RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 D6R8Y8 96 aa-1.62□□□□□ -2.67
RNU6-550P-201ENST00000391057 HMGN3Q15651 99 aa-1.62□□□□□ -2.67
RNU6-550P-201ENST00000391057 MUSTN1Q8IVN3 82 aa-1.62□□□□□ -2.67
RNU6-550P-201ENST00000391057 PRDM15P57071 1507 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-550P-201ENST00000391057 C9orf92A6NGG3 77 aa-1.63□□□□□ -2.67
RNU6-550P-201ENST00000391057 PMCHL2Q9BQD1 86 aa-1.63□□□□□ -2.67
RNU6-550P-201ENST00000391057 RGPD2P0DJD1 1756 aa-1.63□□□□□ -2.67
RNU6-550P-201ENST00000391057 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.64□□□□□ -2.67
RNU6-550P-201ENST00000391057 LEPROTL1O95214 131 aa-1.64□□□□□ -2.67
RNU6-550P-201ENST00000391057 COX6B2Q6YFQ2 88 aa-1.64□□□□□ -2.67
RNU6-550P-201ENST00000391057 SERP2Q8N6R1 65 aa-1.64□□□□□ -2.67
RNU6-550P-201ENST00000391057 AKAP9Q99996 3911 aa-1.64□□□□□ -2.67
RNU6-550P-201ENST00000391057 TEX15Q9BXT5 2789 aa-1.64□□□□□ -2.67
RNU6-550P-201ENST00000391057 C20orf202A1L168 122 aa-1.65□□□□□ -2.67
RNU6-550P-201ENST00000391057 ETDBQ3ZM63 59 aa-1.65□□□□□ -2.67
RNU6-550P-201ENST00000391057 NRXN1Q9ULB1 1477 aa-1.65□□□□□ -2.67
RNU6-550P-201ENST00000391057 LINC00587B1AMM8 73 aa-1.66□□□□□ -2.68
RNU6-550P-201ENST00000391057 ATOX1O00244 68 aa-1.66□□□□□ -2.68
RNU6-550P-201ENST00000391057 NDUFA3O95167 84 aa-1.66□□□□□ -2.68
RNU6-550P-201ENST00000391057 ZNF720Q7Z2F6 126 aa-1.66□□□□□ -2.68
RNU6-550P-201ENST00000391057 DNAH9Q9NYC9 4486 aa-1.66□□□□□ -2.68
RNU6-550P-201ENST00000391057 PDE4DIPQ5VU43 2346 aa-1.66□□□□□ -2.68
RNU6-550P-201ENST00000391057 FAM135AQ9P2D6 1515 aa-1.66□□□□□ -2.68
RNU6-550P-201ENST00000391057 CMYA5Q8N3K9 4069 aa-1.66□□□□□ -2.68
RNU6-550P-201ENST00000391057 MAGI2Q86UL8 1455 aa-1.67□□□□□ -2.68
RNU6-550P-201ENST00000391057 COX7BP24311 80 aa-1.67□□□□□ -2.68
RNU6-550P-201ENST00000391057 COL6A5A8TX70 2615 aa-1.67□□□□□ -2.68
RNU6-550P-201ENST00000391057 VPS13BQ7Z7G8 4022 aa-1.68□□□□□ -2.68
RNU6-550P-201ENST00000391057 ANKRD36BQ8N2N9 1353 aa-1.68□□□□□ -2.68
RNU6-550P-201ENST00000391057 UBR3Q6ZT12 1888 aa-1.68□□□□□ -2.68
RNU6-550P-201ENST00000391057 F8WEM9 126 aa-1.68□□□□□ -2.68
RNU6-550P-201ENST00000391057 MT-ATP8P03928 68 aa-1.68□□□□□ -2.68
RNU6-550P-201ENST00000391057 RIF1Q5UIP0 2472 aaKnown RBP-1.68□□□□□ -2.68
RNU6-550P-201ENST00000391057 DEFA5Q01523 94 aa-1.69□□□□□ -2.68
RNU6-550P-201ENST00000391057 ANKRD50Q9ULJ7 1429 aa-1.69□□□□□ -2.68
RNU6-550P-201ENST00000391057 DYNC1H1Q14204 4646 aaKnown RBP-1.69□□□□□ -2.68
RNU6-550P-201ENST00000391057 CCDC168Q8NDH2 2452 aa-1.69□□□□□ -2.68
RNU6-550P-201ENST00000391057 TRANK1O15050 2925 aa-1.7□□□□□ -2.68
RNU6-550P-201ENST00000391057 PREX1Q8TCU6 1659 aa-1.7□□□□□ -2.68
RNU6-550P-201ENST00000391057 DNAH7Q8WXX0 4024 aa-1.7□□□□□ -2.68
RNU6-550P-201ENST00000391057 RPL38P63173 70 aaKnown RBP-1.7□□□□□ -2.68
RNU6-550P-201ENST00000391057 ZFYVE16Q7Z3T8 1539 aa-1.71□□□□□ -2.68
RNU6-550P-201ENST00000391057 LRRK2Q5S007 2527 aa-1.71□□□□□ -2.68
RNU6-550P-201ENST00000391057 UQCRHLA0A096LP55 91 aa-1.71□□□□□ -2.68
RNU6-550P-201ENST00000391057 COL5A1-AS1Q5SY13 56 aa-1.71□□□□□ -2.68
RNU6-550P-201ENST00000391057 UBE2D4Q9Y2X8 147 aa-1.71□□□□□ -2.68
RNU6-550P-201ENST00000391057 QSER1Q2KHR3 1735 aa-1.71□□□□□ -2.68
RNU6-550P-201ENST00000391057 CRYBG1Q9Y4K1 1723 aa-1.71□□□□□ -2.68
RNU6-550P-201ENST00000391057 NBEAL2Q6ZNJ1 2754 aa-1.72□□□□□ -2.68
RNU6-550P-201ENST00000391057 MTORP42345 2549 aa-1.72□□□□□ -2.69
RNU6-550P-201ENST00000391057 RGPD8O14715 1765 aaPredicted RBP-1.72□□□□□ -2.69
RNU6-550P-201ENST00000391057 RGPD5Q99666 1765 aa-1.72□□□□□ -2.69
RNU6-550P-201ENST00000391057 DNAH11Q96DT5 4516 aa-1.73□□□□□ -2.69
RNU6-550P-201ENST00000391057 PKD1L3Q7Z443 1732 aa-1.73□□□□□ -2.69
RNU6-550P-201ENST00000391057 DMXL1Q9Y485 3027 aa-1.73□□□□□ -2.69
RNU6-550P-201ENST00000391057 C4AP0C0L4 1744 aa-1.74□□□□□ -2.69
RNU6-550P-201ENST00000391057 C4BP0C0L5 1744 aa-1.74□□□□□ -2.69
RNU6-550P-201ENST00000391057 LRRC9Q6ZRR7 1453 aa-1.74□□□□□ -2.69
RNU6-550P-201ENST00000391057 APOBP04114 4563 aaKnown RBP-1.74□□□□□ -2.69
RNU6-550P-201ENST00000391057 FAUP35544 74 aaKnown RBP-1.74□□□□□ -2.69
RNU6-550P-201ENST00000391057 S100A10P60903 97 aa-1.74□□□□□ -2.69
RNU6-550P-201ENST00000391057 ITPR1Q14643 2758 aa-1.74□□□□□ -2.69
RNU6-550P-201ENST00000391057 MGAM2Q2M2H8 2515 aa-1.75□□□□□ -2.69
RNU6-550P-201ENST00000391057 ACACAQ13085 2346 aa-1.75□□□□□ -2.69
RNU6-550P-201ENST00000391057 LINC00032P0C843 101 aa-1.75□□□□□ -2.69
RNU6-550P-201ENST00000391057 MT1HP80294 61 aa-1.75□□□□□ -2.69
RNU6-550P-201ENST00000391057 DNAH1Q9P2D7 4330 aa-1.75□□□□□ -2.69
RNU6-550P-201ENST00000391057 SACSQ9NZJ4 4579 aa-1.75□□□□□ -2.69
RNU6-550P-201ENST00000391057 RELNP78509 3460 aa-1.76□□□□□ -2.69
RNU6-550P-201ENST00000391057 ZZEF1O43149 2961 aa-1.77□□□□□ -2.69
RNU6-550P-201ENST00000391057 GAFA1Q96PS6 74 aa-1.77□□□□□ -2.69
RNU6-550P-201ENST00000391057 LRRC7Q96NW7 1537 aa-1.79□□□□□ -2.7
RNU6-550P-201ENST00000391057 FYCO1Q9BQS8 1478 aa-1.79□□□□□ -2.7
RNU6-550P-201ENST00000391057 A0A1B0GUT8 65 aa-1.79□□□□□ -2.7
RNU6-550P-201ENST00000391057 C3orf79P0CE67 100 aa-1.79□□□□□ -2.7
RNU6-550P-201ENST00000391057 MT1HL1P0DM35 61 aa-1.79□□□□□ -2.7
RNU6-550P-201ENST00000391057 SARNPP82979 210 aaKnown RBP-1.8□□□□□ -2.7
RNU6-550P-201ENST00000391057 DPY30Q9C005 99 aa-1.8□□□□□ -2.7
RNU6-550P-201ENST00000391057 PRO3102Q9H379 93 aa-1.8□□□□□ -2.7
RNU6-550P-201ENST00000391057 CLTCQ00610 1675 aaKnown RBP-1.8□□□□□ -2.7
RNU6-550P-201ENST00000391057 PKD1L2Q7Z442 2459 aa-1.81□□□□□ -2.7
RNU6-550P-201ENST00000391057 IQCF6A8MYZ5 107 aa-1.81□□□□□ -2.7
RNU6-550P-201ENST00000391057 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.81□□□□□ -2.7
RNU6-550P-201ENST00000391057 MYH4Q9Y623 1939 aa-1.81□□□□□ -2.7
RNU6-550P-201ENST00000391057 TEX14Q8IWB6 1497 aa-1.82□□□□□ -2.7
RNU6-550P-201ENST00000391057 PLGLAQ15195 96 aa-1.82□□□□□ -2.7
RNU6-550P-201ENST00000391057 KRTAP20-1Q3LI63 56 aa-1.82□□□□□ -2.7
RNU6-550P-201ENST00000391057 ALKQ9UM73 1620 aa-1.82□□□□□ -2.7
RNU6-550P-201ENST00000391057 GCN1Q92616 2671 aaKnown RBP-1.82□□□□□ -2.7
RNU6-550P-201ENST00000391057 EPRSP07814 1512 aaKnown RBP-1.82□□□□□ -2.7
RNU6-550P-201ENST00000391057 CEP295Q9C0D2 2601 aa-1.83□□□□□ -2.7
RNU6-550P-201ENST00000391057 S100PP25815 95 aa-1.83□□□□□ -2.7
RNU6-550P-201ENST00000391057 LINC00158P58513 81 aa-1.83□□□□□ -2.7
RNU6-550P-201ENST00000391057 S4R3F8 94 aa-1.83□□□□□ -2.7
RNU6-550P-201ENST00000391057 MAP3K1Q13233 1512 aa-1.84□□□□□ -2.7
RNU6-550P-201ENST00000391057 HMGN2P05204 90 aaKnown RBP-1.84□□□□□ -2.7
RNU6-550P-201ENST00000391057 C14orf144Q96I85 54 aa-1.84□□□□□ -2.7
RNU6-550P-201ENST00000391057 CYB5AP00167 134 aa-1.85□□□□□ -2.71
RNU6-550P-201ENST00000391057 SMIM11AP58511 58 aa-1.85□□□□□ -2.71
RNU6-550P-201ENST00000391057 A0A0C4DFX4 3053 aa-1.86□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms