RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 LINC00643Q86TS7 51 aa12.45□□□□□ -0.42
CHMP6-201ENST00000325167 STARD9Q9P2P6 4700 aa12.44□□□□□ -0.42
CHMP6-201ENST00000325167 C21orf62-AS1Q17RA5 79 aa12.44□□□□□ -0.42
CHMP6-201ENST00000325167 SDIM1Q6ZPB5 146 aa12.44□□□□□ -0.42
CHMP6-201ENST00000325167 C16orf90A8MZG2 172 aa12.43□□□□□ -0.42
CHMP6-201ENST00000325167 CCKP06307 115 aa12.42□□□□□ -0.42
CHMP6-201ENST00000325167 IGLV1-50A0A075B6I6 118 aa12.42□□□□□ -0.42
CHMP6-201ENST00000325167 PDE6GP18545 87 aa12.42□□□□□ -0.42
CHMP6-201ENST00000325167 RBM3P98179 157 aaKnown RBP12.42□□□□□ -0.42
CHMP6-201ENST00000325167 MRPL55Q7Z7F7 128 aaKnown RBP12.42□□□□□ -0.42
CHMP6-201ENST00000325167 LAMTOR3Q9UHA4 124 aa12.42□□□□□ -0.42
CHMP6-201ENST00000325167 TENM2Q9NT68 2774 aa12.41□□□□□ -0.42
CHMP6-201ENST00000325167 DHRS4-AS1Q9P1J3 65 aa12.4□□□□□ -0.42
CHMP6-201ENST00000325167 IMUPQ9GZP8 106 aa12.39□□□□□ -0.43
CHMP6-201ENST00000325167 RYR2Q92736 4967 aa12.39□□□□□ -0.43
CHMP6-201ENST00000325167 LOC110117498A0A087WWA1 95 aa12.38□□□□□ -0.43
CHMP6-201ENST00000325167 SPRR1AP35321 89 aa12.38□□□□□ -0.43
CHMP6-201ENST00000325167 SACSQ9NZJ4 4579 aa12.38□□□□□ -0.43
CHMP6-201ENST00000325167 TRBV7-7A0A0K0K1E9 115 aa12.37□□□□□ -0.43
CHMP6-201ENST00000325167 FAM168BA1KXE4 195 aa12.37□□□□□ -0.43
CHMP6-201ENST00000325167 FAM19A5Q7Z5A7 132 aaPredicted RBP12.37□□□□□ -0.43
CHMP6-201ENST00000325167 ETDCA0A1B0GVM5 59 aa12.36□□□□□ -0.43
CHMP6-201ENST00000325167 DSCR8Q96T75 97 aa12.36□□□□□ -0.43
CHMP6-201ENST00000325167 LYSTQ99698 3801 aa12.36□□□□□ -0.43
CHMP6-201ENST00000325167 LRCOL1A6NCL2 159 aa12.35□□□□□ -0.43
CHMP6-201ENST00000325167 Q6ZRX8 168 aa12.35□□□□□ -0.43
CHMP6-201ENST00000325167 KRTAP4-16G5E9R7 235 aaPredicted RBP12.34□□□□□ -0.43
CHMP6-201ENST00000325167 Q6ZRN7 208 aaPredicted RBP12.34□□□□□ -0.43
CHMP6-201ENST00000325167 KRTAP7-1Q8IUC3 87 aa12.34□□□□□ -0.43
CHMP6-201ENST00000325167 A0A096LNI7 61 aa12.33□□□□□ -0.44
CHMP6-201ENST00000325167 RPL37AP8A6NKH3 93 aa12.33□□□□□ -0.44
CHMP6-201ENST00000325167 B5MCH6 92 aa12.33□□□□□ -0.44
CHMP6-201ENST00000325167 SMCR5Q8TEV8 140 aa12.33□□□□□ -0.44
CHMP6-201ENST00000325167 LINC00474Q9P2X8 69 aa12.33□□□□□ -0.44
CHMP6-201ENST00000325167 C9orf163Q8N9P6 203 aa12.32□□□□□ -0.44
CHMP6-201ENST00000325167 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.32□□□□□ -0.44
CHMP6-201ENST00000325167 A0A1B0GV72 72 aa12.32□□□□□ -0.44
CHMP6-201ENST00000325167 Q6ZQT0 140 aa12.32□□□□□ -0.44
CHMP6-201ENST00000325167 NDUFV3P56181 108 aaKnown RBP12.31□□□□□ -0.44
CHMP6-201ENST00000325167 LCE6AA0A183 80 aa12.3□□□□□ -0.44
CHMP6-201ENST00000325167 REG3GQ6UW15 175 aa12.3□□□□□ -0.44
CHMP6-201ENST00000325167 LINC00846Q9NV44 126 aa12.3□□□□□ -0.44
CHMP6-201ENST00000325167 IGKV2-24A0A0C4DH68 120 aa12.29□□□□□ -0.44
CHMP6-201ENST00000325167 Q6JHZ5 121 aa12.29□□□□□ -0.44
CHMP6-201ENST00000325167 PLECQ15149 4684 aaKnown RBP12.27□□□□□ -0.44
CHMP6-201ENST00000325167 TRBV7-4A0A0J9YYF1 115 aa12.26□□□□□ -0.45
CHMP6-201ENST00000325167 ATP5EP2Q5VTU8 51 aa12.26□□□□□ -0.45
CHMP6-201ENST00000325167 HYDINQ4G0P3 5121 aa12.26□□□□□ -0.45
CHMP6-201ENST00000325167 UBL5Q9BZL1 73 aa12.26□□□□□ -0.45
CHMP6-201ENST00000325167 A0A1W2PNN7 141 aa12.23□□□□□ -0.45
CHMP6-201ENST00000325167 Q6ZR54 194 aa12.23□□□□□ -0.45
CHMP6-201ENST00000325167 Q9BRP9 147 aa12.23□□□□□ -0.45
CHMP6-201ENST00000325167 M0R2N4 97 aa12.22□□□□□ -0.45
CHMP6-201ENST00000325167 IGLV5-48A0A075B6I7 105 aa12.22□□□□□ -0.45
CHMP6-201ENST00000325167 UBE2BP63146 152 aa12.22□□□□□ -0.45
CHMP6-201ENST00000325167 VPS13DQ5THJ4 4388 aa12.22□□□□□ -0.45
CHMP6-201ENST00000325167 A0A087WTM6 91 aa12.21□□□□□ -0.45
CHMP6-201ENST00000325167 Q8N377 158 aa12.2□□□□□ -0.46
CHMP6-201ENST00000325167 ANAPC13Q9BS18 74 aa12.19□□□□□ -0.46
CHMP6-201ENST00000325167 EPPK1P58107 5090 aaKnown RBP12.18□□□□□ -0.46
CHMP6-201ENST00000325167 LINC01547P58512 204 aaPredicted RBP12.17□□□□□ -0.46
CHMP6-201ENST00000325167 DEFB105AQ8NG35 78 aa12.17□□□□□ -0.46
CHMP6-201ENST00000325167 ALMS1Q8TCU4 4167 aa12.17□□□□□ -0.46
CHMP6-201ENST00000325167 DNAH10Q8IVF4 4471 aa12.16□□□□□ -0.46
CHMP6-201ENST00000325167 A0A1B0GW54 56 aa12.16□□□□□ -0.46
CHMP6-201ENST00000325167 H0Y9J4 135 aa12.16□□□□□ -0.46
CHMP6-201ENST00000325167 CHTF8P0CG12 524 aa12.16□□□□□ -0.46
CHMP6-201ENST00000325167 FAM19A1Q7Z5A9 133 aa12.16□□□□□ -0.46
CHMP6-201ENST00000325167 C1orf134Q5TEV5 83 aa12.14□□□□□ -0.47
CHMP6-201ENST00000325167 IGKV3D-7A0A0C4DH55 119 aa12.13□□□□□ -0.47
CHMP6-201ENST00000325167 PHF5AQ7RTV0 110 aaKnown RBP12.12□□□□□ -0.47
CHMP6-201ENST00000325167 FAM236AA0A1B0GUQ0 79 aa12.11□□□□□ -0.47
CHMP6-201ENST00000325167 FAM236BA0A1B0GV22 79 aa12.11□□□□□ -0.47
CHMP6-201ENST00000325167 EPM2AB3EWF7 344 aa12.11□□□□□ -0.47
CHMP6-201ENST00000325167 SPACA4Q8TDM5 124 aa12.11□□□□□ -0.47
CHMP6-201ENST00000325167 ERC2-IT1O76042 136 aa12.1□□□□□ -0.47
CHMP6-201ENST00000325167 ST20-AS1Q8NBB2 130 aa12.1□□□□□ -0.47
CHMP6-201ENST00000325167 LINC00476Q8WZB0 136 aa12.1□□□□□ -0.47
CHMP6-201ENST00000325167 DPH3Q96FX2 82 aa12.1□□□□□ -0.47
CHMP6-201ENST00000325167 RTL8CO15255 209 aa12.09□□□□□ -0.47
CHMP6-201ENST00000325167 LY6G6CO95867 125 aa12.09□□□□□ -0.47
CHMP6-201ENST00000325167 TNP2Q05952 138 aa12.09□□□□□ -0.47
CHMP6-201ENST00000325167 Q6ZVQ6 151 aa12.09□□□□□ -0.47
CHMP6-201ENST00000325167 F8WEM9 126 aa12.07□□□□□ -0.48
CHMP6-201ENST00000325167 FUSP35637 526 aaKnown RBP eCLIP12.07□□□□□ -0.48
CHMP6-201ENST00000325167 CXCL6P80162 114 aa12.06□□□□□ -0.48
CHMP6-201ENST00000325167 PRLHP81277 87 aa12.06□□□□□ -0.48
CHMP6-201ENST00000325167 HIST1H4AP62805 103 aaKnown RBP12.05□□□□□ -0.48
CHMP6-201ENST00000325167 HIGD2AQ9BW72 106 aa12.05□□□□□ -0.48
CHMP6-201ENST00000325167 BCE1O60756 84 aa12.04□□□□□ -0.48
CHMP6-201ENST00000325167 UBE2AP49459 152 aa12.04□□□□□ -0.48
CHMP6-201ENST00000325167 ATOX1O00244 68 aa12.03□□□□□ -0.48
CHMP6-201ENST00000325167 C1orf137Q5JT78 98 aa12.03□□□□□ -0.48
CHMP6-201ENST00000325167 BIRC6Q9NR09 4857 aa12.03□□□□□ -0.48
CHMP6-201ENST00000325167 KMT2AQ03164 3969 aa12.02□□□□□ -0.48
CHMP6-201ENST00000325167 IGLV5-52A0A0A0MRZ9 124 aa12.02□□□□□ -0.49
CHMP6-201ENST00000325167 HAMPP81172 84 aa12.02□□□□□ -0.49
CHMP6-201ENST00000325167 C3orf22Q8N5N4 141 aa12.01□□□□□ -0.49
CHMP6-201ENST00000325167 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.01□□□□□ -0.49
CHMP6-201ENST00000325167 PANO1I0J062 215 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms