RNA–Protein interactions for RNA: ENST00000393410.5

MDM2-208, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-208ENST00000393410 UBR3Q6ZT12 1888 aa-0.34□□□□□ -2.46
MDM2-208ENST00000393410 USP9YO00507 2555 aaPredicted RBP-0.34□□□□□ -2.46
MDM2-208ENST00000393410 SACSQ9NZJ4 4579 aa-0.35□□□□□ -2.46
MDM2-208ENST00000393410 CMYA5Q8N3K9 4069 aa-0.35□□□□□ -2.47
MDM2-208ENST00000393410 NF1P21359 2839 aa-0.35□□□□□ -2.47
MDM2-208ENST00000393410 LAMA1P25391 3075 aa-0.35□□□□□ -2.47
MDM2-208ENST00000393410 MGAM2Q2M2H8 2515 aa-0.35□□□□□ -2.47
MDM2-208ENST00000393410 CPSF4LA6NMK7 179 aaKnown RBP-0.35□□□□□ -2.47
MDM2-208ENST00000393410 SPRR2BP35325 72 aa-0.35□□□□□ -2.47
MDM2-208ENST00000393410 COL5A1-AS1Q5SY13 56 aa-0.35□□□□□ -2.47
MDM2-208ENST00000393410 VAMP8Q9BV40 100 aa-0.35□□□□□ -2.47
MDM2-208ENST00000393410 USP9XQ93008 2570 aaPredicted RBP-0.35□□□□□ -2.47
MDM2-208ENST00000393410 PPLO60437 1756 aa-0.35□□□□□ -2.47
MDM2-208ENST00000393410 SVEP1Q4LDE5 3571 aa-0.35□□□□□ -2.47
MDM2-208ENST00000393410 POLR1AO95602 1720 aaPredicted RBP-0.35□□□□□ -2.47
MDM2-208ENST00000393410 WDR87Q6ZQQ6 2873 aa-0.35□□□□□ -2.47
MDM2-208ENST00000393410 MYO18BQ8IUG5 2567 aa-0.36□□□□□ -2.47
MDM2-208ENST00000393410 NIPBLQ6KC79 2804 aaeCLIP-0.36□□□□□ -2.47
MDM2-208ENST00000393410 NBEAL1Q6ZS30 2694 aa-0.36□□□□□ -2.47
MDM2-208ENST00000393410 COL6A5A8TX70 2615 aa-0.36□□□□□ -2.47
MDM2-208ENST00000393410 NBPF19A0A087WUL8 3843 aa-0.36□□□□□ -2.47
MDM2-208ENST00000393410 DEFB112Q30KQ8 113 aa-0.36□□□□□ -2.47
MDM2-208ENST00000393410 FANCAO15360 1455 aa-0.36□□□□□ -2.47
MDM2-208ENST00000393410 IQSEC2Q5JU85 1478 aa-0.36□□□□□ -2.47
MDM2-208ENST00000393410 FASNP49327 2511 aaKnown RBP-0.36□□□□□ -2.47
MDM2-208ENST00000393410 PCNX1Q96RV3 2341 aa-0.37□□□□□ -2.47
MDM2-208ENST00000393410 C4AP0C0L4 1744 aa-0.37□□□□□ -2.47
MDM2-208ENST00000393410 C4BP0C0L5 1744 aa-0.37□□□□□ -2.47
MDM2-208ENST00000393410 GNGT1P63211 74 aa-0.37□□□□□ -2.47
MDM2-208ENST00000393410 CCNB3Q8WWL7 1395 aa-0.37□□□□□ -2.47
MDM2-208ENST00000393410 EYSQ5T1H1 3165 aa-0.37□□□□□ -2.47
MDM2-208ENST00000393410 LTN1O94822 1766 aa-0.37□□□□□ -2.47
MDM2-208ENST00000393410 ABCC2Q92887 1545 aa-0.38□□□□□ -2.47
MDM2-208ENST00000393410 VPS13BQ7Z7G8 4022 aa-0.38□□□□□ -2.47
MDM2-208ENST00000393410 DOT1LQ8TEK3 1739 aa-0.38□□□□□ -2.47
MDM2-208ENST00000393410 LINC00032P0C843 101 aa-0.38□□□□□ -2.47
MDM2-208ENST00000393410 IGLC2P0DOY2 106 aa-0.38□□□□□ -2.47
MDM2-208ENST00000393410 IGLC3P0DOY3 106 aa-0.38□□□□□ -2.47
MDM2-208ENST00000393410 PKIAP61925 76 aa-0.38□□□□□ -2.47
MDM2-208ENST00000393410 ETDBQ3ZM63 59 aa-0.38□□□□□ -2.47
MDM2-208ENST00000393410 USMG5Q96IX5 58 aa-0.38□□□□□ -2.47
MDM2-208ENST00000393410 MYO15AQ9UKN7 3530 aa-0.38□□□□□ -2.47
MDM2-208ENST00000393410 EPRSP07814 1512 aaKnown RBP-0.38□□□□□ -2.47
MDM2-208ENST00000393410 NEXMIFQ5QGS0 1516 aa-0.38□□□□□ -2.47
MDM2-208ENST00000393410 SPENQ96T58 3664 aaKnown RBP-0.39□□□□□ -2.47
MDM2-208ENST00000393410 ATP10BO94823 1461 aa-0.39□□□□□ -2.47
MDM2-208ENST00000393410 S100A8P05109 93 aa-0.39□□□□□ -2.47
MDM2-208ENST00000393410 KRTAP19-6Q3LI70 58 aa-0.39□□□□□ -2.47
MDM2-208ENST00000393410 TIAM2Q8IVF5 1701 aa-0.39□□□□□ -2.47
MDM2-208ENST00000393410 FAM186AA6NE01 2351 aa-0.39□□□□□ -2.47
MDM2-208ENST00000393410 DNAH17Q9UFH2 4485 aa-0.39□□□□□ -2.47
MDM2-208ENST00000393410 TROQ12816 1431 aaPredicted RBP-0.39□□□□□ -2.47
MDM2-208ENST00000393410 CEP162Q5TB80 1403 aa-0.39□□□□□ -2.47
MDM2-208ENST00000393410 SCN11AQ9UI33 1791 aa-0.4□□□□□ -2.47
MDM2-208ENST00000393410 SMG1Q96Q15 3661 aaKnown RBP-0.4□□□□□ -2.47
MDM2-208ENST00000393410 ITPR3Q14573 2671 aa-0.4□□□□□ -2.47
MDM2-208ENST00000393410 PREX1Q8TCU6 1659 aa-0.4□□□□□ -2.47
MDM2-208ENST00000393410 TTC37Q6PGP7 1564 aa-0.4□□□□□ -2.47
MDM2-208ENST00000393410 HTTP42858 3142 aa-0.4□□□□□ -2.47
MDM2-208ENST00000393410 RELNP78509 3460 aa-0.4□□□□□ -2.47
MDM2-208ENST00000393410 UQCRHLA0A096LP55 91 aa-0.4□□□□□ -2.47
MDM2-208ENST00000393410 LOC730098B7Z3J9 87 aa-0.4□□□□□ -2.47
MDM2-208ENST00000393410 M0R2T5 61 aa-0.4□□□□□ -2.47
MDM2-208ENST00000393410 LEPROTL1O95214 131 aa-0.4□□□□□ -2.47
MDM2-208ENST00000393410 COX8AP10176 69 aa-0.4□□□□□ -2.47
MDM2-208ENST00000393410 MRPL34Q9BQ48 92 aaKnown RBP-0.4□□□□□ -2.47
MDM2-208ENST00000393410 UBE2D4Q9Y2X8 147 aa-0.4□□□□□ -2.47
MDM2-208ENST00000393410 MXRA5Q9NR99 2828 aa-0.41□□□□□ -2.47
MDM2-208ENST00000393410 ZFHX4Q86UP3 3567 aa-0.41□□□□□ -2.47
MDM2-208ENST00000393410 CSMD1Q96PZ7 3565 aa-0.41□□□□□ -2.47
MDM2-208ENST00000393410 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.41□□□□□ -2.47
MDM2-208ENST00000393410 CCDC168Q8NDH2 2452 aa-0.41□□□□□ -2.47
MDM2-208ENST00000393410 CSMD2Q7Z408 3487 aa-0.41□□□□□ -2.47
MDM2-208ENST00000393410 DNAH10Q8IVF4 4471 aa-0.41□□□□□ -2.48
MDM2-208ENST00000393410 SRCAPQ6ZRS2 3230 aa-0.41□□□□□ -2.48
MDM2-208ENST00000393410 PDE4DIPQ5VU43 2346 aa-0.41□□□□□ -2.48
MDM2-208ENST00000393410 DNAH9Q9NYC9 4486 aa-0.41□□□□□ -2.48
MDM2-208ENST00000393410 ANKRD11Q6UB99 2663 aaPredicted RBP-0.41□□□□□ -2.48
MDM2-208ENST00000393410 LRRC7Q96NW7 1537 aa-0.42□□□□□ -2.48
MDM2-208ENST00000393410 DNAH8Q96JB1 4490 aa-0.42□□□□□ -2.48
MDM2-208ENST00000393410 DNAH11Q96DT5 4516 aa-0.42□□□□□ -2.48
MDM2-208ENST00000393410 D6R8Y8 96 aa-0.42□□□□□ -2.48
MDM2-208ENST00000393410 SPINK4O60575 86 aa-0.42□□□□□ -2.48
MDM2-208ENST00000393410 SPRR2EP22531 72 aa-0.42□□□□□ -2.48
MDM2-208ENST00000393410 KRTAP6-2Q3LI66 62 aa-0.42□□□□□ -2.48
MDM2-208ENST00000393410 MUSTN1Q8IVN3 82 aa-0.42□□□□□ -2.48
MDM2-208ENST00000393410 TRRAPQ9Y4A5 3859 aa-0.42□□□□□ -2.48
MDM2-208ENST00000393410 PRRC2CQ9Y520 2896 aaKnown RBP-0.42□□□□□ -2.48
MDM2-208ENST00000393410 AKAP9Q99996 3911 aa-0.42□□□□□ -2.48
MDM2-208ENST00000393410 ITPR1Q14643 2758 aa-0.42□□□□□ -2.48
MDM2-208ENST00000393410 MAGI2Q86UL8 1455 aa-0.42□□□□□ -2.48
MDM2-208ENST00000393410 USP32Q8NFA0 1604 aa-0.42□□□□□ -2.48
MDM2-208ENST00000393410 TEX15Q9BXT5 2789 aa-0.43□□□□□ -2.48
MDM2-208ENST00000393410 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.43□□□□□ -2.48
MDM2-208ENST00000393410 I3L3M4 83 aa-0.43□□□□□ -2.48
MDM2-208ENST00000393410 ACACBO00763 2458 aa-0.43□□□□□ -2.48
MDM2-208ENST00000393410 CHD7Q9P2D1 2997 aa-0.43□□□□□ -2.48
MDM2-208ENST00000393410 A0A0C4DFX4 3053 aa-0.44□□□□□ -2.48
MDM2-208ENST00000393410 SPRR2AP35326 72 aa-0.44□□□□□ -2.48
MDM2-208ENST00000393410 ZNF720Q7Z2F6 126 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms