RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 SPTSSAQ969W0 71 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 SCN3BQ9NY72 215 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 SPCS1Q9Y6A9 102 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 LINC00312Q9Y6C7 94 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 SPHKAPQ2M3C7 1700 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 TOGARAM1Q9Y4F4 1720 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 DEPDC5O75140 1603 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 NEXMIFQ5QGS0 1516 aa-0.39□□□□□ -2.47
SCFD1-214ENST00000554819 NHSQ6T4R5 1651 aa-0.4□□□□□ -2.47
SCFD1-214ENST00000554819 DIP2CQ9Y2E4 1556 aa-0.4□□□□□ -2.47
SCFD1-214ENST00000554819 ERVK-7P63135 1459 aa-0.4□□□□□ -2.47
SCFD1-214ENST00000554819 NCOA2Q15596 1464 aa-0.4□□□□□ -2.47
SCFD1-214ENST00000554819 ZNF518AQ6AHZ1 1483 aa-0.4□□□□□ -2.47
SCFD1-214ENST00000554819 SUPT6HQ7KZ85 1726 aaKnown RBP-0.4□□□□□ -2.47
SCFD1-214ENST00000554819 UBR1Q8IWV7 1749 aa-0.4□□□□□ -2.47
SCFD1-214ENST00000554819 GUCA1AP43080 201 aaPredicted RBP-0.4□□□□□ -2.47
SCFD1-214ENST00000554819 WFDC9Q8NEX5 89 aa-0.4□□□□□ -2.47
SCFD1-214ENST00000554819 SPTSSBQ8NFR3 76 aa-0.4□□□□□ -2.47
SCFD1-214ENST00000554819 TTTY10Q9BZA0 68 aa-0.4□□□□□ -2.47
SCFD1-214ENST00000554819 KIF21BO75037 1637 aa-0.4□□□□□ -2.47
SCFD1-214ENST00000554819 TARBP1Q13395 1621 aaKnown RBP-0.4□□□□□ -2.47
SCFD1-214ENST00000554819 RGPD1P0DJD0 1748 aa-0.41□□□□□ -2.47
SCFD1-214ENST00000554819 NRAPQ86VF7 1730 aa-0.41□□□□□ -2.47
SCFD1-214ENST00000554819 MADDQ8WXG6 1647 aa-0.41□□□□□ -2.47
SCFD1-214ENST00000554819 LTN1O94822 1766 aa-0.41□□□□□ -2.47
SCFD1-214ENST00000554819 TRPM2O94759 1503 aa-0.41□□□□□ -2.48
SCFD1-214ENST00000554819 K7ERU9 68 aa-0.41□□□□□ -2.48
SCFD1-214ENST00000554819 BCE1O60756 84 aa-0.41□□□□□ -2.48
SCFD1-214ENST00000554819 SIX6O95475 246 aa-0.41□□□□□ -2.48
SCFD1-214ENST00000554819 DEFB1P60022 68 aa-0.41□□□□□ -2.48
SCFD1-214ENST00000554819 DEFB124Q8NES8 71 aa-0.41□□□□□ -2.48
SCFD1-214ENST00000554819 LINC01600Q96MT4 127 aa-0.41□□□□□ -2.48
SCFD1-214ENST00000554819 KIF1AQ12756 1690 aa-0.41□□□□□ -2.48
SCFD1-214ENST00000554819 PREX1Q8TCU6 1659 aa-0.41□□□□□ -2.48
SCFD1-214ENST00000554819 ABCC5O15440 1437 aa-0.41□□□□□ -2.48
SCFD1-214ENST00000554819 SBF2Q86WG5 1849 aa-0.41□□□□□ -2.48
SCFD1-214ENST00000554819 PLXNC1O60486 1568 aa-0.41□□□□□ -2.48
SCFD1-214ENST00000554819 CEP152O94986 1710 aa-0.41□□□□□ -2.48
SCFD1-214ENST00000554819 MRC1P22897 1456 aa-0.41□□□□□ -2.48
SCFD1-214ENST00000554819 DUOX2Q9NRD8 1548 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 UGGT2Q9NYU1 1516 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 CROCC2H7BZ55 1655 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 BTAF1O14981 1849 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 PSME4Q14997 1843 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 PARP14Q460N5 1801 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 I3L2K1 104 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 SNCGO76070 127 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 S100A7L2Q5SY68 101 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 KCNRGQ8N5I3 272 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 SDF2Q99470 211 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 SEC11CQ9BY50 192 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 TMEM191AQ9H0A3 160 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 AGPAT4-IT1Q9H0P7 198 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 NPVFQ9HCQ7 196 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 R4GMQ9 66 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 MYOM3Q5VTT5 1437 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 LRRC9Q6ZRR7 1453 aa-0.42□□□□□ -2.48
SCFD1-214ENST00000554819 ARFGEF1Q9Y6D6 1849 aa-0.43□□□□□ -2.48
SCFD1-214ENST00000554819 IQGAP1P46940 1657 aa-0.43□□□□□ -2.48
SCFD1-214ENST00000554819 ALS2Q96Q42 1657 aa-0.43□□□□□ -2.48
SCFD1-214ENST00000554819 ERICH3Q5RHP9 1530 aa-0.43□□□□□ -2.48
SCFD1-214ENST00000554819 HCG22E2RYF7 251 aa-0.43□□□□□ -2.48
SCFD1-214ENST00000554819 M0R135 149 aa-0.43□□□□□ -2.48
SCFD1-214ENST00000554819 PPP1R17O96001 155 aa-0.43□□□□□ -2.48
SCFD1-214ENST00000554819 RPS25P62851 125 aaKnown RBP-0.43□□□□□ -2.48
SCFD1-214ENST00000554819 SMIM4Q8WVI0 70 aa-0.43□□□□□ -2.48
SCFD1-214ENST00000554819 LZICQ8WZA0 190 aa-0.43□□□□□ -2.48
SCFD1-214ENST00000554819 TP53AIP1Q9HCN2 124 aa-0.43□□□□□ -2.48
SCFD1-214ENST00000554819 COPZ2Q9P299 210 aa-0.43□□□□□ -2.48
SCFD1-214ENST00000554819 CFTRP13569 1480 aa-0.43□□□□□ -2.48
SCFD1-214ENST00000554819 AGLP35573 1532 aa-0.43□□□□□ -2.48
SCFD1-214ENST00000554819 DDX60LQ5H9U9 1706 aaKnown RBP-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 MON2Q7Z3U7 1717 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 ABCA8O94911 1581 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 SCAPERQ9BY12 1400 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 ADCY10Q96PN6 1610 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 FXYD6-FXYD2A0A087WZ82 144 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 TRAV13-2A0A0B4J235 113 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 S100A3P33764 101 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 COPZ1P61923 177 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 DCDP81605 110 aaKnown RBP-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 SMIM21Q3B7S5 101 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 TSTD1Q8NFU3 115 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 ANP32BQ92688 251 aaKnown RBP-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 TCEAL4Q96EI5 215 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 AMELXQ99217 191 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 TPT1P8Q9HAU6 139 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 CCDC167Q9P0B6 97 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 LENEPQ9Y5L5 61 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 DOCK2Q92608 1830 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 POLA1P09884 1462 aaPredicted RBP-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 MAGI1Q96QZ7 1491 aaPredicted RBP-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 FYCO1Q9BQS8 1478 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 GOLGA4Q13439 2230 aaKnown RBP-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 C3P01024 1663 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 SHPRHQ149N8 1683 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 CPS1P31327 1500 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 DDX60Q8IY21 1712 aaKnown RBP-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 MYO5CQ9NQX4 1742 aa-0.44□□□□□ -2.48
SCFD1-214ENST00000554819 CRYBG1Q9Y4K1 1723 aa-0.44□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms