1.6
SPTLC3-201ENST00000399002 KRTAP26-1Q6PEX3 210 aa5.08□□□□□ -1.6
SPTLC3-201ENST00000399002 FP248Q71RG6 208 aaPredicted RBP5.08□□□□□ -1.6
SPTLC3-201ENST00000399002 Q8NDZ9 215 aa5.08□□□□□ -1.6
SPTLC3-201ENST00000399002 Q6ZR54 194 aa5.07□□□□□ -1.6
SPTLC3-201ENST00000399002 ACACBO00763 2458 aa5.06□□□□□ -1.6
SPTLC3-201ENST00000399002 CUL9Q8IWT3 2517 aa5.05□□□□□ -1.6
SPTLC3-201ENST00000399002 SEC61BP60468 96 aaKnown RBP5.04□□□□□ -1.6
SPTLC3-201ENST00000399002 HIVEP3Q5T1R4 2406 aa5.04□□□□□ -1.6
SPTLC3-201ENST00000399002 ROMO1P60602 79 aa5.03□□□□□ -1.6
SPTLC3-201ENST00000399002 ATRXP46100 2492 aa5.02□□□□□ -1.61
SPTLC3-201ENST00000399002 H1FX-AS1Q4G0G2 97 aa5.02□□□□□ -1.61
SPTLC3-201ENST00000399002 RPS29P62273 56 aaKnown RBP5.01□□□□□ -1.61
SPTLC3-201ENST00000399002 SPINK7P58062 85 aa5.01□□□□□ -1.61
SPTLC3-201ENST00000399002 A0A0A0MQY5 61 aa5.01□□□□□ -1.61
SPTLC3-201ENST00000399002 CYSTM1Q9H1C7 97 aa5□□□□□ -1.61
SPTLC3-201ENST00000399002 RPL37P61927 97 aaKnown RBP5□□□□□ -1.61
SPTLC3-201ENST00000399002 KRTAP4-16G5E9R7 235 aaPredicted RBP5□□□□□ -1.61
SPTLC3-201ENST00000399002 SPG11Q96JI7 2443 aa4.99□□□□□ -1.61
SPTLC3-201ENST00000399002 KRTAP29-1A8MX34 341 aaPredicted RBP4.98□□□□□ -1.61
SPTLC3-201ENST00000399002 R4GN34 69 aa4.96□□□□□ -1.61
SPTLC3-201ENST00000399002 OXTP01178 125 aa4.96□□□□□ -1.62
SPTLC3-201ENST00000399002 M0R2T5 61 aa4.95□□□□□ -1.62
SPTLC3-201ENST00000399002 LCE6AA0A183 80 aa4.95□□□□□ -1.62
SPTLC3-201ENST00000399002 ABCA2Q9BZC7 2435 aa4.94□□□□□ -1.62
SPTLC3-201ENST00000399002 Q5VSD8 79 aa4.94□□□□□ -1.62
SPTLC3-201ENST00000399002 KRTAP1-5Q9BYS1 174 aa4.94□□□□□ -1.62
SPTLC3-201ENST00000399002 CR1P17927 2039 aa4.93□□□□□ -1.62
SPTLC3-201ENST00000399002 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
SPTLC3-201ENST00000399002 PTPN13Q12923 2485 aa4.92□□□□□ -1.62
SPTLC3-201ENST00000399002 IGF2RP11717 2491 aa4.91□□□□□ -1.62
SPTLC3-201ENST00000399002 SPATA8Q6RVD6 105 aa4.91□□□□□ -1.62
SPTLC3-201ENST00000399002 KRTAP10-1P60331 282 aa4.91□□□□□ -1.62
SPTLC3-201ENST00000399002 TTC28Q96AY4 2481 aa4.9□□□□□ -1.63
SPTLC3-201ENST00000399002 A0A087X002 238 aa4.88□□□□□ -1.63
SPTLC3-201ENST00000399002 LRRK2Q5S007 2527 aa4.88□□□□□ -1.63
SPTLC3-201ENST00000399002 M0QZ58 72 aa4.87□□□□□ -1.63
SPTLC3-201ENST00000399002 H3BS24 57 aa4.87□□□□□ -1.63
SPTLC3-201ENST00000399002 PCNTO95613 3336 aa4.87□□□□□ -1.63
SPTLC3-201ENST00000399002 PLAC4Q8WY50 150 aa4.86□□□□□ -1.63
SPTLC3-201ENST00000399002 ADM2Q7Z4H4 148 aa4.86□□□□□ -1.63
SPTLC3-201ENST00000399002 KRTAP10-2P60368 255 aa4.85□□□□□ -1.63
SPTLC3-201ENST00000399002 PANO1I0J062 215 aa4.85□□□□□ -1.63
SPTLC3-201ENST00000399002 C2CD3Q4AC94 2353 aa4.84□□□□□ -1.63
SPTLC3-201ENST00000399002 NCOR2Q9Y618 2525 aa4.84□□□□□ -1.63
SPTLC3-201ENST00000399002 ANKRD17O75179 2603 aaKnown RBP4.83□□□□□ -1.64
SPTLC3-201ENST00000399002 PIEZO2Q9H5I5 2752 aa4.83□□□□□ -1.64
SPTLC3-201ENST00000399002 CEP350Q5VT06 3117 aa4.82□□□□□ -1.64
SPTLC3-201ENST00000399002 DOPEY1Q5JWR5 2465 aa4.82□□□□□ -1.64
SPTLC3-201ENST00000399002 TLN1Q9Y490 2541 aaKnown RBP4.82□□□□□ -1.64
SPTLC3-201ENST00000399002 A6NN06 94 aa4.81□□□□□ -1.64
SPTLC3-201ENST00000399002 CCDC168Q8NDH2 2452 aa4.81□□□□□ -1.64
SPTLC3-201ENST00000399002 CENPFP49454 3210 aa4.8□□□□□ -1.64
SPTLC3-201ENST00000399002 BDP1A6H8Y1 2624 aa4.8□□□□□ -1.64
SPTLC3-201ENST00000399002 HTTP42858 3142 aa4.79□□□□□ -1.64
SPTLC3-201ENST00000399002 KRTAP25-1Q3LHN0 102 aa4.79□□□□□ -1.64
SPTLC3-201ENST00000399002 KRTAP13-1Q8IUC0 172 aa4.79□□□□□ -1.64
SPTLC3-201ENST00000399002 Q6ZRN7 208 aaPredicted RBP4.78□□□□□ -1.64
SPTLC3-201ENST00000399002 SONP18583 2426 aaKnown RBP4.78□□□□□ -1.64
SPTLC3-201ENST00000399002 BRCA2P51587 3418 aa4.77□□□□□ -1.65
SPTLC3-201ENST00000399002 CACNA1AO00555 2505 aa4.76□□□□□ -1.65
SPTLC3-201ENST00000399002 NOTCH2NLQ7Z3S9 236 aa4.76□□□□□ -1.65
SPTLC3-201ENST00000399002 NOTCH2Q04721 2471 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 521.4 ms