RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 F8WDY8 70 aa10.33□□□□□ -0.76
CNKSR1-202ENST00000374253 DEFB105AQ8NG35 78 aa10.33□□□□□ -0.76
CNKSR1-202ENST00000374253 PRKDCP78527 4128 aaKnown RBP10.32□□□□□ -0.76
CNKSR1-202ENST00000374253 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.32□□□□□ -0.76
CNKSR1-202ENST00000374253 DSCR8Q96T75 97 aa10.32□□□□□ -0.76
CNKSR1-202ENST00000374253 Q6JHZ5 121 aa10.31□□□□□ -0.76
CNKSR1-202ENST00000374253 TLX1NBP0CAT3 122 aa10.3□□□□□ -0.76
CNKSR1-202ENST00000374253 HIST1H4AP62805 103 aaKnown RBP10.3□□□□□ -0.76
CNKSR1-202ENST00000374253 TRBV7-6A0A0J9YX20 115 aa10.3□□□□□ -0.76
CNKSR1-202ENST00000374253 KCNQ1DNQ9H478 68 aa10.3□□□□□ -0.76
CNKSR1-202ENST00000374253 DYNC2H1Q8NCM8 4307 aaKnown RBP10.29□□□□□ -0.76
CNKSR1-202ENST00000374253 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.29□□□□□ -0.76
CNKSR1-202ENST00000374253 PSCAO43653 123 aa10.29□□□□□ -0.76
CNKSR1-202ENST00000374253 IGKV2-24A0A0C4DH68 120 aa10.29□□□□□ -0.76
CNKSR1-202ENST00000374253 STARD9Q9P2P6 4700 aa10.28□□□□□ -0.76
CNKSR1-202ENST00000374253 APLNQ9ULZ1 77 aa10.28□□□□□ -0.76
CNKSR1-202ENST00000374253 DNHD1Q96M86 4753 aa10.27□□□□□ -0.77
CNKSR1-202ENST00000374253 LOC110117498A0A087WWA1 95 aa10.27□□□□□ -0.77
CNKSR1-202ENST00000374253 C3orf22Q8N5N4 141 aa10.26□□□□□ -0.77
CNKSR1-202ENST00000374253 UBL5Q9BZL1 73 aa10.26□□□□□ -0.77
CNKSR1-202ENST00000374253 FAM19A1Q7Z5A9 133 aa10.26□□□□□ -0.77
CNKSR1-202ENST00000374253 B9D2Q9BPU9 175 aa10.26□□□□□ -0.77
CNKSR1-202ENST00000374253 IGLV1-50A0A075B6I6 118 aa10.25□□□□□ -0.77
CNKSR1-202ENST00000374253 LOC107984640A0A0U1RRK4 108 aa10.25□□□□□ -0.77
CNKSR1-202ENST00000374253 Q9BRP9 147 aa10.24□□□□□ -0.77
CNKSR1-202ENST00000374253 MEGF8Q7Z7M0 2845 aa10.24□□□□□ -0.77
CNKSR1-202ENST00000374253 MRPL55Q7Z7F7 128 aaKnown RBP10.24□□□□□ -0.77
CNKSR1-202ENST00000374253 SS18L2Q9UHA2 77 aa10.24□□□□□ -0.77
CNKSR1-202ENST00000374253 A0A096LNI7 61 aa10.23□□□□□ -0.77
CNKSR1-202ENST00000374253 HAMPP81172 84 aa10.23□□□□□ -0.77
CNKSR1-202ENST00000374253 ST20-AS1Q8NBB2 130 aa10.23□□□□□ -0.77
CNKSR1-202ENST00000374253 SRRM2Q9UQ35 2752 aaKnown RBP10.23□□□□□ -0.77
CNKSR1-202ENST00000374253 ETDCA0A1B0GVM5 59 aa10.23□□□□□ -0.77
CNKSR1-202ENST00000374253 TRBV7-4A0A0J9YYF1 115 aa10.22□□□□□ -0.77
CNKSR1-202ENST00000374253 PLA2G2DQ9UNK4 145 aa10.22□□□□□ -0.77
CNKSR1-202ENST00000374253 Q6ZRX8 168 aa10.22□□□□□ -0.77
CNKSR1-202ENST00000374253 Q6ZVQ6 151 aa10.21□□□□□ -0.77
CNKSR1-202ENST00000374253 Q8N377 158 aa10.21□□□□□ -0.77
CNKSR1-202ENST00000374253 SCXQ7RTU7 201 aa10.21□□□□□ -0.78
CNKSR1-202ENST00000374253 KRTAP4-16G5E9R7 235 aaPredicted RBP10.2□□□□□ -0.78
CNKSR1-202ENST00000374253 ERC2-IT1O76042 136 aa10.2□□□□□ -0.78
CNKSR1-202ENST00000374253 H3BQ85 93 aa10.2□□□□□ -0.78
CNKSR1-202ENST00000374253 CHTF8P0CG12 524 aa10.2□□□□□ -0.78
CNKSR1-202ENST00000374253 IGLV5-37A0A075B6J1 123 aa10.19□□□□□ -0.78
CNKSR1-202ENST00000374253 A0A1W2PNN7 141 aa10.18□□□□□ -0.78
CNKSR1-202ENST00000374253 PRYO14603 147 aa10.18□□□□□ -0.78
CNKSR1-202ENST00000374253 GHRHP01286 108 aa10.18□□□□□ -0.78
CNKSR1-202ENST00000374253 LINC01547P58512 204 aaPredicted RBP10.17□□□□□ -0.78
CNKSR1-202ENST00000374253 UBE2BP63146 152 aa10.17□□□□□ -0.78
CNKSR1-202ENST00000374253 PDE6GP18545 87 aa10.16□□□□□ -0.78
CNKSR1-202ENST00000374253 SPRR1AP35321 89 aa10.16□□□□□ -0.78
CNKSR1-202ENST00000374253 C3orf84H3BNL1 204 aa10.15□□□□□ -0.78
CNKSR1-202ENST00000374253 DHRS4-AS1Q9P1J3 65 aa10.15□□□□□ -0.78
CNKSR1-202ENST00000374253 KMT2AQ03164 3969 aa10.15□□□□□ -0.78
CNKSR1-202ENST00000374253 ATOX1O00244 68 aa10.14□□□□□ -0.79
CNKSR1-202ENST00000374253 ATP5EP2Q5VTU8 51 aa10.14□□□□□ -0.79
CNKSR1-202ENST00000374253 REG3GQ6UW15 175 aa10.14□□□□□ -0.79
CNKSR1-202ENST00000374253 C16orf90A8MZG2 172 aa10.13□□□□□ -0.79
CNKSR1-202ENST00000374253 PRLHP81277 87 aa10.13□□□□□ -0.79
CNKSR1-202ENST00000374253 C9orf153Q5TBE3 101 aa10.13□□□□□ -0.79
CNKSR1-202ENST00000374253 TGP01266 2768 aa10.13□□□□□ -0.79
CNKSR1-202ENST00000374253 FUSP35637 526 aaKnown RBP eCLIP10.13□□□□□ -0.79
CNKSR1-202ENST00000374253 CNBPP62633 177 aaKnown RBP10.13□□□□□ -0.79
CNKSR1-202ENST00000374253 VPS13DQ5THJ4 4388 aa10.12□□□□□ -0.79
CNKSR1-202ENST00000374253 NBDYA0A0U1RRE5 68 aa10.12□□□□□ -0.79
CNKSR1-202ENST00000374253 COX7CP15954 63 aa10.11□□□□□ -0.79
CNKSR1-202ENST00000374253 UQCRQO14949 82 aa10.1□□□□□ -0.79
CNKSR1-202ENST00000374253 PHF5AQ7RTV0 110 aaKnown RBP10.1□□□□□ -0.79
CNKSR1-202ENST00000374253 KRTAP11-1Q8IUC1 163 aa10.1□□□□□ -0.79
CNKSR1-202ENST00000374253 A0A0G2JQZ4 141 aa10.1□□□□□ -0.79
CNKSR1-202ENST00000374253 NUPR2A6NF83 97 aa10.09□□□□□ -0.79
CNKSR1-202ENST00000374253 Q8N9L7 120 aa10.09□□□□□ -0.79
CNKSR1-202ENST00000374253 LRCOL1A6NCL2 159 aa10.08□□□□□ -0.8
CNKSR1-202ENST00000374253 CYSTM1Q9H1C7 97 aa10.08□□□□□ -0.8
CNKSR1-202ENST00000374253 HIGD2AQ9BW72 106 aa10.08□□□□□ -0.8
CNKSR1-202ENST00000374253 DNAH2Q9P225 4427 aa10.07□□□□□ -0.8
CNKSR1-202ENST00000374253 PANO1I0J062 215 aa10.07□□□□□ -0.8
CNKSR1-202ENST00000374253 IGLV5-48A0A075B6I7 105 aa10.06□□□□□ -0.8
CNKSR1-202ENST00000374253 C1orf137Q5JT78 98 aa10.05□□□□□ -0.8
CNKSR1-202ENST00000374253 SERP2Q8N6R1 65 aa10.05□□□□□ -0.8
CNKSR1-202ENST00000374253 C14orf177Q52M58 125 aa10.05□□□□□ -0.8
CNKSR1-202ENST00000374253 HECTD4Q9Y4D8 3996 aa10.05□□□□□ -0.8
CNKSR1-202ENST00000374253 A0A1W2PNM2 257 aa10.04□□□□□ -0.8
CNKSR1-202ENST00000374253 Q6ZRN7 208 aaPredicted RBP10.04□□□□□ -0.8
CNKSR1-202ENST00000374253 NREPQ16612 68 aa10.04□□□□□ -0.8
CNKSR1-202ENST00000374253 DPH3Q96FX2 82 aa10.04□□□□□ -0.8
CNKSR1-202ENST00000374253 CXCL6P80162 114 aa10.03□□□□□ -0.8
CNKSR1-202ENST00000374253 C9orf163Q8N9P6 203 aa10.03□□□□□ -0.8
CNKSR1-202ENST00000374253 TNP2Q05952 138 aa10.02□□□□□ -0.8
CNKSR1-202ENST00000374253 SMIM29Q86T20 159 aa10.01□□□□□ -0.81
CNKSR1-202ENST00000374253 BPY2O14599 106 aa10□□□□□ -0.81
CNKSR1-202ENST00000374253 FBN3Q75N90 2809 aa9.99□□□□□ -0.81
CNKSR1-202ENST00000374253 CRYGAP11844 174 aa9.98□□□□□ -0.81
CNKSR1-202ENST00000374253 LINC00476Q8WZB0 136 aa9.98□□□□□ -0.81
CNKSR1-202ENST00000374253 EPM2AB3EWF7 344 aa9.97□□□□□ -0.81
CNKSR1-202ENST00000374253 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.97□□□□□ -0.81
CNKSR1-202ENST00000374253 SMIM20Q8N5G0 67 aa9.96□□□□□ -0.81
CNKSR1-202ENST00000374253 Q8NBF4 154 aa9.96□□□□□ -0.81
CNKSR1-202ENST00000374253 FRAS1Q86XX4 4008 aa9.95□□□□□ -0.82
CNKSR1-202ENST00000374253 F8WEM9 126 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms