RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 M0R378 163 aa13.7□□□□□ -0.22
RELA-201ENST00000308639 TRAV7A0A075B6U4 112 aa13.69□□□□□ -0.22
RELA-201ENST00000308639 DEFB131BA0A096LNP1 70 aa13.69□□□□□ -0.22
RELA-201ENST00000308639 F8WDY8 70 aa13.69□□□□□ -0.22
RELA-201ENST00000308639 PKIGQ9Y2B9 76 aa13.69□□□□□ -0.22
RELA-201ENST00000308639 SMIM26A0A096LP01 95 aa13.69□□□□□ -0.22
RELA-201ENST00000308639 H3BNG1 76 aa13.69□□□□□ -0.22
RELA-201ENST00000308639 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.69□□□□□ -0.22
RELA-201ENST00000308639 FP248Q71RG6 208 aaPredicted RBP13.67□□□□□ -0.22
RELA-201ENST00000308639 BCE1O60756 84 aa13.67□□□□□ -0.22
RELA-201ENST00000308639 KLKP1Q107X0 134 aa13.67□□□□□ -0.22
RELA-201ENST00000308639 LINC00528Q8N1L1 170 aa13.67□□□□□ -0.22
RELA-201ENST00000308639 TRBV7-4A0A0J9YYF1 115 aa13.66□□□□□ -0.22
RELA-201ENST00000308639 SERTAD4-AS1Q5TG53 156 aa13.66□□□□□ -0.22
RELA-201ENST00000308639 TRAV10A0A0B4J240 114 aa13.65□□□□□ -0.22
RELA-201ENST00000308639 PRB2P02812 416 aaPredicted RBP13.65□□□□□ -0.22
RELA-201ENST00000308639 C11orf45Q8TAV5 145 aa13.65□□□□□ -0.22
RELA-201ENST00000308639 SYCNQ0VAF6 134 aa13.64□□□□□ -0.23
RELA-201ENST00000308639 KRTAP24-1Q3LI83 254 aa13.63□□□□□ -0.23
RELA-201ENST00000308639 LINC01556Q5JQF7 62 aa13.63□□□□□ -0.23
RELA-201ENST00000308639 CASC10Q5T4H9 136 aa13.63□□□□□ -0.23
RELA-201ENST00000308639 SNURFQ9Y675 71 aa13.62□□□□□ -0.23
RELA-201ENST00000308639 DEFB105AQ8NG35 78 aa13.62□□□□□ -0.23
RELA-201ENST00000308639 RMI2Q96E14 147 aa13.61□□□□□ -0.23
RELA-201ENST00000308639 F8WEM9 126 aa13.6□□□□□ -0.23
RELA-201ENST00000308639 FAM168BA1KXE4 195 aa13.59□□□□□ -0.23
RELA-201ENST00000308639 TRBV7-6A0A0J9YX20 115 aa13.59□□□□□ -0.23
RELA-201ENST00000308639 RPL37AP8A6NKH3 93 aa13.58□□□□□ -0.23
RELA-201ENST00000308639 PDE6GP18545 87 aa13.58□□□□□ -0.23
RELA-201ENST00000308639 C7orf33Q8WU49 177 aa13.58□□□□□ -0.23
RELA-201ENST00000308639 Q8N9L7 120 aa13.57□□□□□ -0.24
RELA-201ENST00000308639 NBEAL1Q6ZS30 2694 aa13.57□□□□□ -0.24
RELA-201ENST00000308639 NKAPP1Q8N9T2 125 aa13.57□□□□□ -0.24
RELA-201ENST00000308639 LINC00474Q9P2X8 69 aa13.57□□□□□ -0.24
RELA-201ENST00000308639 H3BQ85 93 aa13.55□□□□□ -0.24
RELA-201ENST00000308639 DNAH3Q8TD57 4116 aa13.55□□□□□ -0.24
RELA-201ENST00000308639 BRK1Q8WUW1 75 aa13.54□□□□□ -0.24
RELA-201ENST00000308639 CXCL6P80162 114 aa13.53□□□□□ -0.24
RELA-201ENST00000308639 C3orf84H3BNL1 204 aa13.52□□□□□ -0.24
RELA-201ENST00000308639 LINC00588Q9Y4M8 146 aa13.52□□□□□ -0.24
RELA-201ENST00000308639 COL6A5A8TX70 2615 aa13.52□□□□□ -0.25
RELA-201ENST00000308639 NDUFC1O43677 76 aa13.51□□□□□ -0.25
RELA-201ENST00000308639 DNAH10OSP0CZ25 163 aa13.51□□□□□ -0.25
RELA-201ENST00000308639 KCNQ1DNQ9H478 68 aa13.51□□□□□ -0.25
RELA-201ENST00000308639 DNAH1Q9P2D7 4330 aa13.5□□□□□ -0.25
RELA-201ENST00000308639 Q8N377 158 aa13.5□□□□□ -0.25
RELA-201ENST00000308639 C1orf195Q5TG92 126 aa13.49□□□□□ -0.25
RELA-201ENST00000308639 A0A0U1RQV1 116 aa13.49□□□□□ -0.25
RELA-201ENST00000308639 V9GYY9 64 aa13.49□□□□□ -0.25
RELA-201ENST00000308639 LYSTQ99698 3801 aa13.49□□□□□ -0.25
RELA-201ENST00000308639 ATP5EP56381 51 aaPredicted RBP13.48□□□□□ -0.25
RELA-201ENST00000308639 KRTAP7-1Q8IUC3 87 aa13.48□□□□□ -0.25
RELA-201ENST00000308639 TM2D3Q9BRN9 247 aa13.48□□□□□ -0.25
RELA-201ENST00000308639 DNAH10Q8IVF4 4471 aa13.47□□□□□ -0.25
RELA-201ENST00000308639 SEC61GP60059 68 aa13.47□□□□□ -0.25
RELA-201ENST00000308639 ST20-AS1Q8NBB2 130 aa13.47□□□□□ -0.25
RELA-201ENST00000308639 Q9BRP9 147 aa13.47□□□□□ -0.25
RELA-201ENST00000308639 HUWE1Q7Z6Z7 4374 aaKnown RBP13.46□□□□□ -0.25
RELA-201ENST00000308639 BPY2O14599 106 aa13.45□□□□□ -0.26
RELA-201ENST00000308639 NREPQ16612 68 aa13.41□□□□□ -0.26
RELA-201ENST00000308639 Q6ZRX8 168 aa13.41□□□□□ -0.26
RELA-201ENST00000308639 ERC2-IT1O76042 136 aa13.4□□□□□ -0.26
RELA-201ENST00000308639 IGLV1-50A0A075B6I6 118 aa13.4□□□□□ -0.26
RELA-201ENST00000308639 KRTAP4-16G5E9R7 235 aaPredicted RBP13.39□□□□□ -0.27
RELA-201ENST00000308639 TLX1NBP0CAT3 122 aa13.39□□□□□ -0.27
RELA-201ENST00000308639 IGKV4-1P06312 121 aa13.38□□□□□ -0.27
RELA-201ENST00000308639 MPLKIPQ8TAP9 179 aa13.38□□□□□ -0.27
RELA-201ENST00000308639 ETDCA0A1B0GVM5 59 aa13.38□□□□□ -0.27
RELA-201ENST00000308639 FAM229BQ4G0N7 80 aa13.37□□□□□ -0.27
RELA-201ENST00000308639 TMEM254Q8TBM7 123 aa13.36□□□□□ -0.27
RELA-201ENST00000308639 CSMD3Q7Z407 3707 aa13.35□□□□□ -0.27
RELA-201ENST00000308639 A0A1W2PNM2 257 aa13.35□□□□□ -0.27
RELA-201ENST00000308639 MGAM2Q2M2H8 2515 aa13.35□□□□□ -0.27
RELA-201ENST00000308639 IGLV5-48A0A075B6I7 105 aa13.35□□□□□ -0.27
RELA-201ENST00000308639 A0A0G2JQZ4 141 aa13.34□□□□□ -0.27
RELA-201ENST00000308639 A0A1W2PNN7 141 aa13.34□□□□□ -0.27
RELA-201ENST00000308639 DHRS4-AS1Q9P1J3 65 aa13.33□□□□□ -0.28
RELA-201ENST00000308639 PLA2G2DQ9UNK4 145 aa13.33□□□□□ -0.28
RELA-201ENST00000308639 MRPL55Q7Z7F7 128 aaKnown RBP13.33□□□□□ -0.28
RELA-201ENST00000308639 STAB2Q8WWQ8 2551 aa13.32□□□□□ -0.28
RELA-201ENST00000308639 DNAH9Q9NYC9 4486 aa13.32□□□□□ -0.28
RELA-201ENST00000308639 SPRR1AP35321 89 aa13.32□□□□□ -0.28
RELA-201ENST00000308639 PRYO14603 147 aa13.32□□□□□ -0.28
RELA-201ENST00000308639 UBE2BP63146 152 aa13.31□□□□□ -0.28
RELA-201ENST00000308639 COL7A1Q02388 2944 aa13.31□□□□□ -0.28
RELA-201ENST00000308639 C1orf137Q5JT78 98 aa13.31□□□□□ -0.28
RELA-201ENST00000308639 K7EIL1 84 aa13.3□□□□□ -0.28
RELA-201ENST00000308639 IGLV5-37A0A075B6J1 123 aa13.29□□□□□ -0.28
RELA-201ENST00000308639 KRTAP1-5Q9BYS1 174 aa13.29□□□□□ -0.28
RELA-201ENST00000308639 TNP2Q05952 138 aa13.28□□□□□ -0.28
RELA-201ENST00000308639 IGKV2-24A0A0C4DH68 120 aa13.28□□□□□ -0.28
RELA-201ENST00000308639 FUSP35637 526 aaKnown RBP eCLIP13.27□□□□□ -0.29
RELA-201ENST00000308639 TENM2Q9NT68 2774 aa13.27□□□□□ -0.29
RELA-201ENST00000308639 SRRM2Q9UQ35 2752 aaKnown RBP13.27□□□□□ -0.29
RELA-201ENST00000308639 A0A096LNI7 61 aa13.23□□□□□ -0.29
RELA-201ENST00000308639 PRLHP81277 87 aa13.23□□□□□ -0.29
RELA-201ENST00000308639 REG3GQ6UW15 175 aa13.23□□□□□ -0.29
RELA-201ENST00000308639 Q8NBF4 154 aa13.22□□□□□ -0.29
RELA-201ENST00000308639 OCR1Q9BZK8 76 aa13.22□□□□□ -0.29
RELA-201ENST00000308639 SMIM29Q86T20 159 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms