RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 VPS13DQ5THJ4 4388 aa13.31□□□□□ -0.28
LYSMD2-201ENST00000267838 H3BQ85 93 aa13.31□□□□□ -0.28
LYSMD2-201ENST00000267838 C9orf153Q5TBE3 101 aa13.31□□□□□ -0.28
LYSMD2-201ENST00000267838 LINC00575Q6W349 94 aa13.31□□□□□ -0.28
LYSMD2-201ENST00000267838 CNBPP62633 177 aaKnown RBP13.3□□□□□ -0.28
LYSMD2-201ENST00000267838 LOC107984640A0A0U1RRK4 108 aa13.3□□□□□ -0.28
LYSMD2-201ENST00000267838 TRBV10-3A0A0K0K1G6 114 aa13.29□□□□□ -0.28
LYSMD2-201ENST00000267838 LRCOL1A6NCL2 159 aa13.29□□□□□ -0.28
LYSMD2-201ENST00000267838 M0R378 163 aa13.29□□□□□ -0.28
LYSMD2-201ENST00000267838 COX7CP15954 63 aa13.29□□□□□ -0.28
LYSMD2-201ENST00000267838 DNAH10Q8IVF4 4471 aa13.29□□□□□ -0.28
LYSMD2-201ENST00000267838 IGKV3D-7A0A0C4DH55 119 aa13.28□□□□□ -0.28
LYSMD2-201ENST00000267838 hADV29S1A0JD25 119 aa13.27□□□□□ -0.28
LYSMD2-201ENST00000267838 Q6ZR54 194 aa13.26□□□□□ -0.29
LYSMD2-201ENST00000267838 PLA2G2DQ9UNK4 145 aa13.26□□□□□ -0.29
LYSMD2-201ENST00000267838 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.25□□□□□ -0.29
LYSMD2-201ENST00000267838 SERTAD4-AS1Q5TG53 156 aa13.25□□□□□ -0.29
LYSMD2-201ENST00000267838 TRAV23DV6A0A075B6W5 121 aa13.24□□□□□ -0.29
LYSMD2-201ENST00000267838 NKAPP1Q8N9T2 125 aa13.24□□□□□ -0.29
LYSMD2-201ENST00000267838 LY6G6CO95867 125 aa13.22□□□□□ -0.29
LYSMD2-201ENST00000267838 LOC110117498A0A087WWA1 95 aa13.21□□□□□ -0.29
LYSMD2-201ENST00000267838 RBM3P98179 157 aaKnown RBP13.21□□□□□ -0.29
LYSMD2-201ENST00000267838 UBL5Q9BZL1 73 aa13.21□□□□□ -0.29
LYSMD2-201ENST00000267838 FAM168BA1KXE4 195 aa13.2□□□□□ -0.3
LYSMD2-201ENST00000267838 GHRHP01286 108 aa13.2□□□□□ -0.3
LYSMD2-201ENST00000267838 CRYGAP11844 174 aa13.2□□□□□ -0.3
LYSMD2-201ENST00000267838 IGLV5-37A0A075B6J1 123 aa13.2□□□□□ -0.3
LYSMD2-201ENST00000267838 DIRC1Q969H9 104 aa13.2□□□□□ -0.3
LYSMD2-201ENST00000267838 C7orf33Q8WU49 177 aa13.19□□□□□ -0.3
LYSMD2-201ENST00000267838 LINC00476Q8WZB0 136 aa13.19□□□□□ -0.3
LYSMD2-201ENST00000267838 C16orf90A8MZG2 172 aa13.18□□□□□ -0.3
LYSMD2-201ENST00000267838 ZNF73O43830 326 aaPredicted RBP13.18□□□□□ -0.3
LYSMD2-201ENST00000267838 PDE6GP18545 87 aa13.18□□□□□ -0.3
LYSMD2-201ENST00000267838 SERP2Q8N6R1 65 aa13.18□□□□□ -0.3
LYSMD2-201ENST00000267838 A0A096LNI7 61 aa13.17□□□□□ -0.3
LYSMD2-201ENST00000267838 C3orf84H3BNL1 204 aa13.17□□□□□ -0.3
LYSMD2-201ENST00000267838 TRBV7-6A0A0J9YX20 115 aa13.17□□□□□ -0.3
LYSMD2-201ENST00000267838 Q6ZQT0 140 aa13.17□□□□□ -0.3
LYSMD2-201ENST00000267838 KRTAP7-1Q8IUC3 87 aa13.17□□□□□ -0.3
LYSMD2-201ENST00000267838 LAMTOR3Q9UHA4 124 aa13.17□□□□□ -0.3
LYSMD2-201ENST00000267838 C9orf163Q8N9P6 203 aa13.16□□□□□ -0.3
LYSMD2-201ENST00000267838 A0A087WVE0 104 aa13.15□□□□□ -0.3
LYSMD2-201ENST00000267838 FAM19A5Q7Z5A7 132 aaPredicted RBP13.15□□□□□ -0.3
LYSMD2-201ENST00000267838 SMIM20Q8N5G0 67 aa13.15□□□□□ -0.3
LYSMD2-201ENST00000267838 A0A087WTM6 91 aa13.15□□□□□ -0.31
LYSMD2-201ENST00000267838 IGKV2-24A0A0C4DH68 120 aa13.14□□□□□ -0.31
LYSMD2-201ENST00000267838 C1orf134Q5TEV5 83 aa13.14□□□□□ -0.31
LYSMD2-201ENST00000267838 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.14□□□□□ -0.31
LYSMD2-201ENST00000267838 SVIPQ8NHG7 77 aa13.14□□□□□ -0.31
LYSMD2-201ENST00000267838 DSCR8Q96T75 97 aa13.14□□□□□ -0.31
LYSMD2-201ENST00000267838 Q6ZQY7 126 aa13.13□□□□□ -0.31
LYSMD2-201ENST00000267838 COX7BP24311 80 aa13.12□□□□□ -0.31
LYSMD2-201ENST00000267838 KCNQ1DNQ9H478 68 aa13.12□□□□□ -0.31
LYSMD2-201ENST00000267838 PKIGQ9Y2B9 76 aa13.12□□□□□ -0.31
LYSMD2-201ENST00000267838 ELOF1P60002 83 aaKnown RBP13.11□□□□□ -0.31
LYSMD2-201ENST00000267838 MRPL55Q7Z7F7 128 aaKnown RBP13.11□□□□□ -0.31
LYSMD2-201ENST00000267838 KMT2AQ03164 3969 aa13.1□□□□□ -0.31
LYSMD2-201ENST00000267838 IGLV1-50A0A075B6I6 118 aa13.09□□□□□ -0.31
LYSMD2-201ENST00000267838 RPL37AP8A6NKH3 93 aa13.09□□□□□ -0.31
LYSMD2-201ENST00000267838 A0A1W2PNN7 141 aa13.07□□□□□ -0.32
LYSMD2-201ENST00000267838 PRYO14603 147 aa13.07□□□□□ -0.32
LYSMD2-201ENST00000267838 CHTF8P0CG12 524 aa13.07□□□□□ -0.32
LYSMD2-201ENST00000267838 BCE1O60756 84 aa13.05□□□□□ -0.32
LYSMD2-201ENST00000267838 ALMS1Q8TCU4 4167 aa13.05□□□□□ -0.32
LYSMD2-201ENST00000267838 LINC00528Q8N1L1 170 aa13.04□□□□□ -0.32
LYSMD2-201ENST00000267838 DNAH6Q9C0G6 4158 aa13.04□□□□□ -0.32
LYSMD2-201ENST00000267838 TMEM258P61165 79 aa13.03□□□□□ -0.32
LYSMD2-201ENST00000267838 FAM19A1Q7Z5A9 133 aa13.02□□□□□ -0.32
LYSMD2-201ENST00000267838 LINC00474Q9P2X8 69 aa13.02□□□□□ -0.32
LYSMD2-201ENST00000267838 SPRR1AP35321 89 aa13.02□□□□□ -0.33
LYSMD2-201ENST00000267838 Q6ZVQ6 151 aa13.02□□□□□ -0.33
LYSMD2-201ENST00000267838 DNAH2Q9P225 4427 aa13.01□□□□□ -0.33
LYSMD2-201ENST00000267838 TRBV7-4A0A0J9YYF1 115 aa13.01□□□□□ -0.33
LYSMD2-201ENST00000267838 RTL8CO15255 209 aa13.01□□□□□ -0.33
LYSMD2-201ENST00000267838 CXCL6P80162 114 aa13.01□□□□□ -0.33
LYSMD2-201ENST00000267838 KRTAP4-16G5E9R7 235 aaPredicted RBP12.99□□□□□ -0.33
LYSMD2-201ENST00000267838 J3KT08 172 aa12.99□□□□□ -0.33
LYSMD2-201ENST00000267838 LINC01547P58512 204 aaPredicted RBP12.99□□□□□ -0.33
LYSMD2-201ENST00000267838 FUSP35637 526 aaKnown RBP eCLIP12.98□□□□□ -0.33
LYSMD2-201ENST00000267838 ETDCA0A1B0GVM5 59 aa12.97□□□□□ -0.33
LYSMD2-201ENST00000267838 PANO1I0J062 215 aa12.97□□□□□ -0.33
LYSMD2-201ENST00000267838 TNP2Q05952 138 aa12.97□□□□□ -0.33
LYSMD2-201ENST00000267838 REG3GQ6UW15 175 aa12.97□□□□□ -0.33
LYSMD2-201ENST00000267838 RPS28P62857 69 aaKnown RBP12.96□□□□□ -0.34
LYSMD2-201ENST00000267838 HAMPP81172 84 aa12.96□□□□□ -0.34
LYSMD2-201ENST00000267838 Q6ZRX8 168 aa12.96□□□□□ -0.34
LYSMD2-201ENST00000267838 PHF5AQ7RTV0 110 aaKnown RBP12.95□□□□□ -0.34
LYSMD2-201ENST00000267838 SPACA4Q8TDM5 124 aa12.94□□□□□ -0.34
LYSMD2-201ENST00000267838 IGLV5-52A0A0A0MRZ9 124 aa12.94□□□□□ -0.34
LYSMD2-201ENST00000267838 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.94□□□□□ -0.34
LYSMD2-201ENST00000267838 DPH3Q96FX2 82 aa12.93□□□□□ -0.34
LYSMD2-201ENST00000267838 DHRS4-AS1Q9P1J3 65 aa12.92□□□□□ -0.34
LYSMD2-201ENST00000267838 CYSTM1Q9H1C7 97 aa12.92□□□□□ -0.34
LYSMD2-201ENST00000267838 TRAV7A0A075B6U4 112 aa12.91□□□□□ -0.34
LYSMD2-201ENST00000267838 UBE2BP63146 152 aa12.91□□□□□ -0.34
LYSMD2-201ENST00000267838 Q9BRP9 147 aa12.91□□□□□ -0.34
LYSMD2-201ENST00000267838 DNAH17Q9UFH2 4485 aa12.91□□□□□ -0.34
LYSMD2-201ENST00000267838 HYDINQ4G0P3 5121 aa12.88□□□□□ -0.35
LYSMD2-201ENST00000267838 EPM2AB3EWF7 344 aa12.87□□□□□ -0.35
LYSMD2-201ENST00000267838 KRTAP11-1Q8IUC1 163 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms