RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 A0A087WXM4 84 aa2.29□□□□□ -2.04
GABPB1-204ENST00000396464 ACYP2P14621 99 aa2.29□□□□□ -2.04
GABPB1-204ENST00000396464 COX6B1P14854 86 aa2.29□□□□□ -2.04
GABPB1-204ENST00000396464 GCHFRP30047 84 aa2.29□□□□□ -2.04
GABPB1-204ENST00000396464 RPS27P42677 84 aaKnown RBP2.29□□□□□ -2.04
GABPB1-204ENST00000396464 SNRPGP62308 76 aaKnown RBP2.29□□□□□ -2.04
GABPB1-204ENST00000396464 LINC00472Q9H8W2 130 aa2.29□□□□□ -2.04
GABPB1-204ENST00000396464 ZZEF1O43149 2961 aa2.29□□□□□ -2.04
GABPB1-204ENST00000396464 MGAQ8IWI9 3026 aa2.29□□□□□ -2.04
GABPB1-204ENST00000396464 SPENQ96T58 3664 aaKnown RBP2.29□□□□□ -2.04
GABPB1-204ENST00000396464 CNOT1A5YKK6 2376 aaKnown RBP2.29□□□□□ -2.04
GABPB1-204ENST00000396464 URB1O60287 2271 aaKnown RBP2.28□□□□□ -2.04
GABPB1-204ENST00000396464 COX8AP10176 69 aa2.28□□□□□ -2.04
GABPB1-204ENST00000396464 FXYD6P3P58550 94 aa2.28□□□□□ -2.04
GABPB1-204ENST00000396464 ANKRD11Q6UB99 2663 aaPredicted RBP2.28□□□□□ -2.04
GABPB1-204ENST00000396464 MED13LQ71F56 2210 aa2.28□□□□□ -2.04
GABPB1-204ENST00000396464 SMIM4Q8WVI0 70 aa2.28□□□□□ -2.04
GABPB1-204ENST00000396464 PLAC8Q9NZF1 115 aa2.28□□□□□ -2.04
GABPB1-204ENST00000396464 IGF2RP11717 2491 aa2.28□□□□□ -2.04
GABPB1-204ENST00000396464 PRRC2CQ9Y520 2896 aaKnown RBP2.27□□□□□ -2.05
GABPB1-204ENST00000396464 HILPDAQ9Y5L2 63 aa2.27□□□□□ -2.05
GABPB1-204ENST00000396464 DNAJC13O75165 2243 aa2.27□□□□□ -2.05
GABPB1-204ENST00000396464 NCOA6Q14686 2063 aaPredicted RBP2.27□□□□□ -2.05
GABPB1-204ENST00000396464 CHD8Q9HCK8 2581 aa2.26□□□□□ -2.05
GABPB1-204ENST00000396464 SFTA3P0C7M3 94 aa2.26□□□□□ -2.05
GABPB1-204ENST00000396464 COX17Q14061 63 aa2.26□□□□□ -2.05
GABPB1-204ENST00000396464 CACNA1AO00555 2505 aa2.26□□□□□ -2.05
GABPB1-204ENST00000396464 KALRNO60229 2985 aa2.26□□□□□ -2.05
GABPB1-204ENST00000396464 SPTBN2O15020 2390 aa2.26□□□□□ -2.05
GABPB1-204ENST00000396464 ACACAQ13085 2346 aa2.26□□□□□ -2.05
GABPB1-204ENST00000396464 AHCTF1Q8WYP5 2266 aa2.26□□□□□ -2.05
GABPB1-204ENST00000396464 PIEZO2Q9H5I5 2752 aa2.26□□□□□ -2.05
GABPB1-204ENST00000396464 PIEZO1Q92508 2521 aa2.26□□□□□ -2.05
GABPB1-204ENST00000396464 NCOR2Q9Y618 2525 aa2.26□□□□□ -2.05
GABPB1-204ENST00000396464 APC2O95996 2303 aa2.26□□□□□ -2.05
GABPB1-204ENST00000396464 IFI27P40305 119 aaPredicted RBP2.25□□□□□ -2.05
GABPB1-204ENST00000396464 LINC01590Q5TEZ4 76 aa2.25□□□□□ -2.05
GABPB1-204ENST00000396464 MAP1BP46821 2468 aaKnown RBP2.25□□□□□ -2.05
GABPB1-204ENST00000396464 KNTC1P50748 2209 aa2.25□□□□□ -2.05
GABPB1-204ENST00000396464 PTPRQQ9UMZ3 2332 aa2.25□□□□□ -2.05
GABPB1-204ENST00000396464 TRBV7-4A0A0J9YYF1 115 aa2.25□□□□□ -2.05
GABPB1-204ENST00000396464 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
GABPB1-204ENST00000396464 SPINK7P58062 85 aa2.25□□□□□ -2.05
GABPB1-204ENST00000396464 SPATA8Q6RVD6 105 aa2.25□□□□□ -2.05
GABPB1-204ENST00000396464 C10orf99Q6UWK7 81 aa2.25□□□□□ -2.05
GABPB1-204ENST00000396464 BSNQ9UPA5 3926 aa2.24□□□□□ -2.05
GABPB1-204ENST00000396464 CACNA1GO43497 2377 aa2.24□□□□□ -2.05
GABPB1-204ENST00000396464 USP24Q9UPU5 2620 aa2.24□□□□□ -2.05
GABPB1-204ENST00000396464 IGSF10Q6WRI0 2623 aa2.24□□□□□ -2.05
GABPB1-204ENST00000396464 TRBV30A0A0K0K1B3 111 aa2.24□□□□□ -2.05
GABPB1-204ENST00000396464 H3BVH4 76 aa2.24□□□□□ -2.05
GABPB1-204ENST00000396464 PCOTHQ58A44 107 aa2.24□□□□□ -2.05
GABPB1-204ENST00000396464 ATP5EP2Q5VTU8 51 aa2.24□□□□□ -2.05
GABPB1-204ENST00000396464 TMEM263Q8WUH6 116 aaKnown RBP2.24□□□□□ -2.05
GABPB1-204ENST00000396464 PKD1L2Q7Z442 2459 aa2.24□□□□□ -2.05
GABPB1-204ENST00000396464 H0Y9P7 68 aa2.23□□□□□ -2.05
GABPB1-204ENST00000396464 TFF3Q07654 80 aa2.23□□□□□ -2.05
GABPB1-204ENST00000396464 DEFB108BQ8NET1 73 aa2.23□□□□□ -2.05
GABPB1-204ENST00000396464 CNTRLQ7Z7A1 2325 aa2.23□□□□□ -2.05
GABPB1-204ENST00000396464 DEFB108AA8MXU0 73 aa2.22□□□□□ -2.05
GABPB1-204ENST00000396464 C3orf79P0CE67 100 aa2.22□□□□□ -2.05
GABPB1-204ENST00000396464 ABRACLQ9P1F3 81 aa2.22□□□□□ -2.05
GABPB1-204ENST00000396464 KMT2BQ9UMN6 2715 aaPredicted RBP2.22□□□□□ -2.05
GABPB1-204ENST00000396464 LRBAP50851 2863 aa2.22□□□□□ -2.05
GABPB1-204ENST00000396464 CACNA1BQ00975 2339 aa2.22□□□□□ -2.05
GABPB1-204ENST00000396464 ACACBO00763 2458 aa2.22□□□□□ -2.05
GABPB1-204ENST00000396464 UTP20O75691 2785 aaKnown RBP2.22□□□□□ -2.05
GABPB1-204ENST00000396464 UBR5O95071 2799 aaPredicted RBP2.21□□□□□ -2.06
GABPB1-204ENST00000396464 COL6A6A6NMZ7 2263 aa2.21□□□□□ -2.06
GABPB1-204ENST00000396464 ABCA1O95477 2261 aa2.21□□□□□ -2.06
GABPB1-204ENST00000396464 A0A096LNT2 108 aa2.21□□□□□ -2.06
GABPB1-204ENST00000396464 A0A1B0GUT8 65 aa2.21□□□□□ -2.06
GABPB1-204ENST00000396464 LYNX1G3V0Z9 82 aa2.21□□□□□ -2.06
GABPB1-204ENST00000396464 LYNX1P0DP58 116 aa2.21□□□□□ -2.06
GABPB1-204ENST00000396464 PIGYQ3MUY2 71 aa2.21□□□□□ -2.06
GABPB1-204ENST00000396464 C10orf113Q5VZT2 155 aa2.21□□□□□ -2.06
GABPB1-204ENST00000396464 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.21□□□□□ -2.06
GABPB1-204ENST00000396464 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
GABPB1-204ENST00000396464 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
GABPB1-204ENST00000396464 TENM4Q6N022 2769 aa2.21□□□□□ -2.06
GABPB1-204ENST00000396464 SMG1Q96Q15 3661 aaKnown RBP2.21□□□□□ -2.06
GABPB1-204ENST00000396464 RELNP78509 3460 aa2.2□□□□□ -2.06
GABPB1-204ENST00000396464 NCR3O14931 201 aa2.2□□□□□ -2.06
GABPB1-204ENST00000396464 Q6ZRX8 168 aa2.2□□□□□ -2.06
GABPB1-204ENST00000396464 CACNA1CQ13936 2221 aa2.2□□□□□ -2.06
GABPB1-204ENST00000396464 COL12A1Q99715 3063 aa2.2□□□□□ -2.06
GABPB1-204ENST00000396464 ADGRG4Q8IZF6 3080 aa2.19□□□□□ -2.06
GABPB1-204ENST00000396464 PIN1P1O15428 100 aa2.19□□□□□ -2.06
GABPB1-204ENST00000396464 KRTAP12-1P59990 96 aa2.19□□□□□ -2.06
GABPB1-204ENST00000396464 ARHGAP5-AS1Q96IT6 56 aa2.19□□□□□ -2.06
GABPB1-204ENST00000396464 TLN1Q9Y490 2541 aaKnown RBP2.19□□□□□ -2.06
GABPB1-204ENST00000396464 CRYBG3Q68DQ2 2970 aa2.19□□□□□ -2.06
GABPB1-204ENST00000396464 GCN1Q92616 2671 aaKnown RBP2.19□□□□□ -2.06
GABPB1-204ENST00000396464 GVQW2A0A096LPI5 108 aaPredicted RBP2.18□□□□□ -2.06
GABPB1-204ENST00000396464 TOMM5Q8N4H5 51 aa2.18□□□□□ -2.06
GABPB1-204ENST00000396464 SMIM11BQ8TCY0 68 aa2.18□□□□□ -2.06
GABPB1-204ENST00000396464 GNG13Q9P2W3 67 aa2.18□□□□□ -2.06
GABPB1-204ENST00000396464 HRNRQ86YZ3 2850 aaPredicted RBP2.18□□□□□ -2.06
GABPB1-204ENST00000396464 CFAP46Q8IYW2 2715 aa2.18□□□□□ -2.06
GABPB1-204ENST00000396464 FAM208BQ5VWN6 2430 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms