RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 RBMY1DP0C7P1 496 aaKnown RBP3.23□□□□□ -1.89
ATXN3-246ENST00000557030 CRYGAP11844 174 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 CR1P17927 2039 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 HIST1H4AP62805 103 aaKnown RBP3.23□□□□□ -1.89
ATXN3-246ENST00000557030 COX6A2Q02221 97 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 DEFB113Q30KQ7 82 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 SOSTDC1Q6X4U4 206 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 LINC00612Q8N6U2 182 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-246ENST00000557030 SMCR5Q8TEV8 140 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 COX7B2Q8TF08 81 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 C4orf3Q8WVX3 66 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 TMEM243Q9BU79 118 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 CDC42SE2Q9NRR3 84 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 PRR34Q9NV39 138 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 ACANP16112 2415 aa3.23□□□□□ -1.89
ATXN3-246ENST00000557030 TRGV1A0A0A0MS02 117 aa3.22□□□□□ -1.89
ATXN3-246ENST00000557030 RPL37AP8A6NKH3 93 aa3.22□□□□□ -1.89
ATXN3-246ENST00000557030 IBA57-AS1B1ANH7 110 aa3.22□□□□□ -1.89
ATXN3-246ENST00000557030 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
ATXN3-246ENST00000557030 RPL18AQ02543 176 aaKnown RBP3.22□□□□□ -1.89
ATXN3-246ENST00000557030 ATP5EP2Q5VTU8 51 aa3.22□□□□□ -1.89
ATXN3-246ENST00000557030 Q8N2B8 174 aa3.22□□□□□ -1.89
ATXN3-246ENST00000557030 OBSCN-AS1Q96MR7 158 aa3.22□□□□□ -1.89
ATXN3-246ENST00000557030 SND1-IT1Q9HBX3 110 aa3.22□□□□□ -1.89
ATXN3-246ENST00000557030 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.22□□□□□ -1.894e-12■■■□□ 18.3
ATXN3-246ENST00000557030 PRRC2AP48634 2157 aaKnown RBP3.22□□□□□ -1.89
ATXN3-246ENST00000557030 PCLOQ9Y6V0 5065 aa3.21□□□□□ -1.9
ATXN3-246ENST00000557030 TRBV6-4A0A1B0GX49 114 aa3.21□□□□□ -1.9
ATXN3-246ENST00000557030 LINC00158P58513 81 aa3.21□□□□□ -1.9
ATXN3-246ENST00000557030 TMEM258P61165 79 aa3.21□□□□□ -1.9
ATXN3-246ENST00000557030 DEFB114Q30KQ6 69 aa3.21□□□□□ -1.9
ATXN3-246ENST00000557030 C9orf66Q5T8R8 295 aa3.21□□□□□ -1.9
ATXN3-246ENST00000557030 REG3GQ6UW15 175 aa3.21□□□□□ -1.9
ATXN3-246ENST00000557030 MIR7-3HGQ8N6C7 128 aa3.21□□□□□ -1.9
ATXN3-246ENST00000557030 SERP2Q8N6R1 65 aa3.21□□□□□ -1.9
ATXN3-246ENST00000557030 OR13C6PQ8NH95 151 aa3.21□□□□□ -1.9
ATXN3-246ENST00000557030 SMR3AQ99954 134 aa3.21□□□□□ -1.9
ATXN3-246ENST00000557030 KLK5Q9Y337 293 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-246ENST00000557030 NBEAL2Q6ZNJ1 2754 aa3.21□□□□□ -1.9
ATXN3-246ENST00000557030 FN1P02751 2386 aaKnown RBP3.2□□□□□ -1.9
ATXN3-246ENST00000557030 JMJD7-PLA2G4BH0Y9G9 81 aa3.2□□□□□ -1.9
ATXN3-246ENST00000557030 LINC00694P0DN24 101 aa3.2□□□□□ -1.9
ATXN3-246ENST00000557030 NTM-AS1Q6ZSK4 140 aa3.2□□□□□ -1.9
ATXN3-246ENST00000557030 TMEM86BQ8N661 226 aa3.2□□□□□ -1.9
ATXN3-246ENST00000557030 SMIM11BQ8TCY0 68 aa3.2□□□□□ -1.9
ATXN3-246ENST00000557030 C16orf74Q96GX8 76 aa3.2□□□□□ -1.9
ATXN3-246ENST00000557030 ESM1Q9NQ30 184 aa3.2□□□□□ -1.9
ATXN3-246ENST00000557030 ORMDL1Q9P0S3 153 aa3.2□□□□□ -1.9
ATXN3-246ENST00000557030 Q9UF83 564 aa3.2□□□□□ -1.9
ATXN3-246ENST00000557030 C22orf24Q9Y442 160 aa3.2□□□□□ -1.9
ATXN3-246ENST00000557030 SVEP1Q4LDE5 3571 aa3.2□□□□□ -1.9
ATXN3-246ENST00000557030 CSPG4Q6UVK1 2322 aa3.2□□□□□ -1.9
ATXN3-246ENST00000557030 MUC4Q99102 2169 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 MAP1AP78559 2803 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-246ENST00000557030 CUBNO60494 3623 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 IGKV2-28A0A075B6P5 120 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 NDUFC2-KCTD14E9PQ53 114 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 H3BQ85 93 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 BCE1O60756 84 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 LY6G6DO95868 133 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 IGKV2D-28P01615 120 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 CCKP06307 115 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 CCL18P55774 89 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 DEFB136Q30KP8 78 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 C5orf47Q569G3 176 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 C1orf158Q8N1D5 194 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 LINC00337Q8N6G1 96 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 TYMSOSQ8TAI1 123 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 C14orf132Q9NPU4 83 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 XCL2Q9UBD3 114 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 ZANQ9Y493 2812 aa3.19□□□□□ -1.9
ATXN3-246ENST00000557030 ATRQ13535 2644 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 TRGV2A0A075B6R0 118 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 IGHV3OR16-9A0A0B4J2B5 98 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 TRBV10-3A0A0K0K1G6 114 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 hADV29S1A0JD25 119 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 LECT2O14960 151 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 PRM2P04554 102 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 KRTAP1-4P0C5Y4 121 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 Q6ZR54 194 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 Q6ZTI0 123 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 WFDC11Q8NEX6 87 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 MUC7Q8TAX7 377 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 LINC00167Q96N53 147 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 TOMM7Q9P0U1 55 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 STAB1Q9NY15 2570 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 COL6A5A8TX70 2615 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 JMJD1CQ15652 2540 aa3.18□□□□□ -1.9
ATXN3-246ENST00000557030 MXRA5Q9NR99 2828 aa3.17□□□□□ -1.9
ATXN3-246ENST00000557030 TRBV6-8A0A0A6YYG3 113 aa3.17□□□□□ -1.9
ATXN3-246ENST00000557030 TRGV4A0A0C4DH28 118 aa3.17□□□□□ -1.9
ATXN3-246ENST00000557030 TMEM256-PLSCR3K7ERE1 68 aa3.17□□□□□ -1.9
ATXN3-246ENST00000557030 NDUFC2O95298 119 aa3.17□□□□□ -1.9
ATXN3-246ENST00000557030 COX17Q14061 63 aa3.17□□□□□ -1.9
ATXN3-246ENST00000557030 SS18Q15532 418 aa3.17□□□□□ -1.9
ATXN3-246ENST00000557030 Q8IZM0 81 aa3.17□□□□□ -1.9
ATXN3-246ENST00000557030 C3orf56Q8N813 242 aa3.17□□□□□ -1.9
ATXN3-246ENST00000557030 CSNK1G2-AS1Q8NCQ2 148 aa3.17□□□□□ -1.9
ATXN3-246ENST00000557030 NOP10Q9NPE3 64 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms