RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 STARD9Q9P2P6 4700 aa12.56□□□□□ -0.4
HDAC1-201ENST00000373548 RPL37AP8A6NKH3 93 aa12.56□□□□□ -0.4
HDAC1-201ENST00000373548 C14orf177Q52M58 125 aa12.56□□□□□ -0.4
HDAC1-201ENST00000373548 FAM19A5Q7Z5A7 132 aaPredicted RBP12.56□□□□□ -0.4
HDAC1-201ENST00000373548 SDIM1Q6ZPB5 146 aa12.55□□□□□ -0.4
HDAC1-201ENST00000373548 IGLV1-50A0A075B6I6 118 aa12.55□□□□□ -0.4
HDAC1-201ENST00000373548 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.55□□□□□ -0.4
HDAC1-201ENST00000373548 A0A096LNI7 61 aa12.54□□□□□ -0.4
HDAC1-201ENST00000373548 Q6ZRN7 208 aaPredicted RBP12.54□□□□□ -0.4
HDAC1-201ENST00000373548 LRCOL1A6NCL2 159 aa12.53□□□□□ -0.4
HDAC1-201ENST00000373548 H3BQ85 93 aa12.53□□□□□ -0.4
HDAC1-201ENST00000373548 MRPL55Q7Z7F7 128 aaKnown RBP12.53□□□□□ -0.4
HDAC1-201ENST00000373548 C16orf90A8MZG2 172 aa12.52□□□□□ -0.4
HDAC1-201ENST00000373548 PRYO14603 147 aa12.52□□□□□ -0.41
HDAC1-201ENST00000373548 CCKP06307 115 aa12.51□□□□□ -0.41
HDAC1-201ENST00000373548 LAMTOR3Q9UHA4 124 aa12.51□□□□□ -0.41
HDAC1-201ENST00000373548 VPS13DQ5THJ4 4388 aa12.51□□□□□ -0.41
HDAC1-201ENST00000373548 KRTAP4-16G5E9R7 235 aaPredicted RBP12.5□□□□□ -0.41
HDAC1-201ENST00000373548 SPRR1AP35321 89 aa12.5□□□□□ -0.41
HDAC1-201ENST00000373548 IGKV2-24A0A0C4DH68 120 aa12.49□□□□□ -0.41
HDAC1-201ENST00000373548 M0R2N4 97 aa12.49□□□□□ -0.41
HDAC1-201ENST00000373548 LINC00643Q86TS7 51 aa12.49□□□□□ -0.41
HDAC1-201ENST00000373548 RBM3P98179 157 aaKnown RBP12.48□□□□□ -0.41
HDAC1-201ENST00000373548 LINC00846Q9NV44 126 aa12.47□□□□□ -0.41
HDAC1-201ENST00000373548 B5MCH6 92 aa12.47□□□□□ -0.41
HDAC1-201ENST00000373548 GHRHP01286 108 aa12.47□□□□□ -0.41
HDAC1-201ENST00000373548 Q6Q795 121 aa12.46□□□□□ -0.41
HDAC1-201ENST00000373548 Q6ZRX8 168 aa12.46□□□□□ -0.41
HDAC1-201ENST00000373548 A0A1W2PNN7 141 aa12.46□□□□□ -0.42
HDAC1-201ENST00000373548 ETDCA0A1B0GVM5 59 aa12.44□□□□□ -0.42
HDAC1-201ENST00000373548 C9orf163Q8N9P6 203 aa12.44□□□□□ -0.42
HDAC1-201ENST00000373548 LOC110117498A0A087WWA1 95 aa12.44□□□□□ -0.42
HDAC1-201ENST00000373548 TRBV7-7A0A0K0K1E9 115 aa12.44□□□□□ -0.42
HDAC1-201ENST00000373548 Q6ZQT0 140 aa12.44□□□□□ -0.42
HDAC1-201ENST00000373548 Q9BRP9 147 aa12.43□□□□□ -0.42
HDAC1-201ENST00000373548 CHTF8P0CG12 524 aa12.43□□□□□ -0.42
HDAC1-201ENST00000373548 NDUFV3P56181 108 aaKnown RBP12.42□□□□□ -0.42
HDAC1-201ENST00000373548 DHRS4-AS1Q9P1J3 65 aa12.42□□□□□ -0.42
HDAC1-201ENST00000373548 REG3GQ6UW15 175 aa12.4□□□□□ -0.42
HDAC1-201ENST00000373548 DSCR8Q96T75 97 aa12.4□□□□□ -0.42
HDAC1-201ENST00000373548 Q6ZR54 194 aa12.39□□□□□ -0.43
HDAC1-201ENST00000373548 TRBV7-4A0A0J9YYF1 115 aa12.37□□□□□ -0.43
HDAC1-201ENST00000373548 LINC01547P58512 204 aaPredicted RBP12.37□□□□□ -0.43
HDAC1-201ENST00000373548 Q8N377 158 aa12.37□□□□□ -0.43
HDAC1-201ENST00000373548 DEFB105AQ8NG35 78 aa12.37□□□□□ -0.43
HDAC1-201ENST00000373548 IMUPQ9GZP8 106 aa12.37□□□□□ -0.43
HDAC1-201ENST00000373548 PDE6GP18545 87 aa12.36□□□□□ -0.43
HDAC1-201ENST00000373548 PKIGQ9Y2B9 76 aa12.36□□□□□ -0.43
HDAC1-201ENST00000373548 A0A087WTM6 91 aa12.35□□□□□ -0.43
HDAC1-201ENST00000373548 Q6JHZ5 121 aa12.34□□□□□ -0.43
HDAC1-201ENST00000373548 ERC2-IT1O76042 136 aa12.34□□□□□ -0.43
HDAC1-201ENST00000373548 UBE2BP63146 152 aa12.33□□□□□ -0.44
HDAC1-201ENST00000373548 PHF5AQ7RTV0 110 aaKnown RBP12.33□□□□□ -0.44
HDAC1-201ENST00000373548 ST20-AS1Q8NBB2 130 aa12.33□□□□□ -0.44
HDAC1-201ENST00000373548 PANO1I0J062 215 aa12.31□□□□□ -0.44
HDAC1-201ENST00000373548 KRTAP11-1Q8IUC1 163 aa12.31□□□□□ -0.44
HDAC1-201ENST00000373548 IGLV5-48A0A075B6I7 105 aa12.31□□□□□ -0.44
HDAC1-201ENST00000373548 IGKV3D-7A0A0C4DH55 119 aa12.31□□□□□ -0.44
HDAC1-201ENST00000373548 LINC00474Q9P2X8 69 aa12.3□□□□□ -0.44
HDAC1-201ENST00000373548 FAM19A1Q7Z5A9 133 aa12.28□□□□□ -0.44
HDAC1-201ENST00000373548 KMT2AQ03164 3969 aa12.28□□□□□ -0.44
HDAC1-201ENST00000373548 PRLHP81277 87 aa12.28□□□□□ -0.44
HDAC1-201ENST00000373548 C3orf22Q8N5N4 141 aa12.28□□□□□ -0.44
HDAC1-201ENST00000373548 ANAPC13Q9BS18 74 aa12.28□□□□□ -0.44
HDAC1-201ENST00000373548 UBL5Q9BZL1 73 aa12.28□□□□□ -0.44
HDAC1-201ENST00000373548 FUSP35637 526 aaKnown RBP eCLIP12.26□□□□□ -0.451e-8■□□□□ 10.5
HDAC1-201ENST00000373548 LY6G6CO95867 125 aa12.26□□□□□ -0.45
HDAC1-201ENST00000373548 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.25□□□□□ -0.45
HDAC1-201ENST00000373548 C1orf134Q5TEV5 83 aa12.25□□□□□ -0.45
HDAC1-201ENST00000373548 FAM236AA0A1B0GUQ0 79 aa12.24□□□□□ -0.45
HDAC1-201ENST00000373548 FAM236BA0A1B0GV22 79 aa12.24□□□□□ -0.45
HDAC1-201ENST00000373548 SPACA4Q8TDM5 124 aa12.24□□□□□ -0.45
HDAC1-201ENST00000373548 WWC2-AS2Q96NR7 200 aa12.24□□□□□ -0.45
HDAC1-201ENST00000373548 RTL8CO15255 209 aa12.23□□□□□ -0.45
HDAC1-201ENST00000373548 DNAH2Q9P225 4427 aa12.22□□□□□ -0.45
HDAC1-201ENST00000373548 TNP2Q05952 138 aa12.22□□□□□ -0.45
HDAC1-201ENST00000373548 ATP5EP2Q5VTU8 51 aa12.22□□□□□ -0.45
HDAC1-201ENST00000373548 Q6ZVQ6 151 aa12.22□□□□□ -0.45
HDAC1-201ENST00000373548 DPH3Q96FX2 82 aa12.22□□□□□ -0.45
HDAC1-201ENST00000373548 LINC00476Q8WZB0 136 aa12.21□□□□□ -0.45
HDAC1-201ENST00000373548 EPM2AB3EWF7 344 aa12.2□□□□□ -0.46
HDAC1-201ENST00000373548 HIGD2AQ9BW72 106 aa12.2□□□□□ -0.46
HDAC1-201ENST00000373548 DNAH17Q9UFH2 4485 aa12.18□□□□□ -0.46
HDAC1-201ENST00000373548 H0Y9J4 135 aa12.18□□□□□ -0.46
HDAC1-201ENST00000373548 SMIM29Q86T20 159 aa12.18□□□□□ -0.46
HDAC1-201ENST00000373548 A0A087WVE0 104 aa12.16□□□□□ -0.46
HDAC1-201ENST00000373548 HIST1H4AP62805 103 aaKnown RBP12.16□□□□□ -0.46
HDAC1-201ENST00000373548 DNAH6Q9C0G6 4158 aa12.15□□□□□ -0.46
HDAC1-201ENST00000373548 C1orf137Q5JT78 98 aa12.14□□□□□ -0.47
HDAC1-201ENST00000373548 HECTD4Q9Y4D8 3996 aa12.14□□□□□ -0.47
HDAC1-201ENST00000373548 HAMPP81172 84 aa12.14□□□□□ -0.47
HDAC1-201ENST00000373548 IGLV5-52A0A0A0MRZ9 124 aa12.13□□□□□ -0.47
HDAC1-201ENST00000373548 A0A1W2PNM2 257 aa12.13□□□□□ -0.47
HDAC1-201ENST00000373548 BCE1O60756 84 aa12.13□□□□□ -0.47
HDAC1-201ENST00000373548 UBE2AP49459 152 aa12.13□□□□□ -0.47
HDAC1-201ENST00000373548 C3orf84H3BNL1 204 aa12.1□□□□□ -0.47
HDAC1-201ENST00000373548 KRTAP13-1Q8IUC0 172 aa12.1□□□□□ -0.47
HDAC1-201ENST00000373548 ALMS1Q8TCU4 4167 aa12.09□□□□□ -0.47
HDAC1-201ENST00000373548 F8WEM9 126 aa12.08□□□□□ -0.47
HDAC1-201ENST00000373548 CXCL6P80162 114 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms