RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 ZNF843Q8N446 348 aa4.3□□□□□ -1.72
HDDC2-205ENST00000608456 RMI2Q96E14 147 aa4.3□□□□□ -1.72
HDDC2-205ENST00000608456 BBC3Q96PG8 261 aaPredicted RBP4.3□□□□□ -1.72
HDDC2-205ENST00000608456 C11orf68Q9H3H3 251 aaKnown RBP4.3□□□□□ -1.72
HDDC2-205ENST00000608456 CR1P17927 2039 aa4.29□□□□□ -1.72
HDDC2-205ENST00000608456 PRYO14603 147 aa4.29□□□□□ -1.72
HDDC2-205ENST00000608456 VPREB1P12018 145 aa4.29□□□□□ -1.72
HDDC2-205ENST00000608456 LINC00336Q6ZUF6 198 aa4.29□□□□□ -1.72
HDDC2-205ENST00000608456 IGF2RP11717 2491 aa4.28□□□□□ -1.72
HDDC2-205ENST00000608456 SPART-AS1P0CW21 52 aa4.28□□□□□ -1.72
HDDC2-205ENST00000608456 DAD1P61803 113 aa4.28□□□□□ -1.72
HDDC2-205ENST00000608456 ESRGQ1W209 222 aa4.28□□□□□ -1.72
HDDC2-205ENST00000608456 C9orf116Q5BN46 136 aaPredicted RBP4.28□□□□□ -1.72
HDDC2-205ENST00000608456 Q8NDZ9 215 aa4.28□□□□□ -1.72
HDDC2-205ENST00000608456 TM2D3Q9BRN9 247 aa4.28□□□□□ -1.72
HDDC2-205ENST00000608456 KCNQ1DNQ9H478 68 aa4.28□□□□□ -1.72
HDDC2-205ENST00000608456 DHRS4-AS1Q9P1J3 65 aa4.28□□□□□ -1.72
HDDC2-205ENST00000608456 C6orf48Q9UBA6 75 aa4.28□□□□□ -1.72
HDDC2-205ENST00000608456 MUC3AQ02505 3323 aa4.28□□□□□ -1.72
HDDC2-205ENST00000608456 ATMQ13315 3056 aa4.27□□□□□ -1.73
HDDC2-205ENST00000608456 NDUFB1O75438 58 aa4.27□□□□□ -1.73
HDDC2-205ENST00000608456 IGKV4-1P06312 121 aa4.27□□□□□ -1.73
HDDC2-205ENST00000608456 FUSP35637 526 aaKnown RBP eCLIP4.27□□□□□ -1.73
HDDC2-205ENST00000608456 C10orf25Q5T742 122 aa4.27□□□□□ -1.73
HDDC2-205ENST00000608456 Q6ZTC4 211 aa4.27□□□□□ -1.73
HDDC2-205ENST00000608456 KRTAP1-3Q8IUG1 177 aa4.27□□□□□ -1.73
HDDC2-205ENST00000608456 MAPK1IP1LQ8NDC0 245 aa4.27□□□□□ -1.73
HDDC2-205ENST00000608456 SNURFQ9Y675 71 aa4.27□□□□□ -1.73
HDDC2-205ENST00000608456 V9GYY9 64 aa4.27□□□□□ -1.73
HDDC2-205ENST00000608456 USP9YO00507 2555 aaPredicted RBP4.26□□□□□ -1.73
HDDC2-205ENST00000608456 M0R2N4 97 aa4.26□□□□□ -1.73
HDDC2-205ENST00000608456 TLX1NBP0CAT3 122 aa4.26□□□□□ -1.73
HDDC2-205ENST00000608456 Q1T7F1 81 aa4.26□□□□□ -1.73
HDDC2-205ENST00000608456 CYP4F30PQ9H0H9 118 aa4.26□□□□□ -1.73
HDDC2-205ENST00000608456 IGLV5-37A0A075B6J1 123 aa4.25□□□□□ -1.73
HDDC2-205ENST00000608456 CLPSL2Q6UWE3 100 aa4.25□□□□□ -1.73
HDDC2-205ENST00000608456 SPRR4Q96PI1 79 aa4.25□□□□□ -1.73
HDDC2-205ENST00000608456 CAMK2N2Q96S95 79 aa4.25□□□□□ -1.73
HDDC2-205ENST00000608456 WFDC10AQ9H1F0 79 aa4.25□□□□□ -1.73
HDDC2-205ENST00000608456 NOTCH3Q9UM47 2321 aa4.24□□□□□ -1.73
HDDC2-205ENST00000608456 DCHS1Q96JQ0 3298 aa4.24□□□□□ -1.73
HDDC2-205ENST00000608456 USP9XQ93008 2570 aaPredicted RBP4.24□□□□□ -1.73
HDDC2-205ENST00000608456 MYO9AB2RTY4 2548 aa4.24□□□□□ -1.73
HDDC2-205ENST00000608456 DMXL1Q9Y485 3027 aa4.24□□□□□ -1.73
HDDC2-205ENST00000608456 IGLV10-54A0A075B6I4 117 aa4.24□□□□□ -1.73
HDDC2-205ENST00000608456 A0A096LPF7 62 aa4.24□□□□□ -1.73
HDDC2-205ENST00000608456 H3BPC8 53 aa4.24□□□□□ -1.73
HDDC2-205ENST00000608456 KRTAP9-2Q9BYQ4 174 aa4.24□□□□□ -1.73
HDDC2-205ENST00000608456 KLK12Q9UKR0 248 aa4.24□□□□□ -1.73
HDDC2-205ENST00000608456 WNK1Q9H4A3 2382 aa4.23□□□□□ -1.73
HDDC2-205ENST00000608456 ETDCA0A1B0GVM5 59 aa4.23□□□□□ -1.73
HDDC2-205ENST00000608456 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
HDDC2-205ENST00000608456 KPRPQ5T749 579 aaPredicted RBP4.23□□□□□ -1.73
HDDC2-205ENST00000608456 KRTAP26-1Q6PEX3 210 aa4.23□□□□□ -1.73
HDDC2-205ENST00000608456 Q8NAQ8 132 aa4.23□□□□□ -1.73
HDDC2-205ENST00000608456 ZCCHC13Q8WW36 166 aaKnown RBP4.23□□□□□ -1.73
HDDC2-205ENST00000608456 hDV103S1A0JD37 113 aa4.22□□□□□ -1.73
HDDC2-205ENST00000608456 RPL37AP8A6NKH3 93 aa4.22□□□□□ -1.73
HDDC2-205ENST00000608456 SPRR1AP35321 89 aa4.22□□□□□ -1.73
HDDC2-205ENST00000608456 PRR15Q8IV56 129 aa4.22□□□□□ -1.73
HDDC2-205ENST00000608456 Q8NBF4 154 aa4.22□□□□□ -1.73
HDDC2-205ENST00000608456 CSMD1Q96PZ7 3565 aa4.21□□□□□ -1.74
HDDC2-205ENST00000608456 ANKRD17O75179 2603 aaKnown RBP4.21□□□□□ -1.74
HDDC2-205ENST00000608456 KRTAP9-6A0A140TA67 174 aa4.21□□□□□ -1.74
HDDC2-205ENST00000608456 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
HDDC2-205ENST00000608456 C1orf195Q5TG92 126 aa4.21□□□□□ -1.74
HDDC2-205ENST00000608456 Q8N377 158 aa4.21□□□□□ -1.74
HDDC2-205ENST00000608456 XAGE1AQ9HD64 81 aa4.21□□□□□ -1.74
HDDC2-205ENST00000608456 ACACBO00763 2458 aa4.21□□□□□ -1.74
HDDC2-205ENST00000608456 KRTAP10-9P60411 292 aa4.2□□□□□ -1.74
HDDC2-205ENST00000608456 SYCNQ0VAF6 134 aa4.2□□□□□ -1.74
HDDC2-205ENST00000608456 LINC01556Q5JQF7 62 aa4.2□□□□□ -1.74
HDDC2-205ENST00000608456 Q6ZRU5 148 aa4.2□□□□□ -1.74
HDDC2-205ENST00000608456 NKAPP1Q8N9T2 125 aa4.2□□□□□ -1.74
HDDC2-205ENST00000608456 SPANXA2-OT1Q8N9U9 137 aa4.2□□□□□ -1.74
HDDC2-205ENST00000608456 LINC00474Q9P2X8 69 aa4.2□□□□□ -1.74
HDDC2-205ENST00000608456 TLN2Q9Y4G6 2542 aa4.2□□□□□ -1.74
HDDC2-205ENST00000608456 KRTAP4-16G5E9R7 235 aaPredicted RBP4.19□□□□□ -1.74
HDDC2-205ENST00000608456 KRTAP1-1Q07627 177 aa4.19□□□□□ -1.74
HDDC2-205ENST00000608456 Q6ZRX8 168 aa4.19□□□□□ -1.74
HDDC2-205ENST00000608456 SCXQ7RTU7 201 aa4.19□□□□□ -1.74
HDDC2-205ENST00000608456 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
HDDC2-205ENST00000608456 NAV2Q8IVL1 2488 aa4.19□□□□□ -1.74
HDDC2-205ENST00000608456 ASPMQ8IZT6 3477 aa4.19□□□□□ -1.74
HDDC2-205ENST00000608456 IGLV8-61A0A075B6I0 122 aa4.18□□□□□ -1.74
HDDC2-205ENST00000608456 A0A1W2PNM2 257 aa4.18□□□□□ -1.74
HDDC2-205ENST00000608456 HCG22E2RYF7 251 aa4.18□□□□□ -1.74
HDDC2-205ENST00000608456 DEFB135Q30KP9 77 aa4.18□□□□□ -1.74
HDDC2-205ENST00000608456 C1orf137Q5JT78 98 aa4.18□□□□□ -1.74
HDDC2-205ENST00000608456 C15orf56Q8N910 161 aa4.18□□□□□ -1.74
HDDC2-205ENST00000608456 HIGD2AQ9BW72 106 aa4.18□□□□□ -1.74
HDDC2-205ENST00000608456 IGLV1-50A0A075B6I6 118 aa4.17□□□□□ -1.74
HDDC2-205ENST00000608456 MP68P56378 58 aa4.17□□□□□ -1.74
HDDC2-205ENST00000608456 Q6ZRP5 223 aa4.17□□□□□ -1.74
HDDC2-205ENST00000608456 WFDC11Q8NEX6 87 aa4.17□□□□□ -1.74
HDDC2-205ENST00000608456 C7orf33Q8WU49 177 aa4.17□□□□□ -1.74
HDDC2-205ENST00000608456 WWC2-AS2Q96NR7 200 aa4.17□□□□□ -1.74
HDDC2-205ENST00000608456 KRTAP4-12Q9BQ66 201 aa4.17□□□□□ -1.74
HDDC2-205ENST00000608456 LAMA5O15230 3695 aa4.17□□□□□ -1.74
HDDC2-205ENST00000608456 DSCR10P59022 87 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms