RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 TMEM256-PLSCR3K7ERE1 68 aa11.38□□□□□ -0.59
RAB39A-201ENST00000320578 INAFM2P0DMQ5 153 aa11.37□□□□□ -0.59
RAB39A-201ENST00000320578 SPRR1AP35321 89 aa11.37□□□□□ -0.59
RAB39A-201ENST00000320578 SDIM1Q6ZPB5 146 aa11.37□□□□□ -0.59
RAB39A-201ENST00000320578 LINC00528Q8N1L1 170 aa11.37□□□□□ -0.59
RAB39A-201ENST00000320578 GHRHP01286 108 aa11.36□□□□□ -0.59
RAB39A-201ENST00000320578 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.36□□□□□ -0.59
RAB39A-201ENST00000320578 FAM19A5Q7Z5A7 132 aaPredicted RBP11.36□□□□□ -0.59
RAB39A-201ENST00000320578 OBSCN-AS1Q96MR7 158 aa11.36□□□□□ -0.59
RAB39A-201ENST00000320578 DNAH6Q9C0G6 4158 aa11.36□□□□□ -0.59
RAB39A-201ENST00000320578 VPS25Q9BRG1 176 aa11.35□□□□□ -0.59
RAB39A-201ENST00000320578 KRTAP4-16G5E9R7 235 aaPredicted RBP11.34□□□□□ -0.59
RAB39A-201ENST00000320578 IGKV2-24A0A0C4DH68 120 aa11.33□□□□□ -0.6
RAB39A-201ENST00000320578 A0A1W2PNN7 141 aa11.32□□□□□ -0.6
RAB39A-201ENST00000320578 RPL37AP8A6NKH3 93 aa11.31□□□□□ -0.6
RAB39A-201ENST00000320578 FAM240AA0A1B0GVK7 77 aa11.3□□□□□ -0.6
RAB39A-201ENST00000320578 JMJD7-PLA2G4BH0Y9G9 81 aa11.3□□□□□ -0.6
RAB39A-201ENST00000320578 ALMS1Q8TCU4 4167 aa11.3□□□□□ -0.6
RAB39A-201ENST00000320578 EPM2AB3EWF7 344 aa11.3□□□□□ -0.6
RAB39A-201ENST00000320578 Q6ZQY7 126 aa11.3□□□□□ -0.6
RAB39A-201ENST00000320578 DHRS4-AS1Q9P1J3 65 aa11.3□□□□□ -0.6
RAB39A-201ENST00000320578 B5MCH6 92 aa11.29□□□□□ -0.6
RAB39A-201ENST00000320578 Q6ZRX8 168 aa11.29□□□□□ -0.6
RAB39A-201ENST00000320578 TGP01266 2768 aa11.28□□□□□ -0.6
RAB39A-201ENST00000320578 ETDCA0A1B0GVM5 59 aa11.28□□□□□ -0.6
RAB39A-201ENST00000320578 REG3GQ6UW15 175 aa11.28□□□□□ -0.6
RAB39A-201ENST00000320578 ACYP1P07311 99 aa11.27□□□□□ -0.61
RAB39A-201ENST00000320578 CHTF8P0CG12 524 aa11.27□□□□□ -0.61
RAB39A-201ENST00000320578 RTL8CO15255 209 aa11.26□□□□□ -0.61
RAB39A-201ENST00000320578 KMT2AQ03164 3969 aa11.26□□□□□ -0.61
RAB39A-201ENST00000320578 CDIP1Q9H305 208 aa11.25□□□□□ -0.61
RAB39A-201ENST00000320578 SPACA4Q8TDM5 124 aa11.25□□□□□ -0.61
RAB39A-201ENST00000320578 DNAH2Q9P225 4427 aa11.23□□□□□ -0.61
RAB39A-201ENST00000320578 IGLV5-52A0A0A0MRZ9 124 aa11.21□□□□□ -0.62
RAB39A-201ENST00000320578 Q9BRP9 147 aa11.21□□□□□ -0.62
RAB39A-201ENST00000320578 PHF5AQ7RTV0 110 aaKnown RBP11.2□□□□□ -0.62
RAB39A-201ENST00000320578 C14orf132Q9NPU4 83 aa11.2□□□□□ -0.62
RAB39A-201ENST00000320578 PANO1I0J062 215 aa11.19□□□□□ -0.62
RAB39A-201ENST00000320578 TNP2Q05952 138 aa11.19□□□□□ -0.62
RAB39A-201ENST00000320578 DNAH17Q9UFH2 4485 aa11.19□□□□□ -0.62
RAB39A-201ENST00000320578 H0Y9J4 135 aa11.19□□□□□ -0.62
RAB39A-201ENST00000320578 RBM3P98179 157 aaKnown RBP11.19□□□□□ -0.62
RAB39A-201ENST00000320578 LAMTOR3Q9UHA4 124 aa11.19□□□□□ -0.62
RAB39A-201ENST00000320578 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.19□□□□□ -0.62
RAB39A-201ENST00000320578 UBE2BP63146 152 aa11.18□□□□□ -0.62
RAB39A-201ENST00000320578 SIGMAR1Q99720 223 aa11.18□□□□□ -0.62
RAB39A-201ENST00000320578 C21orf62-AS1Q17RA5 79 aa11.17□□□□□ -0.62
RAB39A-201ENST00000320578 LOC110117498A0A087WWA1 95 aa11.16□□□□□ -0.62
RAB39A-201ENST00000320578 PDE6GP18545 87 aa11.16□□□□□ -0.62
RAB39A-201ENST00000320578 IGLV5-48A0A075B6I7 105 aa11.16□□□□□ -0.62
RAB39A-201ENST00000320578 CCKP06307 115 aa11.16□□□□□ -0.62
RAB39A-201ENST00000320578 DPH3Q96FX2 82 aa11.16□□□□□ -0.62
RAB39A-201ENST00000320578 NDUFV3P56181 108 aaKnown RBP11.15□□□□□ -0.62
RAB39A-201ENST00000320578 PLAC8Q9NZF1 115 aa11.15□□□□□ -0.62
RAB39A-201ENST00000320578 LINC01547P58512 204 aaPredicted RBP11.14□□□□□ -0.63
RAB39A-201ENST00000320578 GAGE2AQ6NT46 116 aa11.14□□□□□ -0.63
RAB39A-201ENST00000320578 FAM19A1Q7Z5A9 133 aa11.14□□□□□ -0.63
RAB39A-201ENST00000320578 SMCR5Q8TEV8 140 aa11.14□□□□□ -0.63
RAB39A-201ENST00000320578 HECTD4Q9Y4D8 3996 aa11.13□□□□□ -0.63
RAB39A-201ENST00000320578 KRTAP11-1Q8IUC1 163 aa11.13□□□□□ -0.63
RAB39A-201ENST00000320578 Q8N377 158 aa11.13□□□□□ -0.63
RAB39A-201ENST00000320578 DSCR8Q96T75 97 aa11.12□□□□□ -0.63
RAB39A-201ENST00000320578 XGP55808 180 aa11.11□□□□□ -0.63
RAB39A-201ENST00000320578 Q6ZQT0 140 aa11.11□□□□□ -0.63
RAB39A-201ENST00000320578 TRBV7-4A0A0J9YYF1 115 aa11.1□□□□□ -0.63
RAB39A-201ENST00000320578 BCE1O60756 84 aa11.09□□□□□ -0.63
RAB39A-201ENST00000320578 ERC2-IT1O76042 136 aa11.09□□□□□ -0.63
RAB39A-201ENST00000320578 FUSP35637 526 aaKnown RBP eCLIP11.09□□□□□ -0.63
RAB39A-201ENST00000320578 LCE6AA0A183 80 aa11.07□□□□□ -0.64
RAB39A-201ENST00000320578 A0A1B0GV72 72 aa11.07□□□□□ -0.64
RAB39A-201ENST00000320578 PRLHP81277 87 aa11.07□□□□□ -0.64
RAB39A-201ENST00000320578 DEFB105AQ8NG35 78 aa11.07□□□□□ -0.64
RAB39A-201ENST00000320578 MT-ATP8P03928 68 aa11.06□□□□□ -0.64
RAB39A-201ENST00000320578 KRTAP10-2P60368 255 aa11.06□□□□□ -0.64
RAB39A-201ENST00000320578 LINC00643Q86TS7 51 aa11.06□□□□□ -0.64
RAB39A-201ENST00000320578 KRTAP13-1Q8IUC0 172 aa11.06□□□□□ -0.64
RAB39A-201ENST00000320578 ST20-AS1Q8NBB2 130 aa11.06□□□□□ -0.64
RAB39A-201ENST00000320578 FRAS1Q86XX4 4008 aa11.05□□□□□ -0.64
RAB39A-201ENST00000320578 UBE2AP49459 152 aa11.05□□□□□ -0.64
RAB39A-201ENST00000320578 SCGB1A1P11684 91 aa11.03□□□□□ -0.64
RAB39A-201ENST00000320578 HIGD2AQ9BW72 106 aa11.03□□□□□ -0.64
RAB39A-201ENST00000320578 LINC00846Q9NV44 126 aa11.02□□□□□ -0.64
RAB39A-201ENST00000320578 SPRR1BP22528 89 aa11.01□□□□□ -0.65
RAB39A-201ENST00000320578 Q6ZSA8 131 aa11□□□□□ -0.65
RAB39A-201ENST00000320578 DNAH11Q96DT5 4516 aa11□□□□□ -0.65
RAB39A-201ENST00000320578 LINC00336Q6ZUF6 198 aa11□□□□□ -0.65
RAB39A-201ENST00000320578 SMIM29Q86T20 159 aa11□□□□□ -0.65
RAB39A-201ENST00000320578 Q6Q795 121 aa10.99□□□□□ -0.65
RAB39A-201ENST00000320578 A0A1B0GW54 56 aa10.98□□□□□ -0.65
RAB39A-201ENST00000320578 PSORS1C2Q9UIG4 136 aa10.98□□□□□ -0.65
RAB39A-201ENST00000320578 TRBV7-7A0A0K0K1E9 115 aa10.97□□□□□ -0.65
RAB39A-201ENST00000320578 IMUPQ9GZP8 106 aa10.97□□□□□ -0.65
RAB39A-201ENST00000320578 IGLV8-61A0A075B6I0 122 aa10.96□□□□□ -0.65
RAB39A-201ENST00000320578 HYDINQ4G0P3 5121 aa10.96□□□□□ -0.65
RAB39A-201ENST00000320578 FAT2Q9NYQ8 4349 aa10.95□□□□□ -0.66
RAB39A-201ENST00000320578 Q6JHZ5 121 aa10.95□□□□□ -0.66
RAB39A-201ENST00000320578 C3orf22Q8N5N4 141 aa10.95□□□□□ -0.66
RAB39A-201ENST00000320578 UBL5Q9BZL1 73 aa10.95□□□□□ -0.66
RAB39A-201ENST00000320578 SACSQ9NZJ4 4579 aa10.94□□□□□ -0.66
RAB39A-201ENST00000320578 F8WEM9 126 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms