RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 PdpnQ62011 172 aa10.15□□□□□ -0.78
Ssh1-202ENSMUST00000112298 Lypd8Q9D7S0 255 aa10.15□□□□□ -0.78
Ssh1-202ENSMUST00000112298 Timm10bQ9WV96 100 aa10.15□□□□□ -0.78
Ssh1-202ENSMUST00000112298 Gbf1Q6DFZ1 1861 aa10.15□□□□□ -0.78
Ssh1-202ENSMUST00000112298 Gm29423A0A087WRM1 55 aa10.15□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Pet100P0DJE0 76 aa10.15□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Zfp11P10751 647 aa10.15□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Pglyrp4Q0VB07 374 aa10.15□□□□□ -0.79
Ssh1-202ENSMUST00000112298 C330021F23RikQ8C7T0 141 aa10.15□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Olfr984Q8VFN1 314 aa10.15□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm11020F6ZGD5 61 aa10.15□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gpx1P11352 201 aa10.15□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm37388A0A0A6YY46 143 aa10.14□□□□□ -0.79
Ssh1-202ENSMUST00000112298 P04946 108 aa10.14□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm16503Q8C6M9 103 aa10.14□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm10306Q9CUK2 115 aa10.14□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Pygo1Q9D0P5 417 aa10.14□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Trav2Q5R1I9 109 aa10.14□□□□□ -0.79
Ssh1-202ENSMUST00000112298 PerpQ9JK95 193 aa10.14□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Ly86O88188 162 aa10.14□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Pcp4P63054 62 aa10.14□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm10767Q3TQP0 103 aa10.14□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Fbxl15Q91W61 300 aa10.14□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Mgst3Q9CPU4 153 aa10.14□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Defb3Q9WTL0 63 aa10.14□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Ighv1-31A0A0A6YWK5 117 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Lynx1P0DP60 116 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 RhohQ9D3G9 191 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Brca1P48754 1812 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 A0A1Y7VLU2 103 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Hist1h4aP62806 103 aaKnown RBP10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 MdfiP70331 251 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 OtosQ8R448 89 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Ttc6G3UYY4 1857 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Ighv1-18A0A0A6YXN4 117 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm16381A0A1Y7VKT9 73 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Dicer1Q8R418 1916 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Trbv31A0A075B5J5 111 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Igkv14-111A0A140T8P9 117 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 P01802 115 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 SbpP15501 199 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm16686Q3UMN9 131 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Tmem256Q5F285 113 aa10.13□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Trbv30A0A0B4J1P1 111 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Ccl17F6R5P4 103 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Colca2F8VPY8 239 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 A730015C16RikQ8C992 119 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Scn2aA0A0J9YTW6 2006 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Nit2Q9JHW2 276 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Trbv3A0A0A6YYE2 117 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Igkv6-23A0A140T8N5 115 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Sap30O88574 220 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 P01741 114 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Tex26Q0VB26 296 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm43517E9PYS1 339 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 CntfrO88507 372 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Tmem30bQ8BHG3 353 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 C1qtnf5Q8K479 243 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Fxyd1Q9Z239 92 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm45213A0A0U1RNZ6 101 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm10775Q3V290 127 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Spata46Q4FZF2 204 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Znf664Q4VA44 261 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Atp23Q9CWQ3 201 aa10.12□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Igkv4-90A0A075B5L3 117 aa10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 P01660 111 aa10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Taf15Q8BQ46 557 aaKnown RBP10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm10762Q9CZN6 115 aa10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Spaca3Q9D9X8 221 aa10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Mrpl32Q9DCI9 187 aaKnown RBP10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Myo16Q5DU14 1919 aa10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Jsrp1Q3MI48 332 aa10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 BmperQ8CJ69 685 aa10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm7075D3Z497 112 aa10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Tm2d3Q8BJ83 261 aa10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Rpp25lQ99JH1 163 aa10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 ElnP54320 860 aa10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Hist1h1tQ07133 208 aa10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm27027S4R1M6 97 aa10.11□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Samd5Q3V1H9 173 aa10.1□□□□□ -0.79
Ssh1-202ENSMUST00000112298 VsirQ9D659 308 aa10.1□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm28269A0A087WSG3 125 aa10.1□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm20517G3UVU6 152 aa10.1□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Nr2c2apQ3TV70 140 aa10.1□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Igkv1-99F6XWB2 120 aa10.1□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Fgf4P11403 202 aa10.1□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Tpsab1Q02844 273 aa10.1□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Ckap5A2AGT5 2032 aaKnown RBP10.1□□□□□ -0.79
Ssh1-202ENSMUST00000112298 P0C1Z5 52 aa10.09□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Mapk1ip1Q9D7G9 263 aa10.09□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Ighv8-6A0A0A6YXA3 118 aa10.09□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Trav7-1A0A0G2JEV5 112 aa10.09□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Stpg1Q9D2F5 341 aa10.09□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm33815A0A087WNV3 176 aa10.09□□□□□ -0.79
Ssh1-202ENSMUST00000112298 CckP09240 115 aa10.09□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Ca5aP23589 299 aa10.09□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Vwc2lQ505H4 222 aa10.09□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Rs1Q9Z1L4 224 aa10.09□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Scn10aQ6QIY3 1958 aa10.09□□□□□ -0.79
Ssh1-202ENSMUST00000112298 Gm20379A0A087WR34 119 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 92.7 ms