RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 AEBP2Q6ZN18 517 aaPredicted RBP15.75■□□□□ 0.11
HDDC2-205ENST00000608456 CHIC1Q5VXU3 224 aa15.72■□□□□ 0.11
HDDC2-205ENST00000608456 PHF23Q9BUL5 403 aaPredicted RBP13.79□□□□□ -0.2
HDDC2-205ENST00000608456 SENP3Q9H4L4 574 aaPredicted RBP13.41□□□□□ -0.26
HDDC2-205ENST00000608456 PLPPR3Q6T4P5 718 aa12.89□□□□□ -0.35
HDDC2-205ENST00000608456 NISCHQ9Y2I1 1504 aa12.56□□□□□ -0.4
HDDC2-205ENST00000608456 FOXD1Q16676 465 aa12.34□□□□□ -0.43
HDDC2-205ENST00000608456 PPP6R1Q9UPN7 881 aa12.04□□□□□ -0.48
HDDC2-205ENST00000608456 ADRA2BP18089 450 aa12.02□□□□□ -0.49
HDDC2-205ENST00000608456 PIAS4Q8N2W9 510 aaPredicted RBP11.7□□□□□ -0.54
HDDC2-205ENST00000608456 MSH5O43196 834 aa11.36□□□□□ -0.59
HDDC2-205ENST00000608456 PPP4R3CPQ6ZMV5 832 aa11.35□□□□□ -0.59
HDDC2-205ENST00000608456 KCNA4P22459 653 aa11.34□□□□□ -0.59
HDDC2-205ENST00000608456 NCBP3Q53F19 620 aaKnown RBP11.18□□□□□ -0.62
HDDC2-205ENST00000608456 SCAF1Q9H7N4 1312 aaKnown RBP11.12□□□□□ -0.63
HDDC2-205ENST00000608456 CNKSR2Q8WXI2 1034 aa11.02□□□□□ -0.65
HDDC2-205ENST00000608456 NPM3O75607 178 aaKnown RBP10.96□□□□□ -0.65
HDDC2-205ENST00000608456 SLC4A1APQ9BWU0 796 aaKnown RBP10.87□□□□□ -0.67
HDDC2-205ENST00000608456 DNAJC5BQ9UF47 199 aa10.81□□□□□ -0.68
HDDC2-205ENST00000608456 MAPK8IP2Q13387 824 aaPredicted RBP10.8□□□□□ -0.68
HDDC2-205ENST00000608456 EHMT2Q96KQ7 1210 aa10.76□□□□□ -0.69
HDDC2-205ENST00000608456 RNF216Q9NWF9 866 aaPredicted RBP10.75□□□□□ -0.69
HDDC2-205ENST00000608456 DMRT2Q9Y5R5 561 aa10.74□□□□□ -0.69
HDDC2-205ENST00000608456 ZCCHC6Q5VYS8 1495 aaKnown RBP10.68□□□□□ -0.7
HDDC2-205ENST00000608456 HRCP23327 699 aa10.66□□□□□ -0.7
HDDC2-205ENST00000608456 HOXD11P31277 338 aaPredicted RBP10.65□□□□□ -0.7
HDDC2-205ENST00000608456 CCDC180Q9P1Z9 1646 aa10.65□□□□□ -0.7
HDDC2-205ENST00000608456 CSRNP3Q8WYN3 585 aa10.61□□□□□ -0.71
HDDC2-205ENST00000608456 SUPT5HO00267 1087 aaKnown RBP10.51□□□□□ -0.73
HDDC2-205ENST00000608456 DCAF1Q9Y4B6 1507 aa10.51□□□□□ -0.73
HDDC2-205ENST00000608456 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
HDDC2-205ENST00000608456 FOXD4L1Q9NU39 408 aa10.44□□□□□ -0.74
HDDC2-205ENST00000608456 ZBTB22O15209 634 aa10.43□□□□□ -0.74
HDDC2-205ENST00000608456 PELP1Q8IZL8 1130 aaKnown RBP10.39□□□□□ -0.75
HDDC2-205ENST00000608456 POTEDQ86YR6 584 aa10.37□□□□□ -0.75
HDDC2-205ENST00000608456 ZEB1P37275 1124 aaPredicted RBP10.36□□□□□ -0.75
HDDC2-205ENST00000608456 MYO15BQ96JP2 1530 aa10.33□□□□□ -0.76
HDDC2-205ENST00000608456 PCGF6Q9BYE7 350 aa10.31□□□□□ -0.76
HDDC2-205ENST00000608456 TRIM26Q12899 539 aaPredicted RBP10.29□□□□□ -0.76
HDDC2-205ENST00000608456 SLC4A2P04920 1241 aa10.28□□□□□ -0.76
HDDC2-205ENST00000608456 MYCNP04198 464 aaPredicted RBP10.17□□□□□ -0.78
HDDC2-205ENST00000608456 ATXN8OSP0DMR3 200 aa10.12□□□□□ -0.79
HDDC2-205ENST00000608456 DCAF8L1A6NGE4 600 aa10.1□□□□□ -0.79
HDDC2-205ENST00000608456 MYT1Q01538 1121 aa10.08□□□□□ -0.8
HDDC2-205ENST00000608456 ABCC9O60706 1549 aa10.07□□□□□ -0.8
HDDC2-205ENST00000608456 PPARGC1BQ86YN6 1023 aaKnown RBP10.06□□□□□ -0.8
HDDC2-205ENST00000608456 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.05□□□□□ -0.83e-16■■■■□ 21.2
HDDC2-205ENST00000608456 LOC105371045A0A1W2PR82 267 aa10.03□□□□□ -0.8
HDDC2-205ENST00000608456 DCAF8L2P0C7V8 631 aa10.01□□□□□ -0.81
HDDC2-205ENST00000608456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10□□□□□ -0.81
HDDC2-205ENST00000608456 HNRNPUL2Q1KMD3 747 aaKnown RBP10□□□□□ -0.81
HDDC2-205ENST00000608456 RSF1Q96T23 1441 aaPredicted RBP9.99□□□□□ -0.81
HDDC2-205ENST00000608456 RB1CC1Q8TDY2 1594 aa9.98□□□□□ -0.81
HDDC2-205ENST00000608456 SAMD1Q6SPF0 538 aaPredicted RBP9.95□□□□□ -0.82
HDDC2-205ENST00000608456 TRIM41Q8WV44 630 aa9.94□□□□□ -0.82
HDDC2-205ENST00000608456 U3KPZ7 1027 aaPredicted RBP9.94□□□□□ -0.82
HDDC2-205ENST00000608456 APLP2Q06481 763 aa9.86□□□□□ -0.83
HDDC2-205ENST00000608456 NACADO15069 1562 aa9.81□□□□□ -0.84
HDDC2-205ENST00000608456 CENPBP07199 599 aaPredicted RBP9.81□□□□□ -0.84
HDDC2-205ENST00000608456 WRNQ14191 1432 aaPredicted RBP eCLIP9.81□□□□□ -0.84
HDDC2-205ENST00000608456 ACIN1Q9UKV3 1341 aaKnown RBP9.81□□□□□ -0.84
HDDC2-205ENST00000608456 ATF5Q9Y2D1 282 aaPredicted RBP9.77□□□□□ -0.85
HDDC2-205ENST00000608456 EEA1Q15075 1411 aa9.73□□□□□ -0.85
HDDC2-205ENST00000608456 RNF39Q9H2S5 420 aa9.73□□□□□ -0.85
HDDC2-205ENST00000608456 SCRIBQ14160 1630 aa9.71□□□□□ -0.85
HDDC2-205ENST00000608456 CCER1Q8TC90 406 aaPredicted RBP9.69□□□□□ -0.86
HDDC2-205ENST00000608456 DIEXFQ68CQ4 756 aaKnown RBP9.68□□□□□ -0.86
HDDC2-205ENST00000608456 TNIKQ9UKE5 1360 aa9.67□□□□□ -0.86
HDDC2-205ENST00000608456 CLSPNQ9HAW4 1339 aa9.67□□□□□ -0.86
HDDC2-205ENST00000608456 C1QBPQ07021 282 aaKnown RBP9.67□□□□□ -0.86
HDDC2-205ENST00000608456 BAZ1AQ9NRL2 1556 aaPredicted RBP9.67□□□□□ -0.86
HDDC2-205ENST00000608456 ZNF219Q9P2Y4 722 aaPredicted RBP9.65□□□□□ -0.86
HDDC2-205ENST00000608456 EIF4G1Q04637 1599 aaKnown RBP9.64□□□□□ -0.87
HDDC2-205ENST00000608456 MROH2BQ7Z745 1585 aa9.64□□□□□ -0.87
HDDC2-205ENST00000608456 NEUROD1Q13562 356 aa9.63□□□□□ -0.87
HDDC2-205ENST00000608456 ZNF316A6NFI3 1004 aaPredicted RBP9.61□□□□□ -0.87
HDDC2-205ENST00000608456 FAM9AQ8IZU1 332 aaPredicted RBP9.61□□□□□ -0.87
HDDC2-205ENST00000608456 CECR2Q9BXF3 1484 aa9.6□□□□□ -0.87
HDDC2-205ENST00000608456 TOP2AP11388 1531 aaKnown RBP9.58□□□□□ -0.88
HDDC2-205ENST00000608456 GTF3C3Q9Y5Q9 886 aa9.58□□□□□ -0.88
HDDC2-205ENST00000608456 CEP162Q5TB80 1403 aa9.56□□□□□ -0.88
HDDC2-205ENST00000608456 WIZO95785 1651 aa9.55□□□□□ -0.88
HDDC2-205ENST00000608456 FKBP8Q14318 412 aa9.54□□□□□ -0.88
HDDC2-205ENST00000608456 SPINK5Q9NQ38 1064 aaPredicted RBP9.53□□□□□ -0.88
HDDC2-205ENST00000608456 GOLGA3Q08378 1498 aa9.51□□□□□ -0.89
HDDC2-205ENST00000608456 CAPN15O75808 1086 aa9.49□□□□□ -0.89
HDDC2-205ENST00000608456 CCDC88BA6NC98 1476 aa9.48□□□□□ -0.89
HDDC2-205ENST00000608456 TRHP20396 242 aaPredicted RBP9.48□□□□□ -0.89
HDDC2-205ENST00000608456 SMARCA2P51531 1590 aa9.47□□□□□ -0.89
HDDC2-205ENST00000608456 TTBK1Q5TCY1 1321 aaPredicted RBP9.47□□□□□ -0.89
HDDC2-205ENST00000608456 BAZ1BQ9UIG0 1483 aaKnown RBP9.47□□□□□ -0.89
HDDC2-205ENST00000608456 CEP164Q9UPV0 1460 aa9.46□□□□□ -0.9
HDDC2-205ENST00000608456 SMARCA4P51532 1647 aa9.45□□□□□ -0.9
HDDC2-205ENST00000608456 KIF21BO75037 1637 aa9.45□□□□□ -0.9
HDDC2-205ENST00000608456 FBLN2P98095 1184 aa9.43□□□□□ -0.9
HDDC2-205ENST00000608456 PEG3Q9GZU2 1588 aa9.42□□□□□ -0.9
HDDC2-205ENST00000608456 POLA2Q14181 598 aa9.42□□□□□ -0.9
HDDC2-205ENST00000608456 ZBTB12Q9Y330 459 aaPredicted RBP9.42□□□□□ -0.9
HDDC2-205ENST00000608456 MKRN4PQ13434 485 aaPredicted RBP9.41□□□□□ -0.9
HDDC2-205ENST00000608456 AMER1Q5JTC6 1135 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms