RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 A8MWP4 228 aa10.13□□□□□ -0.79
FNDC1-201ENST00000297267 TP53AIP1Q9HCN2 124 aa10.13□□□□□ -0.79
FNDC1-201ENST00000297267 REV3LO60673 3130 aa10.13□□□□□ -0.79
FNDC1-201ENST00000297267 PRRC2CQ9Y520 2896 aaKnown RBP10.13□□□□□ -0.79
FNDC1-201ENST00000297267 COL6A3P12111 3177 aa10.12□□□□□ -0.79
FNDC1-201ENST00000297267 SPTBN5Q9NRC6 3674 aaKnown RBP10.12□□□□□ -0.79
FNDC1-201ENST00000297267 A0A0D9SG42 100 aa10.12□□□□□ -0.79
FNDC1-201ENST00000297267 CACNA1AO00555 2505 aa10.12□□□□□ -0.79
FNDC1-201ENST00000297267 LINC01600Q96MT4 127 aa10.1□□□□□ -0.79
FNDC1-201ENST00000297267 MRPL34Q9BQ48 92 aaKnown RBP10.09□□□□□ -0.79
FNDC1-201ENST00000297267 LINC01554Q52M75 96 aa10.08□□□□□ -0.8
FNDC1-201ENST00000297267 Q8N1X5 172 aa10.08□□□□□ -0.8
FNDC1-201ENST00000297267 ANKRD17O75179 2603 aaKnown RBP10.07□□□□□ -0.8
FNDC1-201ENST00000297267 TLN2Q9Y4G6 2542 aa10.06□□□□□ -0.8
FNDC1-201ENST00000297267 ABCA12Q86UK0 2595 aa10.06□□□□□ -0.8
FNDC1-201ENST00000297267 H3BNG1 76 aa10.06□□□□□ -0.8
FNDC1-201ENST00000297267 JMJD1CQ15652 2540 aa10.06□□□□□ -0.8
FNDC1-201ENST00000297267 PRR15Q8IV56 129 aa10.05□□□□□ -0.8
FNDC1-201ENST00000297267 J3QL48 77 aa10.04□□□□□ -0.8
FNDC1-201ENST00000297267 TLN1Q9Y490 2541 aaKnown RBP10.04□□□□□ -0.8
FNDC1-201ENST00000297267 LINC00528Q8N1L1 170 aa10.03□□□□□ -0.8
FNDC1-201ENST00000297267 C8orf87E5RJ46 101 aa10.03□□□□□ -0.8
FNDC1-201ENST00000297267 C8orf17Q9NRJ1 99 aa10.02□□□□□ -0.81
FNDC1-201ENST00000297267 KCNQ1DNQ9H478 68 aa10.02□□□□□ -0.81
FNDC1-201ENST00000297267 LINC00336Q6ZUF6 198 aa10.01□□□□□ -0.81
FNDC1-201ENST00000297267 SETD2Q9BYW2 2564 aaPredicted RBP10.01□□□□□ -0.81
FNDC1-201ENST00000297267 C19orf73Q9NVV2 129 aa9.99□□□□□ -0.81
FNDC1-201ENST00000297267 MYO18BQ8IUG5 2567 aa9.99□□□□□ -0.81
FNDC1-201ENST00000297267 DOPEY1Q5JWR5 2465 aa9.99□□□□□ -0.81
FNDC1-201ENST00000297267 COX6B2Q6YFQ2 88 aa9.99□□□□□ -0.81
FNDC1-201ENST00000297267 POLQO75417 2590 aa9.98□□□□□ -0.81
FNDC1-201ENST00000297267 PSORS1C2Q9UIG4 136 aa9.96□□□□□ -0.82
FNDC1-201ENST00000297267 ANKRD11Q6UB99 2663 aaPredicted RBP9.95□□□□□ -0.82
FNDC1-201ENST00000297267 EYSQ5T1H1 3165 aa9.95□□□□□ -0.82
FNDC1-201ENST00000297267 ZFYVE26Q68DK2 2539 aa9.95□□□□□ -0.82
FNDC1-201ENST00000297267 A0A096LNT2 108 aa9.95□□□□□ -0.82
FNDC1-201ENST00000297267 RPS28P62857 69 aaKnown RBP9.95□□□□□ -0.82
FNDC1-201ENST00000297267 LINC00304Q8N9R0 145 aa9.95□□□□□ -0.82
FNDC1-201ENST00000297267 A0A087WTM6 91 aa9.95□□□□□ -0.82
FNDC1-201ENST00000297267 MIR22HGQ0VDD5 57 aa9.94□□□□□ -0.82
FNDC1-201ENST00000297267 A0A1B0GVX0 72 aa9.94□□□□□ -0.82
FNDC1-201ENST00000297267 WWC2-AS2Q96NR7 200 aa9.93□□□□□ -0.82
FNDC1-201ENST00000297267 MYO9AB2RTY4 2548 aa9.93□□□□□ -0.82
FNDC1-201ENST00000297267 H7BZZ5 65 aa9.92□□□□□ -0.82
FNDC1-201ENST00000297267 LAMA1P25391 3075 aa9.92□□□□□ -0.82
FNDC1-201ENST00000297267 IGLV5-48A0A075B6I7 105 aa9.91□□□□□ -0.82
FNDC1-201ENST00000297267 LOC101927531A0A1B0GV80 90 aa9.91□□□□□ -0.82
FNDC1-201ENST00000297267 ZNF575Q86XF7 245 aa9.91□□□□□ -0.82
FNDC1-201ENST00000297267 ZNF861PO60384 105 aa9.91□□□□□ -0.82
FNDC1-201ENST00000297267 WDFY3Q8IZQ1 3526 aa9.9□□□□□ -0.82
FNDC1-201ENST00000297267 PRR34Q9NV39 138 aa9.9□□□□□ -0.82
FNDC1-201ENST00000297267 A0A1W2PNM2 257 aa9.9□□□□□ -0.82
FNDC1-201ENST00000297267 KRTAP1-3Q8IUG1 177 aa9.9□□□□□ -0.83
FNDC1-201ENST00000297267 CR1P17927 2039 aa9.86□□□□□ -0.83
FNDC1-201ENST00000297267 H3BPC8 53 aa9.86□□□□□ -0.83
FNDC1-201ENST00000297267 FAM229BQ4G0N7 80 aa9.86□□□□□ -0.83
FNDC1-201ENST00000297267 CHD8Q9HCK8 2581 aa9.86□□□□□ -0.83
FNDC1-201ENST00000297267 ZNF462Q96JM2 2506 aa9.85□□□□□ -0.83
FNDC1-201ENST00000297267 WDFY4Q6ZS81 3184 aa9.85□□□□□ -0.83
FNDC1-201ENST00000297267 SPTBN4Q9H254 2564 aa9.85□□□□□ -0.83
FNDC1-201ENST00000297267 USP9XQ93008 2570 aaPredicted RBP9.85□□□□□ -0.83
FNDC1-201ENST00000297267 IGLV5-37A0A075B6J1 123 aa9.84□□□□□ -0.83
FNDC1-201ENST00000297267 IGLV7-43P04211 117 aa9.84□□□□□ -0.83
FNDC1-201ENST00000297267 ACANP16112 2415 aa9.84□□□□□ -0.83
FNDC1-201ENST00000297267 UQCR11O14957 56 aa9.83□□□□□ -0.84
FNDC1-201ENST00000297267 KLK9Q2XQG4 91 aa9.82□□□□□ -0.84
FNDC1-201ENST00000297267 CEP295Q9C0D2 2601 aa9.8□□□□□ -0.84
FNDC1-201ENST00000297267 Q8NDZ9 215 aa9.8□□□□□ -0.84
FNDC1-201ENST00000297267 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.8□□□□□ -0.84
FNDC1-201ENST00000297267 TNP2Q05952 138 aa9.79□□□□□ -0.84
FNDC1-201ENST00000297267 CYSTM1Q9H1C7 97 aa9.79□□□□□ -0.84
FNDC1-201ENST00000297267 SPRR4Q96PI1 79 aa9.79□□□□□ -0.84
FNDC1-201ENST00000297267 PRR26Q8N8Z3 221 aa9.78□□□□□ -0.84
FNDC1-201ENST00000297267 KRTAP1-1Q07627 177 aa9.77□□□□□ -0.84
FNDC1-201ENST00000297267 FAM104AQ969W3 186 aa9.77□□□□□ -0.85
FNDC1-201ENST00000297267 A0A1B0GW54 56 aa9.77□□□□□ -0.85
FNDC1-201ENST00000297267 CFAP47Q6ZTR5 3102 aa9.76□□□□□ -0.85
FNDC1-201ENST00000297267 KLKP1Q107X0 134 aa9.75□□□□□ -0.85
FNDC1-201ENST00000297267 CRIPTQ9P021 101 aa9.75□□□□□ -0.85
FNDC1-201ENST00000297267 C9orf163Q8N9P6 203 aa9.75□□□□□ -0.85
FNDC1-201ENST00000297267 PKD1L2Q7Z442 2459 aa9.73□□□□□ -0.85
FNDC1-201ENST00000297267 LINC00612Q8N6U2 182 aa9.73□□□□□ -0.85
FNDC1-201ENST00000297267 ASPMQ8IZT6 3477 aa9.72□□□□□ -0.85
FNDC1-201ENST00000297267 CHD9Q3L8U1 2897 aa9.71□□□□□ -0.86
FNDC1-201ENST00000297267 MGAQ8IWI9 3026 aa9.71□□□□□ -0.86
FNDC1-201ENST00000297267 DCHS1Q96JQ0 3298 aa9.7□□□□□ -0.86
FNDC1-201ENST00000297267 TLX1NBP0CAT3 122 aa9.7□□□□□ -0.86
FNDC1-201ENST00000297267 WIPF1O43516 503 aa9.69□□□□□ -0.86
FNDC1-201ENST00000297267 MTORP42345 2549 aa9.69□□□□□ -0.86
FNDC1-201ENST00000297267 USP9YO00507 2555 aaPredicted RBP9.68□□□□□ -0.86
FNDC1-201ENST00000297267 CNBPP62633 177 aaKnown RBP9.66□□□□□ -0.86
FNDC1-201ENST00000297267 CYP4F30PQ9H0H9 118 aa9.66□□□□□ -0.86
FNDC1-201ENST00000297267 PLA2G2DQ9UNK4 145 aa9.66□□□□□ -0.86
FNDC1-201ENST00000297267 KTN1-AS1Q86SY8 53 aa9.66□□□□□ -0.86
FNDC1-201ENST00000297267 PRAC1Q96KF2 57 aa9.65□□□□□ -0.87
FNDC1-201ENST00000297267 FRYLO94915 3013 aa9.62□□□□□ -0.87
FNDC1-201ENST00000297267 FASNP49327 2511 aaKnown RBP9.6□□□□□ -0.87
FNDC1-201ENST00000297267 OCR1Q9BZK8 76 aa9.6□□□□□ -0.87
FNDC1-201ENST00000297267 Q8N9P0 234 aaPredicted RBP9.59□□□□□ -0.87
FNDC1-201ENST00000297267 RBM12B-AS1Q9P1G2 102 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms