RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 UBE2DNLQ8IWF7 75 aa13.98□□□□□ -0.17
RNF39-202ENST00000376751 IGKV3D-7A0A0C4DH55 119 aa13.97□□□□□ -0.17
RNF39-202ENST00000376751 FAM236AA0A1B0GUQ0 79 aa13.97□□□□□ -0.17
RNF39-202ENST00000376751 FAM236BA0A1B0GV22 79 aa13.97□□□□□ -0.17
RNF39-202ENST00000376751 M0R2N4 97 aa13.96□□□□□ -0.17
RNF39-202ENST00000376751 DNAH7Q8WXX0 4024 aa13.96□□□□□ -0.17
RNF39-202ENST00000376751 RPL37AP8A6NKH3 93 aa13.96□□□□□ -0.18
RNF39-202ENST00000376751 LOC107984640A0A0U1RRK4 108 aa13.95□□□□□ -0.18
RNF39-202ENST00000376751 PLECQ15149 4684 aaKnown RBP13.94□□□□□ -0.18
RNF39-202ENST00000376751 FAM19A5Q7Z5A7 132 aaPredicted RBP13.92□□□□□ -0.18
RNF39-202ENST00000376751 IGLV1-50A0A075B6I6 118 aa13.92□□□□□ -0.18
RNF39-202ENST00000376751 DSCR8Q96T75 97 aa13.91□□□□□ -0.18
RNF39-202ENST00000376751 KRTAP4-16G5E9R7 235 aaPredicted RBP13.9□□□□□ -0.18
RNF39-202ENST00000376751 PRKDCP78527 4128 aaKnown RBP13.9□□□□□ -0.18
RNF39-202ENST00000376751 PRYO14603 147 aa13.89□□□□□ -0.19
RNF39-202ENST00000376751 TRBV7-4A0A0J9YYF1 115 aa13.88□□□□□ -0.19
RNF39-202ENST00000376751 CCDC179H3BU77 68 aa13.88□□□□□ -0.19
RNF39-202ENST00000376751 PSCAO43653 123 aa13.88□□□□□ -0.19
RNF39-202ENST00000376751 SPRR1AP35321 89 aa13.87□□□□□ -0.19
RNF39-202ENST00000376751 MRPL55Q7Z7F7 128 aaKnown RBP13.87□□□□□ -0.19
RNF39-202ENST00000376751 B5MCH6 92 aa13.87□□□□□ -0.19
RNF39-202ENST00000376751 GHRHP01286 108 aa13.87□□□□□ -0.19
RNF39-202ENST00000376751 CNBPP62633 177 aaKnown RBP13.86□□□□□ -0.19
RNF39-202ENST00000376751 Q6ZRX8 168 aa13.86□□□□□ -0.19
RNF39-202ENST00000376751 Q9BRP9 147 aa13.86□□□□□ -0.19
RNF39-202ENST00000376751 A0A096LNI7 61 aa13.85□□□□□ -0.19
RNF39-202ENST00000376751 HIST1H4AP62805 103 aaKnown RBP13.85□□□□□ -0.19
RNF39-202ENST00000376751 A0A087WVE0 104 aa13.84□□□□□ -0.19
RNF39-202ENST00000376751 PDE6GP18545 87 aa13.84□□□□□ -0.19
RNF39-202ENST00000376751 UBL5Q9BZL1 73 aa13.83□□□□□ -0.2
RNF39-202ENST00000376751 STARD9Q9P2P6 4700 aa13.82□□□□□ -0.2
RNF39-202ENST00000376751 ETDCA0A1B0GVM5 59 aa13.82□□□□□ -0.2
RNF39-202ENST00000376751 LINC01547P58512 204 aaPredicted RBP13.82□□□□□ -0.2
RNF39-202ENST00000376751 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.82□□□□□ -0.2
RNF39-202ENST00000376751 NUPR2A6NF83 97 aa13.82□□□□□ -0.2
RNF39-202ENST00000376751 Q8N377 158 aa13.82□□□□□ -0.2
RNF39-202ENST00000376751 IGKV2-24A0A0C4DH68 120 aa13.81□□□□□ -0.2
RNF39-202ENST00000376751 ATP5EP2Q5VTU8 51 aa13.81□□□□□ -0.2
RNF39-202ENST00000376751 DEFB105AQ8NG35 78 aa13.81□□□□□ -0.2
RNF39-202ENST00000376751 DHRS4-AS1Q9P1J3 65 aa13.81□□□□□ -0.2
RNF39-202ENST00000376751 C16orf90A8MZG2 172 aa13.8□□□□□ -0.2
RNF39-202ENST00000376751 MEGF8Q7Z7M0 2845 aa13.78□□□□□ -0.2
RNF39-202ENST00000376751 NBDYA0A0U1RRE5 68 aa13.78□□□□□ -0.2
RNF39-202ENST00000376751 VPS13DQ5THJ4 4388 aa13.78□□□□□ -0.2
RNF39-202ENST00000376751 A0A1W2PNN7 141 aa13.78□□□□□ -0.2
RNF39-202ENST00000376751 Q6ZVQ6 151 aa13.78□□□□□ -0.2
RNF39-202ENST00000376751 ST20-AS1Q8NBB2 130 aa13.76□□□□□ -0.21
RNF39-202ENST00000376751 LRCOL1A6NCL2 159 aa13.76□□□□□ -0.21
RNF39-202ENST00000376751 ERC2-IT1O76042 136 aa13.76□□□□□ -0.21
RNF39-202ENST00000376751 FAM19A1Q7Z5A9 133 aa13.76□□□□□ -0.21
RNF39-202ENST00000376751 C14orf177Q52M58 125 aa13.75□□□□□ -0.21
RNF39-202ENST00000376751 REG3GQ6UW15 175 aa13.74□□□□□ -0.21
RNF39-202ENST00000376751 Q6ZRN7 208 aaPredicted RBP13.74□□□□□ -0.21
RNF39-202ENST00000376751 C3orf22Q8N5N4 141 aa13.74□□□□□ -0.21
RNF39-202ENST00000376751 DNHD1Q96M86 4753 aa13.74□□□□□ -0.21
RNF39-202ENST00000376751 CHTF8P0CG12 524 aa13.72□□□□□ -0.21
RNF39-202ENST00000376751 IGLV5-48A0A075B6I7 105 aa13.7□□□□□ -0.22
RNF39-202ENST00000376751 ATOX1O00244 68 aa13.7□□□□□ -0.22
RNF39-202ENST00000376751 UBE2BP63146 152 aa13.7□□□□□ -0.22
RNF39-202ENST00000376751 HAMPP81172 84 aa13.69□□□□□ -0.22
RNF39-202ENST00000376751 TNP2Q05952 138 aa13.66□□□□□ -0.22
RNF39-202ENST00000376751 KRTAP11-1Q8IUC1 163 aa13.66□□□□□ -0.22
RNF39-202ENST00000376751 C9orf163Q8N9P6 203 aa13.66□□□□□ -0.22
RNF39-202ENST00000376751 PHF5AQ7RTV0 110 aaKnown RBP13.64□□□□□ -0.23
RNF39-202ENST00000376751 PRLHP81277 87 aa13.63□□□□□ -0.23
RNF39-202ENST00000376751 SCXQ7RTU7 201 aa13.63□□□□□ -0.23
RNF39-202ENST00000376751 COX7CP15954 63 aa13.62□□□□□ -0.23
RNF39-202ENST00000376751 CXCL6P80162 114 aa13.62□□□□□ -0.23
RNF39-202ENST00000376751 UQCRQO14949 82 aa13.62□□□□□ -0.23
RNF39-202ENST00000376751 PANO1I0J062 215 aa13.6□□□□□ -0.23
RNF39-202ENST00000376751 SS18L2Q9UHA2 77 aa13.6□□□□□ -0.23
RNF39-202ENST00000376751 C3orf84H3BNL1 204 aa13.59□□□□□ -0.23
RNF39-202ENST00000376751 A0A1W2PNM2 257 aa13.58□□□□□ -0.24
RNF39-202ENST00000376751 SMIM29Q86T20 159 aa13.58□□□□□ -0.24
RNF39-202ENST00000376751 C1orf137Q5JT78 98 aa13.57□□□□□ -0.24
RNF39-202ENST00000376751 C9orf153Q5TBE3 101 aa13.57□□□□□ -0.24
RNF39-202ENST00000376751 SERP2Q8N6R1 65 aa13.56□□□□□ -0.24
RNF39-202ENST00000376751 HECTD4Q9Y4D8 3996 aa13.56□□□□□ -0.24
RNF39-202ENST00000376751 KMT2AQ03164 3969 aa13.54□□□□□ -0.24
RNF39-202ENST00000376751 HIGD2AQ9BW72 106 aa13.54□□□□□ -0.24
RNF39-202ENST00000376751 NREPQ16612 68 aa13.52□□□□□ -0.25
RNF39-202ENST00000376751 Q8NBF4 154 aa13.52□□□□□ -0.25
RNF39-202ENST00000376751 PKIGQ9Y2B9 76 aa13.52□□□□□ -0.25
RNF39-202ENST00000376751 A0A087WTM6 91 aa13.51□□□□□ -0.25
RNF39-202ENST00000376751 FUSP35637 526 aaKnown RBP eCLIP13.51□□□□□ -0.25
RNF39-202ENST00000376751 SRRM2Q9UQ35 2752 aaKnown RBP13.51□□□□□ -0.25
RNF39-202ENST00000376751 EPM2AB3EWF7 344 aa13.5□□□□□ -0.25
RNF39-202ENST00000376751 Q6ZR54 194 aa13.5□□□□□ -0.25
RNF39-202ENST00000376751 LINC00474Q9P2X8 69 aa13.49□□□□□ -0.25
RNF39-202ENST00000376751 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.49□□□□□ -0.25
RNF39-202ENST00000376751 DNAH2Q9P225 4427 aa13.49□□□□□ -0.25
RNF39-202ENST00000376751 LINC00476Q8WZB0 136 aa13.49□□□□□ -0.25
RNF39-202ENST00000376751 A0A0G2JQZ4 141 aa13.48□□□□□ -0.25
RNF39-202ENST00000376751 CRYGAP11844 174 aa13.48□□□□□ -0.25
RNF39-202ENST00000376751 Q8N9L7 120 aa13.48□□□□□ -0.25
RNF39-202ENST00000376751 FBN3Q75N90 2809 aa13.48□□□□□ -0.25
RNF39-202ENST00000376751 DNAH17Q9UFH2 4485 aa13.47□□□□□ -0.25
RNF39-202ENST00000376751 CYSTM1Q9H1C7 97 aa13.47□□□□□ -0.25
RNF39-202ENST00000376751 SPACA4Q8TDM5 124 aa13.47□□□□□ -0.25
RNF39-202ENST00000376751 SPRR4Q96PI1 79 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms