RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 LINC00528Q8N1L1 170 aa10.78□□□□□ -0.68
PTPN20-203ENST00000374342 C9orf163Q8N9P6 203 aa10.78□□□□□ -0.68
PTPN20-203ENST00000374342 CHTF8P0CG12 524 aa10.77□□□□□ -0.69
PTPN20-203ENST00000374342 CDIP1Q9H305 208 aa10.77□□□□□ -0.69
PTPN20-203ENST00000374342 A0A087WTM6 91 aa10.76□□□□□ -0.69
PTPN20-203ENST00000374342 TMEM256-PLSCR3K7ERE1 68 aa10.76□□□□□ -0.69
PTPN20-203ENST00000374342 LINC00476Q8WZB0 136 aa10.76□□□□□ -0.69
PTPN20-203ENST00000374342 PKIGQ9Y2B9 76 aa10.76□□□□□ -0.69
PTPN20-203ENST00000374342 C14orf132Q9NPU4 83 aa10.75□□□□□ -0.69
PTPN20-203ENST00000374342 A0A1W2PNN7 141 aa10.74□□□□□ -0.69
PTPN20-203ENST00000374342 C1orf134Q5TEV5 83 aa10.74□□□□□ -0.69
PTPN20-203ENST00000374342 OBSCN-AS1Q96MR7 158 aa10.74□□□□□ -0.69
PTPN20-203ENST00000374342 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.73□□□□□ -0.69
PTPN20-203ENST00000374342 ETDCA0A1B0GVM5 59 aa10.72□□□□□ -0.69
PTPN20-203ENST00000374342 FAM240AA0A1B0GVK7 77 aa10.71□□□□□ -0.69
PTPN20-203ENST00000374342 KRTAP4-16G5E9R7 235 aaPredicted RBP10.7□□□□□ -0.7
PTPN20-203ENST00000374342 SPRR1AP35321 89 aa10.7□□□□□ -0.7
PTPN20-203ENST00000374342 GAGE2AQ6NT46 116 aa10.7□□□□□ -0.7
PTPN20-203ENST00000374342 SDIM1Q6ZPB5 146 aa10.7□□□□□ -0.7
PTPN20-203ENST00000374342 Q6ZRX8 168 aa10.7□□□□□ -0.7
PTPN20-203ENST00000374342 B5MCH6 92 aa10.7□□□□□ -0.7
PTPN20-203ENST00000374342 FUSP35637 526 aaKnown RBP eCLIP10.7□□□□□ -0.7
PTPN20-203ENST00000374342 REG3GQ6UW15 175 aa10.7□□□□□ -0.7
PTPN20-203ENST00000374342 JMJD7-PLA2G4BH0Y9G9 81 aa10.69□□□□□ -0.7
PTPN20-203ENST00000374342 SIGMAR1Q99720 223 aa10.69□□□□□ -0.7
PTPN20-203ENST00000374342 LAMTOR3Q9UHA4 124 aa10.69□□□□□ -0.7
PTPN20-203ENST00000374342 KMT2AQ03164 3969 aa10.69□□□□□ -0.7
PTPN20-203ENST00000374342 XGP55808 180 aa10.68□□□□□ -0.7
PTPN20-203ENST00000374342 ALMS1Q8TCU4 4167 aa10.68□□□□□ -0.7
PTPN20-203ENST00000374342 C3orf84H3BNL1 204 aa10.68□□□□□ -0.7
PTPN20-203ENST00000374342 H3BQ85 93 aa10.68□□□□□ -0.7
PTPN20-203ENST00000374342 RTL8CO15255 209 aa10.68□□□□□ -0.7
PTPN20-203ENST00000374342 LINC00474Q9P2X8 69 aa10.67□□□□□ -0.7
PTPN20-203ENST00000374342 PANO1I0J062 215 aa10.66□□□□□ -0.7
PTPN20-203ENST00000374342 PHF5AQ7RTV0 110 aaKnown RBP10.66□□□□□ -0.7
PTPN20-203ENST00000374342 Q9BRP9 147 aa10.66□□□□□ -0.7
PTPN20-203ENST00000374342 DHRS4-AS1Q9P1J3 65 aa10.66□□□□□ -0.7
PTPN20-203ENST00000374342 DNAH2Q9P225 4427 aa10.66□□□□□ -0.7
PTPN20-203ENST00000374342 DNAH6Q9C0G6 4158 aa10.65□□□□□ -0.7
PTPN20-203ENST00000374342 GHRHP01286 108 aa10.65□□□□□ -0.7
PTPN20-203ENST00000374342 MT-ATP8P03928 68 aa10.65□□□□□ -0.7
PTPN20-203ENST00000374342 ACYP1P07311 99 aa10.65□□□□□ -0.7
PTPN20-203ENST00000374342 UBE2BP63146 152 aa10.65□□□□□ -0.7
PTPN20-203ENST00000374342 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.64□□□□□ -0.71
PTPN20-203ENST00000374342 DPH3Q96FX2 82 aa10.63□□□□□ -0.71
PTPN20-203ENST00000374342 SPACA4Q8TDM5 124 aa10.62□□□□□ -0.71
PTPN20-203ENST00000374342 RBM3P98179 157 aaKnown RBP10.62□□□□□ -0.71
PTPN20-203ENST00000374342 IGLV5-52A0A0A0MRZ9 124 aa10.61□□□□□ -0.71
PTPN20-203ENST00000374342 FAM19A1Q7Z5A9 133 aa10.61□□□□□ -0.71
PTPN20-203ENST00000374342 DEFB105AQ8NG35 78 aa10.61□□□□□ -0.71
PTPN20-203ENST00000374342 TNP2Q05952 138 aa10.6□□□□□ -0.71
PTPN20-203ENST00000374342 KRTAP11-1Q8IUC1 163 aa10.6□□□□□ -0.71
PTPN20-203ENST00000374342 DNAH17Q9UFH2 4485 aa10.6□□□□□ -0.71
PTPN20-203ENST00000374342 CCKP06307 115 aa10.6□□□□□ -0.71
PTPN20-203ENST00000374342 NDUFV3P56181 108 aaKnown RBP10.6□□□□□ -0.71
PTPN20-203ENST00000374342 PRLHP81277 87 aa10.6□□□□□ -0.71
PTPN20-203ENST00000374342 SMCR5Q8TEV8 140 aa10.59□□□□□ -0.71
PTPN20-203ENST00000374342 ERC2-IT1O76042 136 aa10.58□□□□□ -0.72
PTPN20-203ENST00000374342 ST20-AS1Q8NBB2 130 aa10.58□□□□□ -0.72
PTPN20-203ENST00000374342 DSCR8Q96T75 97 aa10.57□□□□□ -0.72
PTPN20-203ENST00000374342 LOC110117498A0A087WWA1 95 aa10.56□□□□□ -0.72
PTPN20-203ENST00000374342 LINC01547P58512 204 aaPredicted RBP10.56□□□□□ -0.72
PTPN20-203ENST00000374342 Q6ZQT0 140 aa10.56□□□□□ -0.72
PTPN20-203ENST00000374342 Q8N377 158 aa10.56□□□□□ -0.72
PTPN20-203ENST00000374342 HECTD4Q9Y4D8 3996 aa10.56□□□□□ -0.72
PTPN20-203ENST00000374342 HIGD2AQ9BW72 106 aa10.54□□□□□ -0.72
PTPN20-203ENST00000374342 LINC00846Q9NV44 126 aa10.53□□□□□ -0.72
PTPN20-203ENST00000374342 IGLV5-48A0A075B6I7 105 aa10.52□□□□□ -0.72
PTPN20-203ENST00000374342 C3orf22Q8N5N4 141 aa10.52□□□□□ -0.72
PTPN20-203ENST00000374342 TRBV7-4A0A0J9YYF1 115 aa10.52□□□□□ -0.73
PTPN20-203ENST00000374342 EPM2AB3EWF7 344 aa10.51□□□□□ -0.73
PTPN20-203ENST00000374342 PCP4P48539 62 aa10.51□□□□□ -0.73
PTPN20-203ENST00000374342 LINC00643Q86TS7 51 aa10.51□□□□□ -0.73
PTPN20-203ENST00000374342 FRAS1Q86XX4 4008 aa10.51□□□□□ -0.73
PTPN20-203ENST00000374342 PDE6GP18545 87 aa10.5□□□□□ -0.73
PTPN20-203ENST00000374342 UBE2AP49459 152 aa10.5□□□□□ -0.73
PTPN20-203ENST00000374342 KRTAP10-2P60368 255 aa10.49□□□□□ -0.73
PTPN20-203ENST00000374342 BCE1O60756 84 aa10.48□□□□□ -0.73
PTPN20-203ENST00000374342 SCGB1A1P11684 91 aa10.48□□□□□ -0.73
PTPN20-203ENST00000374342 PLAC8Q9NZF1 115 aa10.48□□□□□ -0.73
PTPN20-203ENST00000374342 H0Y9J4 135 aa10.47□□□□□ -0.73
PTPN20-203ENST00000374342 HYDINQ4G0P3 5121 aa10.44□□□□□ -0.74
PTPN20-203ENST00000374342 TRBV7-7A0A0K0K1E9 115 aa10.44□□□□□ -0.74
PTPN20-203ENST00000374342 C21orf62-AS1Q17RA5 79 aa10.44□□□□□ -0.74
PTPN20-203ENST00000374342 Q6JHZ5 121 aa10.43□□□□□ -0.74
PTPN20-203ENST00000374342 UBL5Q9BZL1 73 aa10.43□□□□□ -0.74
PTPN20-203ENST00000374342 KRTAP13-1Q8IUC0 172 aa10.42□□□□□ -0.74
PTPN20-203ENST00000374342 Q6Q795 121 aa10.41□□□□□ -0.74
PTPN20-203ENST00000374342 SMIM29Q86T20 159 aa10.41□□□□□ -0.74
PTPN20-203ENST00000374342 DNAH11Q96DT5 4516 aa10.41□□□□□ -0.74
PTPN20-203ENST00000374342 IGKV3D-7A0A0C4DH55 119 aa10.41□□□□□ -0.74
PTPN20-203ENST00000374342 F8WEM9 126 aa10.41□□□□□ -0.74
PTPN20-203ENST00000374342 PSORS1C2Q9UIG4 136 aa10.41□□□□□ -0.74
PTPN20-203ENST00000374342 C1orf137Q5JT78 98 aa10.39□□□□□ -0.75
PTPN20-203ENST00000374342 LCE6AA0A183 80 aa10.38□□□□□ -0.75
PTPN20-203ENST00000374342 FAM30AQ9NZY2 134 aa10.38□□□□□ -0.75
PTPN20-203ENST00000374342 DNAH5Q8TE73 4624 aa10.37□□□□□ -0.75
PTPN20-203ENST00000374342 DNAH8Q96JB1 4490 aa10.37□□□□□ -0.75
PTPN20-203ENST00000374342 Q6ZVQ6 151 aa10.37□□□□□ -0.75
PTPN20-203ENST00000374342 IMUPQ9GZP8 106 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms