RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 ANKRD36BQ8N2N9 1353 aa-1.56□□□□□ -2.66
RNU6-560P-201ENST00000364007 CUBNO60494 3623 aa-1.56□□□□□ -2.66
RNU6-560P-201ENST00000364007 HTTP42858 3142 aa-1.56□□□□□ -2.66
RNU6-560P-201ENST00000364007 MT-ATP8P03928 68 aa-1.56□□□□□ -2.66
RNU6-560P-201ENST00000364007 ANKRD11Q6UB99 2663 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-560P-201ENST00000364007 CLIP1P30622 1438 aa-1.57□□□□□ -2.66
RNU6-560P-201ENST00000364007 C4AP0C0L4 1744 aa-1.57□□□□□ -2.66
RNU6-560P-201ENST00000364007 C4BP0C0L5 1744 aa-1.57□□□□□ -2.66
RNU6-560P-201ENST00000364007 CICQ96RK0 1608 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-560P-201ENST00000364007 MPC2O95563 127 aa-1.57□□□□□ -2.66
RNU6-560P-201ENST00000364007 PREX1Q8TCU6 1659 aa-1.58□□□□□ -2.66
RNU6-560P-201ENST00000364007 DYNC1H1Q14204 4646 aaKnown RBP-1.58□□□□□ -2.66
RNU6-560P-201ENST00000364007 HIGD1BQ9P298 99 aa-1.58□□□□□ -2.66
RNU6-560P-201ENST00000364007 AKAP9Q99996 3911 aa-1.59□□□□□ -2.66
RNU6-560P-201ENST00000364007 CMYA5Q8N3K9 4069 aa-1.59□□□□□ -2.66
RNU6-560P-201ENST00000364007 H0YGG7 62 aa-1.59□□□□□ -2.66
RNU6-560P-201ENST00000364007 VPS13BQ7Z7G8 4022 aa-1.59□□□□□ -2.66
RNU6-560P-201ENST00000364007 COL6A5A8TX70 2615 aa-1.6□□□□□ -2.67
RNU6-560P-201ENST00000364007 ATOX1O00244 68 aa-1.6□□□□□ -2.67
RNU6-560P-201ENST00000364007 SERP2Q8N6R1 65 aa-1.6□□□□□ -2.67
RNU6-560P-201ENST00000364007 AP4S1Q9Y587 144 aa-1.6□□□□□ -2.67
RNU6-560P-201ENST00000364007 ZZEF1O43149 2961 aa-1.61□□□□□ -2.67
RNU6-560P-201ENST00000364007 TMEM218A2RU14 115 aa-1.62□□□□□ -2.67
RNU6-560P-201ENST00000364007 IGLC2P0DOY2 106 aa-1.62□□□□□ -2.67
RNU6-560P-201ENST00000364007 IGLC3P0DOY3 106 aa-1.62□□□□□ -2.67
RNU6-560P-201ENST00000364007 S100A10P60903 97 aa-1.62□□□□□ -2.67
RNU6-560P-201ENST00000364007 MGAM2Q2M2H8 2515 aa-1.62□□□□□ -2.67
RNU6-560P-201ENST00000364007 NBEAL2Q6ZNJ1 2754 aa-1.63□□□□□ -2.67
RNU6-560P-201ENST00000364007 ETDBQ3ZM63 59 aa-1.63□□□□□ -2.67
RNU6-560P-201ENST00000364007 PSENENQ9NZ42 101 aa-1.63□□□□□ -2.67
RNU6-560P-201ENST00000364007 ALKQ9UM73 1620 aa-1.63□□□□□ -2.67
RNU6-560P-201ENST00000364007 RIF1Q5UIP0 2472 aaKnown RBP-1.63□□□□□ -2.67
RNU6-560P-201ENST00000364007 FYCO1Q9BQS8 1478 aa-1.63□□□□□ -2.67
RNU6-560P-201ENST00000364007 F8WEM9 126 aa-1.64□□□□□ -2.67
RNU6-560P-201ENST00000364007 ITPR1Q14643 2758 aa-1.64□□□□□ -2.67
RNU6-560P-201ENST00000364007 RGPD1P0DJD0 1748 aa-1.64□□□□□ -2.67
RNU6-560P-201ENST00000364007 MTORP42345 2549 aa-1.65□□□□□ -2.67
RNU6-560P-201ENST00000364007 DNAH9Q9NYC9 4486 aa-1.65□□□□□ -2.67
RNU6-560P-201ENST00000364007 APOBP04114 4563 aaKnown RBP-1.65□□□□□ -2.67
RNU6-560P-201ENST00000364007 TIAM2Q8IVF5 1701 aa-1.65□□□□□ -2.67
RNU6-560P-201ENST00000364007 D6R8Y8 96 aa-1.65□□□□□ -2.67
RNU6-560P-201ENST00000364007 MUSTN1Q8IVN3 82 aa-1.65□□□□□ -2.67
RNU6-560P-201ENST00000364007 SPRR2FQ96RM1 72 aa-1.65□□□□□ -2.67
RNU6-560P-201ENST00000364007 TROQ12816 1431 aaPredicted RBP-1.66□□□□□ -2.67
RNU6-560P-201ENST00000364007 SUPT6HQ7KZ85 1726 aaKnown RBP-1.66□□□□□ -2.67
RNU6-560P-201ENST00000364007 RGPD8O14715 1765 aaPredicted RBP-1.66□□□□□ -2.68
RNU6-560P-201ENST00000364007 RGPD5Q99666 1765 aa-1.66□□□□□ -2.68
RNU6-560P-201ENST00000364007 LEPROTL1O95214 131 aa-1.66□□□□□ -2.68
RNU6-560P-201ENST00000364007 DNAH1Q9P2D7 4330 aa-1.67□□□□□ -2.68
RNU6-560P-201ENST00000364007 HMGN3Q15651 99 aa-1.67□□□□□ -2.68
RNU6-560P-201ENST00000364007 UBR1Q8IWV7 1749 aa-1.67□□□□□ -2.68
RNU6-560P-201ENST00000364007 SACSQ9NZJ4 4579 aa-1.67□□□□□ -2.68
RNU6-560P-201ENST00000364007 MAGI2Q86UL8 1455 aa-1.68□□□□□ -2.68
RNU6-560P-201ENST00000364007 COL5A1-AS1Q5SY13 56 aa-1.68□□□□□ -2.68
RNU6-560P-201ENST00000364007 ZNF720Q7Z2F6 126 aa-1.68□□□□□ -2.68
RNU6-560P-201ENST00000364007 C14orf144Q96I85 54 aa-1.68□□□□□ -2.68
RNU6-560P-201ENST00000364007 RGPD3A6NKT7 1758 aaPredicted RBP-1.68□□□□□ -2.68
RNU6-560P-201ENST00000364007 RGPD4Q7Z3J3 1758 aa-1.68□□□□□ -2.68
RNU6-560P-201ENST00000364007 SRCAPQ6ZRS2 3230 aa-1.68□□□□□ -2.68
RNU6-560P-201ENST00000364007 DNAH7Q8WXX0 4024 aa-1.69□□□□□ -2.68
RNU6-560P-201ENST00000364007 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.69□□□□□ -2.68
RNU6-560P-201ENST00000364007 A0A0C4DFX4 3053 aa-1.69□□□□□ -2.68
RNU6-560P-201ENST00000364007 ANKRD26Q9UPS8 1709 aa-1.69□□□□□ -2.68
RNU6-560P-201ENST00000364007 UQCRHLA0A096LP55 91 aa-1.7□□□□□ -2.68
RNU6-560P-201ENST00000364007 S100PP25815 95 aa-1.7□□□□□ -2.68
RNU6-560P-201ENST00000364007 FAUP35544 74 aaKnown RBP-1.7□□□□□ -2.68
RNU6-560P-201ENST00000364007 DMXL1Q9Y485 3027 aa-1.7□□□□□ -2.68
RNU6-560P-201ENST00000364007 DNAH11Q96DT5 4516 aa-1.7□□□□□ -2.68
RNU6-560P-201ENST00000364007 ALKAL2Q6UX46 152 aa-1.71□□□□□ -2.68
RNU6-560P-201ENST00000364007 TEX14Q8IWB6 1497 aa-1.71□□□□□ -2.68
RNU6-560P-201ENST00000364007 AKAP12Q02952 1782 aa-1.72□□□□□ -2.68
RNU6-560P-201ENST00000364007 SCN11AQ9UI33 1791 aa-1.72□□□□□ -2.68
RNU6-560P-201ENST00000364007 LRRK2Q5S007 2527 aa-1.72□□□□□ -2.68
RNU6-560P-201ENST00000364007 NMSQ5H8A3 153 aa-1.72□□□□□ -2.68
RNU6-560P-201ENST00000364007 UBE2D4Q9Y2X8 147 aa-1.72□□□□□ -2.68
RNU6-560P-201ENST00000364007 LRRC7Q96NW7 1537 aa-1.72□□□□□ -2.69
RNU6-560P-201ENST00000364007 COX7BP24311 80 aa-1.73□□□□□ -2.69
RNU6-560P-201ENST00000364007 CCDC168Q8NDH2 2452 aa-1.73□□□□□ -2.69
RNU6-560P-201ENST00000364007 CNTLNQ9NXG0 1405 aa-1.74□□□□□ -2.69
RNU6-560P-201ENST00000364007 NBEAQ8NFP9 2946 aa-1.74□□□□□ -2.69
RNU6-560P-201ENST00000364007 POLR1AO95602 1720 aaPredicted RBP-1.74□□□□□ -2.69
RNU6-560P-201ENST00000364007 GCN1Q92616 2671 aaKnown RBP-1.74□□□□□ -2.69
RNU6-560P-201ENST00000364007 PEG3Q9GZU2 1588 aa-1.75□□□□□ -2.69
RNU6-560P-201ENST00000364007 ATP6V1G2-DDX39BF2Z307 99 aa-1.75□□□□□ -2.69
RNU6-560P-201ENST00000364007 MT1AP04731 61 aa-1.75□□□□□ -2.69
RNU6-560P-201ENST00000364007 LINC00032P0C843 101 aa-1.75□□□□□ -2.69
RNU6-560P-201ENST00000364007 LTN1O94822 1766 aa-1.75□□□□□ -2.69
RNU6-560P-201ENST00000364007 LRRC9Q6ZRR7 1453 aa-1.75□□□□□ -2.69
RNU6-560P-201ENST00000364007 EPRSP07814 1512 aaKnown RBP-1.76□□□□□ -2.69
RNU6-560P-201ENST00000364007 CEP295Q9C0D2 2601 aa-1.76□□□□□ -2.69
RNU6-560P-201ENST00000364007 NDUFA3O95167 84 aa-1.76□□□□□ -2.69
RNU6-560P-201ENST00000364007 TCEAL7Q9BRU2 100 aa-1.76□□□□□ -2.69
RNU6-560P-201ENST00000364007 FANCAO15360 1455 aa-1.76□□□□□ -2.69
RNU6-560P-201ENST00000364007 MYO3AQ8NEV4 1616 aa-1.77□□□□□ -2.69
RNU6-560P-201ENST00000364007 H3BNG1 76 aa-1.77□□□□□ -2.69
RNU6-560P-201ENST00000364007 DPY30Q9C005 99 aa-1.77□□□□□ -2.69
RNU6-560P-201ENST00000364007 RELNP78509 3460 aa-1.78□□□□□ -2.69
RNU6-560P-201ENST00000364007 ACACAQ13085 2346 aa-1.78□□□□□ -2.69
RNU6-560P-201ENST00000364007 SMG1Q96Q15 3661 aaKnown RBP-1.78□□□□□ -2.69
RNU6-560P-201ENST00000364007 UTP20O75691 2785 aaKnown RBP-1.79□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms