RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 KRTAP10-11P60412 298 aa9.69□□□□□ -0.86
LMX1B-201ENST00000355497 A0A087WTM6 91 aa9.69□□□□□ -0.86
LMX1B-201ENST00000355497 ANAPC11Q9NYG5 84 aa9.68□□□□□ -0.86
LMX1B-201ENST00000355497 IGLV7-43P04211 117 aa9.68□□□□□ -0.86
LMX1B-201ENST00000355497 ZNF575Q86XF7 245 aa9.68□□□□□ -0.86
LMX1B-201ENST00000355497 LINC00483Q53H64 154 aa9.67□□□□□ -0.86
LMX1B-201ENST00000355497 Q8N1X5 172 aa9.67□□□□□ -0.86
LMX1B-201ENST00000355497 K7EIL1 84 aa9.66□□□□□ -0.86
LMX1B-201ENST00000355497 C19orf73Q9NVV2 129 aa9.65□□□□□ -0.86
LMX1B-201ENST00000355497 PIEZO2Q9H5I5 2752 aa9.65□□□□□ -0.86
LMX1B-201ENST00000355497 C9orf163Q8N9P6 203 aa9.65□□□□□ -0.86
LMX1B-201ENST00000355497 SPRR4Q96PI1 79 aa9.65□□□□□ -0.86
LMX1B-201ENST00000355497 IGF2RP11717 2491 aa9.64□□□□□ -0.87
LMX1B-201ENST00000355497 Q1T7F1 81 aa9.64□□□□□ -0.87
LMX1B-201ENST00000355497 SMR3BP02814 79 aaPredicted RBP9.63□□□□□ -0.87
LMX1B-201ENST00000355497 A0A1W2PNM2 257 aa9.62□□□□□ -0.87
LMX1B-201ENST00000355497 PSORS1C2Q9UIG4 136 aa9.62□□□□□ -0.87
LMX1B-201ENST00000355497 LINC00612Q8N6U2 182 aa9.61□□□□□ -0.87
LMX1B-201ENST00000355497 NCOR2Q9Y618 2525 aa9.61□□□□□ -0.87
LMX1B-201ENST00000355497 MYO9AB2RTY4 2548 aa9.59□□□□□ -0.87
LMX1B-201ENST00000355497 GIG44P09565 113 aaPredicted RBP9.58□□□□□ -0.88
LMX1B-201ENST00000355497 CNBPP62633 177 aaKnown RBP9.56□□□□□ -0.88
LMX1B-201ENST00000355497 LRRK2Q5S007 2527 aa9.55□□□□□ -0.88
LMX1B-201ENST00000355497 CAMK2N1Q7Z7J9 78 aa9.55□□□□□ -0.88
LMX1B-201ENST00000355497 CASC10Q5T4H9 136 aa9.53□□□□□ -0.88
LMX1B-201ENST00000355497 KRTAP10-3P60369 221 aa9.52□□□□□ -0.89
LMX1B-201ENST00000355497 PRR26Q8N8Z3 221 aa9.48□□□□□ -0.89
LMX1B-201ENST00000355497 FN1P02751 2386 aaKnown RBP9.48□□□□□ -0.89
LMX1B-201ENST00000355497 A0A1B0GU33 70 aa9.48□□□□□ -0.89
LMX1B-201ENST00000355497 A0A0A0MQY5 61 aa9.47□□□□□ -0.89
LMX1B-201ENST00000355497 JMJD1CQ15652 2540 aa9.47□□□□□ -0.89
LMX1B-201ENST00000355497 OCR1Q9BZK8 76 aa9.47□□□□□ -0.89
LMX1B-201ENST00000355497 ABCA12Q86UK0 2595 aa9.47□□□□□ -0.89
LMX1B-201ENST00000355497 Q6ZSA8 131 aa9.45□□□□□ -0.9
LMX1B-201ENST00000355497 H3BS24 57 aa9.43□□□□□ -0.9
LMX1B-201ENST00000355497 WIPF1O43516 503 aa9.43□□□□□ -0.9
LMX1B-201ENST00000355497 IGLV7-46A0A075B6I9 117 aa9.43□□□□□ -0.9
LMX1B-201ENST00000355497 Q75L30 129 aa9.42□□□□□ -0.9
LMX1B-201ENST00000355497 A0A096LNT2 108 aa9.42□□□□□ -0.9
LMX1B-201ENST00000355497 PCSK5Q92824 1860 aa9.41□□□□□ -0.9
LMX1B-201ENST00000355497 TLN1Q9Y490 2541 aaKnown RBP9.4□□□□□ -0.9
LMX1B-201ENST00000355497 HRES1P13985 223 aa9.4□□□□□ -0.9
LMX1B-201ENST00000355497 PIEZO1Q92508 2521 aa9.36□□□□□ -0.91
LMX1B-201ENST00000355497 M0R2T5 61 aa9.36□□□□□ -0.91
LMX1B-201ENST00000355497 DMAC1Q96GE9 116 aa9.34□□□□□ -0.91
LMX1B-201ENST00000355497 PRAC1Q96KF2 57 aa9.33□□□□□ -0.92
LMX1B-201ENST00000355497 S4R3F8 94 aa9.32□□□□□ -0.92
LMX1B-201ENST00000355497 SRCAPQ6ZRS2 3230 aa9.32□□□□□ -0.92
LMX1B-201ENST00000355497 LINC01558Q9Y6Z2 57 aa9.32□□□□□ -0.92
LMX1B-201ENST00000355497 USP9XQ93008 2570 aaPredicted RBP9.31□□□□□ -0.92
LMX1B-201ENST00000355497 ZFYVE26Q68DK2 2539 aa9.3□□□□□ -0.92
LMX1B-201ENST00000355497 ZCCHC13Q8WW36 166 aaKnown RBP9.28□□□□□ -0.92
LMX1B-201ENST00000355497 TNP2Q05952 138 aa9.28□□□□□ -0.92
LMX1B-201ENST00000355497 SPINK7P58062 85 aa9.27□□□□□ -0.93
LMX1B-201ENST00000355497 TLN2Q9Y4G6 2542 aa9.27□□□□□ -0.93
LMX1B-201ENST00000355497 CSAG1Q6PB30 78 aa9.27□□□□□ -0.93
LMX1B-201ENST00000355497 MMP24-AS1A0A0U1RRL7 71 aa9.27□□□□□ -0.93
LMX1B-201ENST00000355497 FAM229BQ4G0N7 80 aa9.26□□□□□ -0.93
LMX1B-201ENST00000355497 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.26□□□□□ -0.93
LMX1B-201ENST00000355497 ZNF462Q96JM2 2506 aa9.25□□□□□ -0.93
LMX1B-201ENST00000355497 Q8N9P0 234 aaPredicted RBP9.25□□□□□ -0.93
LMX1B-201ENST00000355497 PKD1L2Q7Z442 2459 aa9.22□□□□□ -0.93
LMX1B-201ENST00000355497 Q5XG85 94 aa9.21□□□□□ -0.94
LMX1B-201ENST00000355497 F8P00451 2351 aa9.2□□□□□ -0.94
LMX1B-201ENST00000355497 KRTAP1-3Q8IUG1 177 aa9.17□□□□□ -0.94
LMX1B-201ENST00000355497 Q5W150 140 aa9.17□□□□□ -0.94
LMX1B-201ENST00000355497 SETD2Q9BYW2 2564 aaPredicted RBP9.17□□□□□ -0.94
LMX1B-201ENST00000355497 Q5VV11 94 aa9.16□□□□□ -0.94
LMX1B-201ENST00000355497 PLAC8Q9NZF1 115 aa9.15□□□□□ -0.94
LMX1B-201ENST00000355497 FP248Q71RG6 208 aaPredicted RBP9.13□□□□□ -0.95
LMX1B-201ENST00000355497 R4GN34 69 aa9.13□□□□□ -0.95
LMX1B-201ENST00000355497 ANKRD17O75179 2603 aaKnown RBP9.13□□□□□ -0.95
LMX1B-201ENST00000355497 KRTAP1-1Q07627 177 aa9.13□□□□□ -0.95
LMX1B-201ENST00000355497 ROMO1P60602 79 aa9.13□□□□□ -0.95
LMX1B-201ENST00000355497 GOLGB1Q14789 3259 aaKnown RBP9.11□□□□□ -0.95
LMX1B-201ENST00000355497 SPRR1AP35321 89 aa9.1□□□□□ -0.95
LMX1B-201ENST00000355497 USP9YO00507 2555 aaPredicted RBP9.1□□□□□ -0.95
LMX1B-201ENST00000355497 ANKRD11Q6UB99 2663 aaPredicted RBP9.09□□□□□ -0.95
LMX1B-201ENST00000355497 CR1P17927 2039 aa9.08□□□□□ -0.96
LMX1B-201ENST00000355497 WDR87Q6ZQQ6 2873 aa9.08□□□□□ -0.96
LMX1B-201ENST00000355497 LINC00472Q9H8W2 130 aa9.07□□□□□ -0.96
LMX1B-201ENST00000355497 CYSTM1Q9H1C7 97 aa9.07□□□□□ -0.96
LMX1B-201ENST00000355497 Q8NDZ9 215 aa9.05□□□□□ -0.96
LMX1B-201ENST00000355497 SPRR1BP22528 89 aa9.05□□□□□ -0.96
LMX1B-201ENST00000355497 RPL37P61927 97 aaKnown RBP9.05□□□□□ -0.96
LMX1B-201ENST00000355497 H1FX-AS1Q4G0G2 97 aa9.04□□□□□ -0.96
LMX1B-201ENST00000355497 MTORP42345 2549 aa9.02□□□□□ -0.97
LMX1B-201ENST00000355497 CEP295Q9C0D2 2601 aa8.99□□□□□ -0.97
LMX1B-201ENST00000355497 SEC61BP60468 96 aaKnown RBP8.99□□□□□ -0.97
LMX1B-201ENST00000355497 M0QZ58 72 aa8.98□□□□□ -0.97
LMX1B-201ENST00000355497 CHD8Q9HCK8 2581 aa8.96□□□□□ -0.97
LMX1B-201ENST00000355497 KRTAP26-1Q6PEX3 210 aa8.96□□□□□ -0.98
LMX1B-201ENST00000355497 POLQO75417 2590 aa8.94□□□□□ -0.98
LMX1B-201ENST00000355497 ACANP16112 2415 aa8.93□□□□□ -0.98
LMX1B-201ENST00000355497 PLAC4Q8WY50 150 aa8.93□□□□□ -0.98
LMX1B-201ENST00000355497 KRTAP16-1A8MUX0 517 aa8.9□□□□□ -0.99
LMX1B-201ENST00000355497 CENPFP49454 3210 aa8.89□□□□□ -0.99
LMX1B-201ENST00000355497 Q5VSD8 79 aa8.87□□□□□ -0.99
LMX1B-201ENST00000355497 ADM2Q7Z4H4 148 aa8.87□□□□□ -0.99
LMX1B-201ENST00000355497 SPTBN4Q9H254 2564 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms