RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 ZNF625Q96I27 306 aaPredicted RBP1.57□□□□□ -2.16
PSPC1-208ENST00000635562 UBL5Q9BZL1 73 aa1.57□□□□□ -2.16
PSPC1-208ENST00000635562 ALPK2Q86TB3 2170 aa1.57□□□□□ -2.16
PSPC1-208ENST00000635562 ANKRD17O75179 2603 aaKnown RBP1.56□□□□□ -2.16
PSPC1-208ENST00000635562 LINC01546A6NGU7 62 aa1.56□□□□□ -2.16
PSPC1-208ENST00000635562 INE1O15225 51 aa1.56□□□□□ -2.16
PSPC1-208ENST00000635562 IGKV4-1P06312 121 aa1.56□□□□□ -2.16
PSPC1-208ENST00000635562 WFDC9Q8NEX5 89 aa1.56□□□□□ -2.16
PSPC1-208ENST00000635562 MED13LQ71F56 2210 aa1.56□□□□□ -2.16
PSPC1-208ENST00000635562 GPR179Q6PRD1 2367 aa1.56□□□□□ -2.16
PSPC1-208ENST00000635562 TRGV1A0A0A0MS02 117 aa1.55□□□□□ -2.16
PSPC1-208ENST00000635562 LINC00959A0A1B0GUT2 108 aa1.55□□□□□ -2.16
PSPC1-208ENST00000635562 IGIPA6NJ69 53 aa1.55□□□□□ -2.16
PSPC1-208ENST00000635562 M0R2N4 97 aa1.55□□□□□ -2.16
PSPC1-208ENST00000635562 IGLV6-57P01721 117 aa1.55□□□□□ -2.16
PSPC1-208ENST00000635562 COX6B1P14854 86 aa1.55□□□□□ -2.16
PSPC1-208ENST00000635562 LINC00315P59091 139 aa1.55□□□□□ -2.16
PSPC1-208ENST00000635562 TMEM14CQ9P0S9 112 aa1.55□□□□□ -2.16
PSPC1-208ENST00000635562 IGLV4-60A0A075B6I1 120 aa1.54□□□□□ -2.16
PSPC1-208ENST00000635562 FXYD4P59646 89 aa1.54□□□□□ -2.16
PSPC1-208ENST00000635562 GAFA1Q96PS6 74 aa1.54□□□□□ -2.16
PSPC1-208ENST00000635562 RTTNQ86VV8 2226 aa1.54□□□□□ -2.16
PSPC1-208ENST00000635562 TRGV2A0A075B6R0 118 aa1.53□□□□□ -2.16
PSPC1-208ENST00000635562 H3BRN7 92 aa1.53□□□□□ -2.16
PSPC1-208ENST00000635562 NDUFA4O00483 81 aa1.53□□□□□ -2.16
PSPC1-208ENST00000635562 F5P12259 2224 aa1.53□□□□□ -2.16
PSPC1-208ENST00000635562 DEFB114Q30KQ6 69 aa1.53□□□□□ -2.16
PSPC1-208ENST00000635562 DEFB112Q30KQ8 113 aa1.53□□□□□ -2.16
PSPC1-208ENST00000635562 FREM1Q5H8C1 2179 aa1.53□□□□□ -2.16
PSPC1-208ENST00000635562 FN1P02751 2386 aaKnown RBP1.52□□□□□ -2.17
PSPC1-208ENST00000635562 IGKV2D-24A0A075B6R9 120 aa1.52□□□□□ -2.17
PSPC1-208ENST00000635562 I3L3M4 83 aa1.52□□□□□ -2.17
PSPC1-208ENST00000635562 M0R1W7 72 aa1.52□□□□□ -2.17
PSPC1-208ENST00000635562 PP632Q6XCG6 107 aa1.52□□□□□ -2.17
PSPC1-208ENST00000635562 COA5Q86WW8 74 aa1.52□□□□□ -2.17
PSPC1-208ENST00000635562 TNCP24821 2201 aa1.52□□□□□ -2.17
PSPC1-208ENST00000635562 TNRC6CQ9HCJ0 1690 aaKnown RBP1.51□□□□□ -2.17
PSPC1-208ENST00000635562 ARL14EPLP0DKL9 152 aa1.51□□□□□ -2.17
PSPC1-208ENST00000635562 ACYP2P14621 99 aa1.51□□□□□ -2.17
PSPC1-208ENST00000635562 KRTAP13-2Q52LG2 175 aa1.51□□□□□ -2.17
PSPC1-208ENST00000635562 SHANK1Q9Y566 2161 aa1.51□□□□□ -2.17
PSPC1-208ENST00000635562 SPRR5A0A1B0GTR4 108 aa1.5□□□□□ -2.17
PSPC1-208ENST00000635562 A0A1B0GU69 56 aa1.5□□□□□ -2.17
PSPC1-208ENST00000635562 KCNQ1DNQ9H478 68 aa1.5□□□□□ -2.17
PSPC1-208ENST00000635562 COX7BP24311 80 aa1.49□□□□□ -2.17
PSPC1-208ENST00000635562 Q6ZRN7 208 aaPredicted RBP1.49□□□□□ -2.17
PSPC1-208ENST00000635562 SSC5DA1L4H1 1573 aa1.49□□□□□ -2.17
PSPC1-208ENST00000635562 ABCA1O95477 2261 aa1.49□□□□□ -2.17
PSPC1-208ENST00000635562 CADP27708 2225 aa1.48□□□□□ -2.17
PSPC1-208ENST00000635562 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
PSPC1-208ENST00000635562 IGKV2-28A0A075B6P5 120 aa1.48□□□□□ -2.17
PSPC1-208ENST00000635562 SPINK4O60575 86 aa1.48□□□□□ -2.17
PSPC1-208ENST00000635562 IGKV2D-28P01615 120 aa1.48□□□□□ -2.17
PSPC1-208ENST00000635562 PRR9Q5T870 116 aa1.48□□□□□ -2.17
PSPC1-208ENST00000635562 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.48□□□□□ -2.17
PSPC1-208ENST00000635562 BPTFQ12830 3046 aa1.48□□□□□ -2.17
PSPC1-208ENST00000635562 ETDCA0A1B0GVM5 59 aa1.47□□□□□ -2.17
PSPC1-208ENST00000635562 G3V318 75 aa1.47□□□□□ -2.17
PSPC1-208ENST00000635562 NCR3O14931 201 aa1.47□□□□□ -2.17
PSPC1-208ENST00000635562 C10orf99Q6UWK7 81 aa1.47□□□□□ -2.17
PSPC1-208ENST00000635562 Q6ZQY7 126 aa1.47□□□□□ -2.17
PSPC1-208ENST00000635562 CCL19Q99731 98 aa1.47□□□□□ -2.17
PSPC1-208ENST00000635562 LCE3DQ9BYE3 92 aa1.47□□□□□ -2.17
PSPC1-208ENST00000635562 GOLGA4Q13439 2230 aaKnown RBP1.47□□□□□ -2.17
PSPC1-208ENST00000635562 TECTAO75443 2155 aa1.47□□□□□ -2.17
PSPC1-208ENST00000635562 A0A096LNT2 108 aa1.46□□□□□ -2.18
PSPC1-208ENST00000635562 H0YGX0 51 aa1.46□□□□□ -2.18
PSPC1-208ENST00000635562 LY6G6CO95867 125 aa1.46□□□□□ -2.18
PSPC1-208ENST00000635562 GVQW2A0A096LPI5 108 aaPredicted RBP1.45□□□□□ -2.18
PSPC1-208ENST00000635562 IGKV2-24A0A0C4DH68 120 aa1.45□□□□□ -2.18
PSPC1-208ENST00000635562 CPSF4LA6NMK7 179 aaKnown RBP1.45□□□□□ -2.18
PSPC1-208ENST00000635562 FXYD6P3P58550 94 aa1.45□□□□□ -2.18
PSPC1-208ENST00000635562 HAMPP81172 84 aa1.45□□□□□ -2.18
PSPC1-208ENST00000635562 Q6ZRX8 168 aa1.45□□□□□ -2.18
PSPC1-208ENST00000635562 SMIM11BQ8TCY0 68 aa1.45□□□□□ -2.18
PSPC1-208ENST00000635562 PLAC4Q8WY50 150 aa1.45□□□□□ -2.18
PSPC1-208ENST00000635562 TIMM8BQ9Y5J9 83 aaPredicted RBP1.45□□□□□ -2.18
PSPC1-208ENST00000635562 NDUFA3O95167 84 aa1.44□□□□□ -2.18
PSPC1-208ENST00000635562 DEFB131BA0A096LNP1 70 aa1.43□□□□□ -2.18
PSPC1-208ENST00000635562 RPL38P63173 70 aaKnown RBP1.43□□□□□ -2.18
PSPC1-208ENST00000635562 SSBP3-AS1Q7Z2R9 100 aa1.43□□□□□ -2.18
PSPC1-208ENST00000635562 URB1O60287 2271 aaKnown RBP1.42□□□□□ -2.18
PSPC1-208ENST00000635562 PIN1P1O15428 100 aa1.42□□□□□ -2.18
PSPC1-208ENST00000635562 MRPL33O75394 65 aaKnown RBP1.42□□□□□ -2.18
PSPC1-208ENST00000635562 TMEM167BQ9NRX6 74 aa1.42□□□□□ -2.18
PSPC1-208ENST00000635562 ICE1Q9Y2F5 2266 aa1.42□□□□□ -2.18
PSPC1-208ENST00000635562 ANGP03950 147 aaKnown RBP1.41□□□□□ -2.18
PSPC1-208ENST00000635562 KRTAP10-10P60014 251 aa1.41□□□□□ -2.18
PSPC1-208ENST00000635562 IGFL1Q6UW32 110 aa1.41□□□□□ -2.18
PSPC1-208ENST00000635562 KNTC1P50748 2209 aa1.4□□□□□ -2.18
PSPC1-208ENST00000635562 SPTY2D1-AS1A0A0U1RR47 76 aa1.4□□□□□ -2.19
PSPC1-208ENST00000635562 CRIP1P50238 77 aa1.4□□□□□ -2.19
PSPC1-208ENST00000635562 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.19
PSPC1-208ENST00000635562 CNOT1A5YKK6 2376 aaKnown RBP1.4□□□□□ -2.19
PSPC1-208ENST00000635562 ASXL3Q9C0F0 2248 aa1.39□□□□□ -2.19
PSPC1-208ENST00000635562 SPINK13Q1W4C9 94 aa1.38□□□□□ -2.19
PSPC1-208ENST00000635562 UNQ6190/PRO20217Q6UXQ8 127 aa1.38□□□□□ -2.19
PSPC1-208ENST00000635562 CACNA1GO43497 2377 aa1.38□□□□□ -2.19
PSPC1-208ENST00000635562 ASCC3Q8N3C0 2202 aaKnown RBP1.38□□□□□ -2.19
PSPC1-208ENST00000635562 AHCTF1Q8WYP5 2266 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms