RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 KCNQ1DNQ9H478 68 aa8.61□□□□□ -1.03
CDC42-202ENST00000344548 HECTD4Q9Y4D8 3996 aa8.61□□□□□ -1.03
CDC42-202ENST00000344548 ELOF1P60002 83 aaKnown RBP8.61□□□□□ -1.03
CDC42-202ENST00000344548 MRPL55Q7Z7F7 128 aaKnown RBP8.6□□□□□ -1.03
CDC42-202ENST00000344548 hADV29S1A0JD25 119 aa8.6□□□□□ -1.03
CDC42-202ENST00000344548 COX7BP24311 80 aa8.6□□□□□ -1.03
CDC42-202ENST00000344548 ALMS1Q8TCU4 4167 aa8.59□□□□□ -1.03
CDC42-202ENST00000344548 A0A1B0GV72 72 aa8.59□□□□□ -1.03
CDC42-202ENST00000344548 C1orf134Q5TEV5 83 aa8.59□□□□□ -1.03
CDC42-202ENST00000344548 KRTAP11-1Q8IUC1 163 aa8.59□□□□□ -1.03
CDC42-202ENST00000344548 LINC00528Q8N1L1 170 aa8.59□□□□□ -1.03
CDC42-202ENST00000344548 DNAH6Q9C0G6 4158 aa8.59□□□□□ -1.03
CDC42-202ENST00000344548 A0A1B0GX51 115 aa8.58□□□□□ -1.04
CDC42-202ENST00000344548 KRTAP4-16G5E9R7 235 aaPredicted RBP8.58□□□□□ -1.04
CDC42-202ENST00000344548 Q6ZQY7 126 aa8.57□□□□□ -1.04
CDC42-202ENST00000344548 ORMDL1Q9P0S3 153 aa8.57□□□□□ -1.04
CDC42-202ENST00000344548 TNP2Q05952 138 aa8.57□□□□□ -1.04
CDC42-202ENST00000344548 VPS25Q9BRG1 176 aa8.57□□□□□ -1.04
CDC42-202ENST00000344548 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.57□□□□□ -1.04
CDC42-202ENST00000344548 FRAS1Q86XX4 4008 aa8.56□□□□□ -1.04
CDC42-202ENST00000344548 C3orf84H3BNL1 204 aa8.56□□□□□ -1.04
CDC42-202ENST00000344548 SPRR1AP35321 89 aa8.56□□□□□ -1.04
CDC42-202ENST00000344548 PHF5AQ7RTV0 110 aaKnown RBP8.56□□□□□ -1.04
CDC42-202ENST00000344548 TRBV7-6A0A0J9YX20 115 aa8.55□□□□□ -1.04
CDC42-202ENST00000344548 J3QR89 54 aa8.55□□□□□ -1.04
CDC42-202ENST00000344548 DNAH11Q96DT5 4516 aa8.54□□□□□ -1.04
CDC42-202ENST00000344548 RTL8CO15255 209 aa8.54□□□□□ -1.04
CDC42-202ENST00000344548 Q9BRP9 147 aa8.54□□□□□ -1.04
CDC42-202ENST00000344548 FAT2Q9NYQ8 4349 aa8.54□□□□□ -1.04
CDC42-202ENST00000344548 SACSQ9NZJ4 4579 aa8.54□□□□□ -1.04
CDC42-202ENST00000344548 CDIP1Q9H305 208 aa8.54□□□□□ -1.04
CDC42-202ENST00000344548 B5MCH6 92 aa8.53□□□□□ -1.04
CDC42-202ENST00000344548 OBSCN-AS1Q96MR7 158 aa8.53□□□□□ -1.04
CDC42-202ENST00000344548 C14orf132Q9NPU4 83 aa8.52□□□□□ -1.04
CDC42-202ENST00000344548 PRYO14603 147 aa8.52□□□□□ -1.05
CDC42-202ENST00000344548 Q6ZRX8 168 aa8.51□□□□□ -1.05
CDC42-202ENST00000344548 TMEM256-PLSCR3K7ERE1 68 aa8.51□□□□□ -1.05
CDC42-202ENST00000344548 DNAH5Q8TE73 4624 aa8.51□□□□□ -1.05
CDC42-202ENST00000344548 SRRM2Q9UQ35 2752 aaKnown RBP8.51□□□□□ -1.05
CDC42-202ENST00000344548 ERC2-IT1O76042 136 aa8.5□□□□□ -1.05
CDC42-202ENST00000344548 REG3GQ6UW15 175 aa8.5□□□□□ -1.05
CDC42-202ENST00000344548 SPACA4Q8TDM5 124 aa8.5□□□□□ -1.05
CDC42-202ENST00000344548 KRTAP10-2P60368 255 aa8.5□□□□□ -1.05
CDC42-202ENST00000344548 DNAH8Q96JB1 4490 aa8.49□□□□□ -1.05
CDC42-202ENST00000344548 DPH3Q96FX2 82 aa8.49□□□□□ -1.05
CDC42-202ENST00000344548 ETDCA0A1B0GVM5 59 aa8.49□□□□□ -1.05
CDC42-202ENST00000344548 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.49□□□□□ -1.05
CDC42-202ENST00000344548 SNCGO76070 127 aa8.48□□□□□ -1.05
CDC42-202ENST00000344548 PRLHP81277 87 aa8.48□□□□□ -1.05
CDC42-202ENST00000344548 ST20-AS1Q8NBB2 130 aa8.48□□□□□ -1.05
CDC42-202ENST00000344548 PKD1P98161 4303 aa8.48□□□□□ -1.05
CDC42-202ENST00000344548 IGLV5-52A0A0A0MRZ9 124 aa8.47□□□□□ -1.05
CDC42-202ENST00000344548 LINC01547P58512 204 aaPredicted RBP8.46□□□□□ -1.05
CDC42-202ENST00000344548 DEFB105AQ8NG35 78 aa8.46□□□□□ -1.05
CDC42-202ENST00000344548 UBE2BP63146 152 aa8.46□□□□□ -1.06
CDC42-202ENST00000344548 SMCR5Q8TEV8 140 aa8.46□□□□□ -1.06
CDC42-202ENST00000344548 XGP55808 180 aa8.45□□□□□ -1.06
CDC42-202ENST00000344548 LINC00474Q9P2X8 69 aa8.45□□□□□ -1.06
CDC42-202ENST00000344548 EPM2AB3EWF7 344 aa8.45□□□□□ -1.06
CDC42-202ENST00000344548 Q8N377 158 aa8.45□□□□□ -1.06
CDC42-202ENST00000344548 LAMTOR3Q9UHA4 124 aa8.45□□□□□ -1.06
CDC42-202ENST00000344548 INAFM2P0DMQ5 153 aa8.44□□□□□ -1.06
CDC42-202ENST00000344548 GAGE2AQ6NT46 116 aa8.44□□□□□ -1.06
CDC42-202ENST00000344548 FAM19A1Q7Z5A9 133 aa8.44□□□□□ -1.06
CDC42-202ENST00000344548 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
CDC42-202ENST00000344548 MT-ATP8P03928 68 aa8.42□□□□□ -1.06
CDC42-202ENST00000344548 FAM30AQ9NZY2 134 aa8.42□□□□□ -1.06
CDC42-202ENST00000344548 DHRS4-AS1Q9P1J3 65 aa8.42□□□□□ -1.06
CDC42-202ENST00000344548 JMJD7-PLA2G4BH0Y9G9 81 aa8.42□□□□□ -1.06
CDC42-202ENST00000344548 PKIGQ9Y2B9 76 aa8.41□□□□□ -1.06
CDC42-202ENST00000344548 NDUFV3P56181 108 aaKnown RBP8.41□□□□□ -1.06
CDC42-202ENST00000344548 FAM240AA0A1B0GVK7 77 aa8.4□□□□□ -1.06
CDC42-202ENST00000344548 RBM3P98179 157 aaKnown RBP8.4□□□□□ -1.06
CDC42-202ENST00000344548 HIGD2AQ9BW72 106 aa8.4□□□□□ -1.06
CDC42-202ENST00000344548 KMT2CQ8NEZ4 4911 aaKnown RBP8.39□□□□□ -1.07
CDC42-202ENST00000344548 HAMPP81172 84 aa8.38□□□□□ -1.07
CDC42-202ENST00000344548 SIGMAR1Q99720 223 aa8.38□□□□□ -1.07
CDC42-202ENST00000344548 PLAC8Q9NZF1 115 aa8.38□□□□□ -1.07
CDC42-202ENST00000344548 CCKP06307 115 aa8.38□□□□□ -1.07
CDC42-202ENST00000344548 Q6ZQT0 140 aa8.38□□□□□ -1.07
CDC42-202ENST00000344548 LINC00846Q9NV44 126 aa8.38□□□□□ -1.07
CDC42-202ENST00000344548 IGLV5-48A0A075B6I7 105 aa8.37□□□□□ -1.07
CDC42-202ENST00000344548 KRTAP10-1P60331 282 aa8.37□□□□□ -1.07
CDC42-202ENST00000344548 LCE6AA0A183 80 aa8.36□□□□□ -1.07
CDC42-202ENST00000344548 PKHD1P08F94 4074 aa8.36□□□□□ -1.07
CDC42-202ENST00000344548 KRTAP13-1Q8IUC0 172 aa8.36□□□□□ -1.07
CDC42-202ENST00000344548 TRBV7-4A0A0J9YYF1 115 aa8.35□□□□□ -1.07
CDC42-202ENST00000344548 SMIM29Q86T20 159 aa8.35□□□□□ -1.07
CDC42-202ENST00000344548 LRP1BQ9NZR2 4599 aa8.35□□□□□ -1.07
CDC42-202ENST00000344548 PSORS1C2Q9UIG4 136 aa8.34□□□□□ -1.07
CDC42-202ENST00000344548 LOC110117498A0A087WWA1 95 aa8.34□□□□□ -1.07
CDC42-202ENST00000344548 H3BQ85 93 aa8.34□□□□□ -1.07
CDC42-202ENST00000344548 BCE1O60756 84 aa8.34□□□□□ -1.07
CDC42-202ENST00000344548 ACYP1P07311 99 aa8.34□□□□□ -1.07
CDC42-202ENST00000344548 CIRBP-AS1Q8TBR5 109 aa8.34□□□□□ -1.07
CDC42-202ENST00000344548 DSCR8Q96T75 97 aa8.33□□□□□ -1.08
CDC42-202ENST00000344548 UBE2AP49459 152 aa8.33□□□□□ -1.08
CDC42-202ENST00000344548 A0A0G2JQZ4 141 aa8.32□□□□□ -1.08
CDC42-202ENST00000344548 H0Y9J4 135 aa8.32□□□□□ -1.08
CDC42-202ENST00000344548 RYR2Q92736 4967 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms