RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ATOX1O00244 68 aa13.1□□□□□ -0.31
RIPPLY3-201ENST00000329553 Q6ZRN7 208 aaPredicted RBP13.1□□□□□ -0.31
RIPPLY3-201ENST00000329553 M0R378 163 aa13.08□□□□□ -0.32
RIPPLY3-201ENST00000329553 COX7CP15954 63 aa13.08□□□□□ -0.32
RIPPLY3-201ENST00000329553 TGP01266 2768 aa13.07□□□□□ -0.32
RIPPLY3-201ENST00000329553 LRCOL1A6NCL2 159 aa13.07□□□□□ -0.32
RIPPLY3-201ENST00000329553 CNBPP62633 177 aaKnown RBP13.07□□□□□ -0.32
RIPPLY3-201ENST00000329553 C9orf153Q5TBE3 101 aa13.07□□□□□ -0.32
RIPPLY3-201ENST00000329553 SERTAD4-AS1Q5TG53 156 aa13.07□□□□□ -0.32
RIPPLY3-201ENST00000329553 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.05□□□□□ -0.32
RIPPLY3-201ENST00000329553 LOC107984640A0A0U1RRK4 108 aa13.05□□□□□ -0.32
RIPPLY3-201ENST00000329553 C14orf177Q52M58 125 aa13.05□□□□□ -0.32
RIPPLY3-201ENST00000329553 A0A087WVE0 104 aa13.05□□□□□ -0.32
RIPPLY3-201ENST00000329553 WWC2-AS2Q96NR7 200 aa13.05□□□□□ -0.32
RIPPLY3-201ENST00000329553 ATP5EP2Q5VTU8 51 aa13.04□□□□□ -0.32
RIPPLY3-201ENST00000329553 RBM3P98179 157 aaKnown RBP13.04□□□□□ -0.32
RIPPLY3-201ENST00000329553 TRAV23DV6A0A075B6W5 121 aa13.03□□□□□ -0.32
RIPPLY3-201ENST00000329553 FAM168BA1KXE4 195 aa13.03□□□□□ -0.32
RIPPLY3-201ENST00000329553 Q6ZQT0 140 aa13.03□□□□□ -0.32
RIPPLY3-201ENST00000329553 PLA2G2DQ9UNK4 145 aa13.03□□□□□ -0.32
RIPPLY3-201ENST00000329553 LOC110117498A0A087WWA1 95 aa13.03□□□□□ -0.32
RIPPLY3-201ENST00000329553 KMT2AQ03164 3969 aa13.02□□□□□ -0.33
RIPPLY3-201ENST00000329553 Q6ZR54 194 aa13.01□□□□□ -0.33
RIPPLY3-201ENST00000329553 DIRC1Q969H9 104 aa13.01□□□□□ -0.33
RIPPLY3-201ENST00000329553 H3BQ85 93 aa13.01□□□□□ -0.33
RIPPLY3-201ENST00000329553 Q6ZQY7 126 aa13.01□□□□□ -0.33
RIPPLY3-201ENST00000329553 NKAPP1Q8N9T2 125 aa13.01□□□□□ -0.33
RIPPLY3-201ENST00000329553 KRTAP7-1Q8IUC3 87 aa13□□□□□ -0.33
RIPPLY3-201ENST00000329553 CRYGAP11844 174 aa13□□□□□ -0.33
RIPPLY3-201ENST00000329553 LAMTOR3Q9UHA4 124 aa13□□□□□ -0.33
RIPPLY3-201ENST00000329553 ZNF73O43830 326 aaPredicted RBP12.98□□□□□ -0.33
RIPPLY3-201ENST00000329553 C7orf33Q8WU49 177 aa12.98□□□□□ -0.33
RIPPLY3-201ENST00000329553 UBL5Q9BZL1 73 aa12.98□□□□□ -0.33
RIPPLY3-201ENST00000329553 LY6G6CO95867 125 aa12.97□□□□□ -0.33
RIPPLY3-201ENST00000329553 IGLV5-37A0A075B6J1 123 aa12.97□□□□□ -0.33
RIPPLY3-201ENST00000329553 A0A096LNI7 61 aa12.97□□□□□ -0.33
RIPPLY3-201ENST00000329553 TRBV7-6A0A0J9YX20 115 aa12.97□□□□□ -0.33
RIPPLY3-201ENST00000329553 ELOF1P60002 83 aaKnown RBP12.96□□□□□ -0.33
RIPPLY3-201ENST00000329553 SERP2Q8N6R1 65 aa12.96□□□□□ -0.33
RIPPLY3-201ENST00000329553 SMIM20Q8N5G0 67 aa12.96□□□□□ -0.34
RIPPLY3-201ENST00000329553 C16orf90A8MZG2 172 aa12.95□□□□□ -0.34
RIPPLY3-201ENST00000329553 COX7BP24311 80 aa12.95□□□□□ -0.34
RIPPLY3-201ENST00000329553 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.95□□□□□ -0.34
RIPPLY3-201ENST00000329553 FAM19A5Q7Z5A7 132 aaPredicted RBP12.94□□□□□ -0.34
RIPPLY3-201ENST00000329553 IGKV2-24A0A0C4DH68 120 aa12.94□□□□□ -0.34
RIPPLY3-201ENST00000329553 C9orf163Q8N9P6 203 aa12.94□□□□□ -0.34
RIPPLY3-201ENST00000329553 PDE6GP18545 87 aa12.93□□□□□ -0.34
RIPPLY3-201ENST00000329553 DSCR8Q96T75 97 aa12.93□□□□□ -0.34
RIPPLY3-201ENST00000329553 KCNQ1DNQ9H478 68 aa12.92□□□□□ -0.34
RIPPLY3-201ENST00000329553 DNAH2Q9P225 4427 aa12.92□□□□□ -0.34
RIPPLY3-201ENST00000329553 A0A087WTM6 91 aa12.92□□□□□ -0.34
RIPPLY3-201ENST00000329553 FAM19A1Q7Z5A9 133 aa12.92□□□□□ -0.34
RIPPLY3-201ENST00000329553 LINC00476Q8WZB0 136 aa12.92□□□□□ -0.34
RIPPLY3-201ENST00000329553 RPL37AP8A6NKH3 93 aa12.91□□□□□ -0.34
RIPPLY3-201ENST00000329553 IGLV1-50A0A075B6I6 118 aa12.89□□□□□ -0.35
RIPPLY3-201ENST00000329553 MRPL55Q7Z7F7 128 aaKnown RBP12.89□□□□□ -0.35
RIPPLY3-201ENST00000329553 A0A1W2PNN7 141 aa12.89□□□□□ -0.35
RIPPLY3-201ENST00000329553 GHRHP01286 108 aa12.89□□□□□ -0.35
RIPPLY3-201ENST00000329553 CHTF8P0CG12 524 aa12.88□□□□□ -0.35
RIPPLY3-201ENST00000329553 C1orf134Q5TEV5 83 aa12.88□□□□□ -0.35
RIPPLY3-201ENST00000329553 TRBV7-4A0A0J9YYF1 115 aa12.88□□□□□ -0.35
RIPPLY3-201ENST00000329553 CYSTM1Q9H1C7 97 aa12.88□□□□□ -0.35
RIPPLY3-201ENST00000329553 C3orf84H3BNL1 204 aa12.86□□□□□ -0.35
RIPPLY3-201ENST00000329553 LINC00528Q8N1L1 170 aa12.86□□□□□ -0.35
RIPPLY3-201ENST00000329553 Q6ZVQ6 151 aa12.86□□□□□ -0.35
RIPPLY3-201ENST00000329553 LINC01547P58512 204 aaPredicted RBP12.85□□□□□ -0.35
RIPPLY3-201ENST00000329553 DNAH6Q9C0G6 4158 aa12.85□□□□□ -0.35
RIPPLY3-201ENST00000329553 FUSP35637 526 aaKnown RBP eCLIP12.83□□□□□ -0.36
RIPPLY3-201ENST00000329553 PRYO14603 147 aa12.82□□□□□ -0.36
RIPPLY3-201ENST00000329553 SVIPQ8NHG7 77 aa12.82□□□□□ -0.36
RIPPLY3-201ENST00000329553 SPRR1AP35321 89 aa12.81□□□□□ -0.36
RIPPLY3-201ENST00000329553 KRTAP4-16G5E9R7 235 aaPredicted RBP12.81□□□□□ -0.36
RIPPLY3-201ENST00000329553 PKIGQ9Y2B9 76 aa12.81□□□□□ -0.36
RIPPLY3-201ENST00000329553 ALMS1Q8TCU4 4167 aa12.81□□□□□ -0.36
RIPPLY3-201ENST00000329553 CXCL6P80162 114 aa12.8□□□□□ -0.36
RIPPLY3-201ENST00000329553 HAMPP81172 84 aa12.8□□□□□ -0.36
RIPPLY3-201ENST00000329553 PANO1I0J062 215 aa12.79□□□□□ -0.36
RIPPLY3-201ENST00000329553 DNAH17Q9UFH2 4485 aa12.79□□□□□ -0.36
RIPPLY3-201ENST00000329553 BCE1O60756 84 aa12.77□□□□□ -0.36
RIPPLY3-201ENST00000329553 LINC00474Q9P2X8 69 aa12.77□□□□□ -0.36
RIPPLY3-201ENST00000329553 RTL8CO15255 209 aa12.77□□□□□ -0.37
RIPPLY3-201ENST00000329553 ETDCA0A1B0GVM5 59 aa12.76□□□□□ -0.37
RIPPLY3-201ENST00000329553 TMEM258P61165 79 aa12.76□□□□□ -0.37
RIPPLY3-201ENST00000329553 HECTD4Q9Y4D8 3996 aa12.76□□□□□ -0.37
RIPPLY3-201ENST00000329553 Q6ZRX8 168 aa12.76□□□□□ -0.37
RIPPLY3-201ENST00000329553 REG3GQ6UW15 175 aa12.75□□□□□ -0.37
RIPPLY3-201ENST00000329553 PHF5AQ7RTV0 110 aaKnown RBP12.75□□□□□ -0.37
RIPPLY3-201ENST00000329553 HYDINQ4G0P3 5121 aa12.74□□□□□ -0.37
RIPPLY3-201ENST00000329553 TNP2Q05952 138 aa12.74□□□□□ -0.37
RIPPLY3-201ENST00000329553 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.74□□□□□ -0.37
RIPPLY3-201ENST00000329553 DPH3Q96FX2 82 aa12.73□□□□□ -0.37
RIPPLY3-201ENST00000329553 Q9BRP9 147 aa12.73□□□□□ -0.37
RIPPLY3-201ENST00000329553 KRTAP11-1Q8IUC1 163 aa12.72□□□□□ -0.37
RIPPLY3-201ENST00000329553 J3KT08 172 aa12.71□□□□□ -0.37
RIPPLY3-201ENST00000329553 RPS28P62857 69 aaKnown RBP12.71□□□□□ -0.37
RIPPLY3-201ENST00000329553 SPACA4Q8TDM5 124 aa12.71□□□□□ -0.37
RIPPLY3-201ENST00000329553 DHRS4-AS1Q9P1J3 65 aa12.7□□□□□ -0.38
RIPPLY3-201ENST00000329553 IGLV5-52A0A0A0MRZ9 124 aa12.69□□□□□ -0.38
RIPPLY3-201ENST00000329553 TRAV7A0A075B6U4 112 aa12.69□□□□□ -0.38
RIPPLY3-201ENST00000329553 UBE2BP63146 152 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms